RNA–Protein interactions for RNA: ENST00000419459.1

LINC00642-201, long intergenic non-protein coding RNA 642, humanhuman

TSL 2 BASIC

Gene LINC00642, Length 2,026 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00642-201ENST00000419459 KIAA1671Q9BY89 1806 aa13.58□□□□□ -0.24
LINC00642-201ENST00000419459 CCT8L1PA6NM43 557 aa13.57□□□□□ -0.24
LINC00642-201ENST00000419459 FOXN3O00409 490 aaPredicted RBP13.57□□□□□ -0.24
LINC00642-201ENST00000419459 INPPL1O15357 1258 aa13.57□□□□□ -0.24
LINC00642-201ENST00000419459 HCRTO43612 131 aa13.57□□□□□ -0.24
LINC00642-201ENST00000419459 CYP3A5P20815 502 aa13.57□□□□□ -0.24
LINC00642-201ENST00000419459 LRPAP1P30533 357 aa13.57□□□□□ -0.24
LINC00642-201ENST00000419459 BRCC3P46736 316 aa13.57□□□□□ -0.24
LINC00642-201ENST00000419459 JAM2P57087 298 aa13.57□□□□□ -0.24
LINC00642-201ENST00000419459 ELF3P78545 371 aaPredicted RBP13.57□□□□□ -0.24
LINC00642-201ENST00000419459 MYO1EQ12965 1108 aa13.57□□□□□ -0.24
LINC00642-201ENST00000419459 ERMARDQ5T6L9 678 aa13.57□□□□□ -0.24
LINC00642-201ENST00000419459 COLGALT2Q8IYK4 626 aa13.57□□□□□ -0.24
LINC00642-201ENST00000419459 CCDC26Q8TAB7 109 aa13.57□□□□□ -0.24
LINC00642-201ENST00000419459 TLCD1Q96CP7 247 aa13.57□□□□□ -0.24
LINC00642-201ENST00000419459 FAM193BQ96PV7 902 aaPredicted RBP13.57□□□□□ -0.24
LINC00642-201ENST00000419459 YME1L1Q96TA2 773 aa13.57□□□□□ -0.24
LINC00642-201ENST00000419459 FAM129AQ9BZQ8 928 aa13.57□□□□□ -0.24
LINC00642-201ENST00000419459 NIF3L1Q9GZT8 377 aa13.57□□□□□ -0.24
LINC00642-201ENST00000419459 SDCBP2Q9H190 292 aa13.57□□□□□ -0.24
LINC00642-201ENST00000419459 HMGXB4Q9UGU5 601 aa13.57□□□□□ -0.24
LINC00642-201ENST00000419459 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.57□□□□□ -0.24
LINC00642-201ENST00000419459 TIMM13Q9Y5L4 95 aaPredicted RBP13.57□□□□□ -0.24
LINC00642-201ENST00000419459 KPNA7A9QM74 516 aa13.57□□□□□ -0.24
LINC00642-201ENST00000419459 GFPT2O94808 682 aa13.57□□□□□ -0.24
LINC00642-201ENST00000419459 GBP2P32456 591 aaPredicted RBP13.57□□□□□ -0.24
LINC00642-201ENST00000419459 BCAR1P56945 870 aa13.57□□□□□ -0.24
LINC00642-201ENST00000419459 PPP2R5EQ16537 467 aa13.57□□□□□ -0.24
LINC00642-201ENST00000419459 FAM109BQ6ICB4 259 aaPredicted RBP13.57□□□□□ -0.24
LINC00642-201ENST00000419459 TMC3Q7Z5M5 1100 aa13.57□□□□□ -0.24
LINC00642-201ENST00000419459 KLHL7Q8IXQ5 586 aa13.57□□□□□ -0.24
LINC00642-201ENST00000419459 XPO6Q96QU8 1125 aaKnown RBP13.57□□□□□ -0.24
LINC00642-201ENST00000419459 RC3H2Q9HBD1 1191 aaKnown RBP13.57□□□□□ -0.24
LINC00642-201ENST00000419459 NOD2Q9HC29 1040 aa13.57□□□□□ -0.24
LINC00642-201ENST00000419459 FBXL5Q9UKA1 691 aa13.57□□□□□ -0.24
LINC00642-201ENST00000419459 SLC12A4Q9UP95 1085 aa13.57□□□□□ -0.24
LINC00642-201ENST00000419459 BZW2Q9Y6E2 419 aaKnown RBP13.57□□□□□ -0.24
LINC00642-201ENST00000419459 VWA8A3KMH1 1905 aa13.57□□□□□ -0.24
LINC00642-201ENST00000419459 SART1O43290 800 aaKnown RBP13.56□□□□□ -0.24
LINC00642-201ENST00000419459 EFCAB14O75071 495 aa13.56□□□□□ -0.24
LINC00642-201ENST00000419459 GJB5O95377 273 aa13.56□□□□□ -0.24
LINC00642-201ENST00000419459 KRT5P13647 590 aa13.56□□□□□ -0.24
LINC00642-201ENST00000419459 TAF6P49848 677 aa13.56□□□□□ -0.24
LINC00642-201ENST00000419459 GCNT1Q02742 428 aa13.56□□□□□ -0.24
LINC00642-201ENST00000419459 TMEM270Q6UE05 265 aa13.56□□□□□ -0.24
LINC00642-201ENST00000419459 LRRC43Q8N309 656 aa13.56□□□□□ -0.24
LINC00642-201ENST00000419459 LRRC52Q8N7C0 313 aa13.56□□□□□ -0.24
LINC00642-201ENST00000419459 UBLCP1Q8WVY7 318 aaPredicted RBP13.56□□□□□ -0.24
LINC00642-201ENST00000419459 ZNF689Q96CS4 500 aaPredicted RBP13.56□□□□□ -0.24
LINC00642-201ENST00000419459 KANSL3Q9P2N6 904 aa13.56□□□□□ -0.24
LINC00642-201ENST00000419459 NOVA2Q9UNW9 492 aaKnown RBP13.56□□□□□ -0.24
LINC00642-201ENST00000419459 NR2E3Q9Y5X4 410 aa13.56□□□□□ -0.24
LINC00642-201ENST00000419459 TSC2P49815 1807 aa13.56□□□□□ -0.24
LINC00642-201ENST00000419459 LCHNA4D1U4 455 aa13.56□□□□□ -0.24
LINC00642-201ENST00000419459 GRXCR1A8MXD5 290 aa13.56□□□□□ -0.24
LINC00642-201ENST00000419459 KCNK3O14649 394 aa13.56□□□□□ -0.24
LINC00642-201ENST00000419459 NRP1O14786 923 aa13.56□□□□□ -0.24
LINC00642-201ENST00000419459 CYP26A1O43174 497 aa13.56□□□□□ -0.24
LINC00642-201ENST00000419459 HOXA2O43364 376 aa13.56□□□□□ -0.24
LINC00642-201ENST00000419459 ATICP31939 592 aa13.56□□□□□ -0.24
LINC00642-201ENST00000419459 RABGGTBP53611 331 aa13.56□□□□□ -0.24
LINC00642-201ENST00000419459 MFAP3P55082 362 aa13.56□□□□□ -0.24
LINC00642-201ENST00000419459 MAGOHP61326 146 aaKnown RBP13.56□□□□□ -0.24
LINC00642-201ENST00000419459 BTG3Q14201 252 aaPredicted RBP13.56□□□□□ -0.24
LINC00642-201ENST00000419459 SOWAHAQ2M3V2 549 aa13.56□□□□□ -0.24
LINC00642-201ENST00000419459 SPRED3Q2MJR0 410 aa13.56□□□□□ -0.24
LINC00642-201ENST00000419459 TIGD5Q53EQ6 642 aa13.56□□□□□ -0.24
LINC00642-201ENST00000419459 CD300LGQ6UXG3 332 aa13.56□□□□□ -0.24
LINC00642-201ENST00000419459 RASGEF1CQ8N431 466 aa13.56□□□□□ -0.24
LINC00642-201ENST00000419459 MAGOHBQ96A72 148 aaKnown RBP13.56□□□□□ -0.24
LINC00642-201ENST00000419459 B3GALT6Q96L58 329 aa13.56□□□□□ -0.24
LINC00642-201ENST00000419459 ZNF560Q96MR9 790 aa13.56□□□□□ -0.24
LINC00642-201ENST00000419459 MRPL45Q9BRJ2 306 aaKnown RBP13.56□□□□□ -0.24
LINC00642-201ENST00000419459 ZBED2Q9BTP6 218 aa13.56□□□□□ -0.24
LINC00642-201ENST00000419459 STK33Q9BYT3 514 aa13.56□□□□□ -0.24
LINC00642-201ENST00000419459 CCDC134Q9H6E4 229 aa13.56□□□□□ -0.24
LINC00642-201ENST00000419459 CISHQ9NSE2 258 aa13.56□□□□□ -0.24
LINC00642-201ENST00000419459 CNOT8Q9UFF9 292 aaKnown RBP13.56□□□□□ -0.24
LINC00642-201ENST00000419459 NME7Q9Y5B8 376 aa13.56□□□□□ -0.24
LINC00642-201ENST00000419459 SLC4A7Q9Y6M7 1214 aa13.56□□□□□ -0.24
LINC00642-201ENST00000419459 MYO9BQ13459 2157 aa13.55□□□□□ -0.24
LINC00642-201ENST00000419459 ATP2A2P16615 1042 aaKnown RBP13.55□□□□□ -0.24
LINC00642-201ENST00000419459 ACO1P21399 889 aaKnown RBP13.55□□□□□ -0.24
LINC00642-201ENST00000419459 SSTR3P32745 418 aaPredicted RBP13.55□□□□□ -0.24
LINC00642-201ENST00000419459 SLC11A1P49279 550 aa13.55□□□□□ -0.24
LINC00642-201ENST00000419459 KLHL30Q0D2K2 578 aa13.55□□□□□ -0.24
LINC00642-201ENST00000419459 SHHQ15465 462 aa13.55□□□□□ -0.24
LINC00642-201ENST00000419459 TRADDQ15628 312 aa13.55□□□□□ -0.24
LINC00642-201ENST00000419459 KRT71Q3SY84 523 aa13.55□□□□□ -0.24
LINC00642-201ENST00000419459 SPOUT1Q5T280 376 aaKnown RBP13.55□□□□□ -0.24
LINC00642-201ENST00000419459 SPRED2Q7Z698 418 aa13.55□□□□□ -0.24
LINC00642-201ENST00000419459 SLC47A2Q86VL8 602 aa13.55□□□□□ -0.24
LINC00642-201ENST00000419459 BCL7CQ8WUZ0 217 aaPredicted RBP13.55□□□□□ -0.24
LINC00642-201ENST00000419459 HERVK_113Q902F9 699 aa13.55□□□□□ -0.24
LINC00642-201ENST00000419459 SHC3Q92529 594 aa13.55□□□□□ -0.24
LINC00642-201ENST00000419459 TWNKQ96RR1 684 aa13.55□□□□□ -0.24
LINC00642-201ENST00000419459 TSPAN18Q96SJ8 248 aa13.55□□□□□ -0.24
LINC00642-201ENST00000419459 BCO2Q9BYV7 579 aa13.55□□□□□ -0.24
LINC00642-201ENST00000419459 VRTNQ9H8Y1 702 aa13.55□□□□□ -0.24
LINC00642-201ENST00000419459 MYO7AQ13402 2215 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms