RNA–Protein interactions for RNA: ENST00000419378.5

HMGN1-205, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 850 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-205ENST00000419378 DDX53Q86TM3 631 aaKnown RBP7.56□□□□□ -1.2
HMGN1-205ENST00000419378 FAM178BQ8IXR5 827 aa7.56□□□□□ -1.2
HMGN1-205ENST00000419378 TOP6BLQ8N6T0 577 aa7.56□□□□□ -1.2
HMGN1-205ENST00000419378 MRPL43Q8N983 215 aaKnown RBP7.56□□□□□ -1.2
HMGN1-205ENST00000419378 DNAJB8Q8NHS0 232 aa7.56□□□□□ -1.2
HMGN1-205ENST00000419378 AUTS2Q8WXX7 1259 aa7.56□□□□□ -1.2
HMGN1-205ENST00000419378 MSLNLQ96KJ4 702 aa7.56□□□□□ -1.2
HMGN1-205ENST00000419378 ZNF396Q96N95 335 aaPredicted RBP7.56□□□□□ -1.2
HMGN1-205ENST00000419378 DEPDC7Q96QD5 511 aa7.56□□□□□ -1.2
HMGN1-205ENST00000419378 CDCA3Q99618 268 aaPredicted RBP7.56□□□□□ -1.2
HMGN1-205ENST00000419378 ACO2Q99798 780 aaKnown RBP7.56□□□□□ -1.2
HMGN1-205ENST00000419378 FAM83CQ9BQN1 747 aa7.56□□□□□ -1.2
HMGN1-205ENST00000419378 CXCL16Q9H2A7 254 aa7.56□□□□□ -1.2
HMGN1-205ENST00000419378 PARVGQ9HBI0 331 aa7.56□□□□□ -1.2
HMGN1-205ENST00000419378 PTPRHQ9HD43 1115 aa7.56□□□□□ -1.2
HMGN1-205ENST00000419378 CLEC1BQ9P126 229 aa7.56□□□□□ -1.2
HMGN1-205ENST00000419378 LARSQ9P2J5 1176 aaKnown RBP7.56□□□□□ -1.2
HMGN1-205ENST00000419378 KCNG1Q9UIX4 513 aa7.56□□□□□ -1.2
HMGN1-205ENST00000419378 BARX2Q9UMQ3 279 aaPredicted RBP7.56□□□□□ -1.2
HMGN1-205ENST00000419378 FAN1Q9Y2M0 1017 aa7.56□□□□□ -1.2
HMGN1-205ENST00000419378 A0A087X0B3 334 aa7.55□□□□□ -1.2
HMGN1-205ENST00000419378 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP7.55□□□□□ -1.2
HMGN1-205ENST00000419378 FAM221BA6H8Z2 402 aa7.55□□□□□ -1.2
HMGN1-205ENST00000419378 CASTOR2A6NHX0 329 aa7.55□□□□□ -1.2
HMGN1-205ENST00000419378 PTGESO14684 152 aa7.55□□□□□ -1.2
HMGN1-205ENST00000419378 PPP6R2O75170 966 aa7.55□□□□□ -1.2
HMGN1-205ENST00000419378 CLEC3AO75596 197 aa7.55□□□□□ -1.2
HMGN1-205ENST00000419378 LEFTY1O75610 366 aa7.55□□□□□ -1.2
HMGN1-205ENST00000419378 CXCL14O95715 111 aa7.55□□□□□ -1.2
HMGN1-205ENST00000419378 EFEMP2O95967 443 aa7.55□□□□□ -1.2
HMGN1-205ENST00000419378 CTSAP10619 480 aa7.55□□□□□ -1.2
HMGN1-205ENST00000419378 MCF2P10911 925 aa7.55□□□□□ -1.2
HMGN1-205ENST00000419378 HARSP12081 509 aaKnown RBP7.55□□□□□ -1.2
HMGN1-205ENST00000419378 CA8P35219 290 aa7.55□□□□□ -1.2
HMGN1-205ENST00000419378 STAT6P42226 847 aa7.55□□□□□ -1.2
HMGN1-205ENST00000419378 OSTNP61366 133 aa7.55□□□□□ -1.2
HMGN1-205ENST00000419378 COASYQ13057 564 aa7.55□□□□□ -1.2
HMGN1-205ENST00000419378 SMAD4Q13485 552 aaKnown RBP7.55□□□□□ -1.2
HMGN1-205ENST00000419378 KCNC3Q14003 757 aa7.55□□□□□ -1.2
HMGN1-205ENST00000419378 GIT2Q14161 759 aa7.55□□□□□ -1.2
HMGN1-205ENST00000419378 PTPN14Q15678 1187 aa7.55□□□□□ -1.2
HMGN1-205ENST00000419378 NAB2Q15742 525 aa7.55□□□□□ -1.2
HMGN1-205ENST00000419378 PLA2G4EQ3MJ16 856 aa7.55□□□□□ -1.2
HMGN1-205ENST00000419378 GLRA4Q5JXX5 417 aa7.55□□□□□ -1.2
HMGN1-205ENST00000419378 RRAGBQ5VZM2 374 aa7.55□□□□□ -1.2
HMGN1-205ENST00000419378 MPZL3Q6UWV2 235 aa7.55□□□□□ -1.2
HMGN1-205ENST00000419378 ZPBP2Q6X784 338 aa7.55□□□□□ -1.2
HMGN1-205ENST00000419378 CCDC73Q6ZRK6 1079 aa7.55□□□□□ -1.2
HMGN1-205ENST00000419378 RNF168Q8IYW5 571 aaPredicted RBP7.55□□□□□ -1.2
HMGN1-205ENST00000419378 MYCT1Q8N699 235 aa7.55□□□□□ -1.2
HMGN1-205ENST00000419378 SMRP1Q8NCR6 262 aa7.55□□□□□ -1.2
HMGN1-205ENST00000419378 KCNN1Q92952 543 aa7.55□□□□□ -1.2
HMGN1-205ENST00000419378 DHRS1Q96LJ7 313 aa7.55□□□□□ -1.2
HMGN1-205ENST00000419378 FIZ1Q96SL8 496 aa7.55□□□□□ -1.2
HMGN1-205ENST00000419378 TCHPQ9BT92 498 aa7.55□□□□□ -1.2
HMGN1-205ENST00000419378 HERC2P3Q9BVR0 1158 aa7.55□□□□□ -1.2
HMGN1-205ENST00000419378 ZHX3Q9H4I2 956 aa7.55□□□□□ -1.2
HMGN1-205ENST00000419378 C7orf69Q9H7B7 122 aa7.55□□□□□ -1.2
HMGN1-205ENST00000419378 FAM86C1Q9NVL1 165 aa7.55□□□□□ -1.2
HMGN1-205ENST00000419378 ANKFY1Q9P2R3 1169 aa7.55□□□□□ -1.2
HMGN1-205ENST00000419378 STOML1Q9UBI4 398 aa7.55□□□□□ -1.2
HMGN1-205ENST00000419378 CACNG4Q9UBN1 327 aa7.55□□□□□ -1.2
HMGN1-205ENST00000419378 SUCOQ9UBS9 1254 aaKnown RBP7.55□□□□□ -1.2
HMGN1-205ENST00000419378 STK39Q9UEW8 545 aa7.55□□□□□ -1.2
HMGN1-205ENST00000419378 CD207Q9UJ71 328 aa7.55□□□□□ -1.2
HMGN1-205ENST00000419378 GDAQ9Y2T3 454 aa7.55□□□□□ -1.2
HMGN1-205ENST00000419378 RAXQ9Y2V3 346 aa7.55□□□□□ -1.2
HMGN1-205ENST00000419378 IRAK3Q9Y616 596 aa7.55□□□□□ -1.2
HMGN1-205ENST00000419378 H0YCG3 227 aa7.54□□□□□ -1.2
HMGN1-205ENST00000419378 MBTPS2O43462 519 aa7.54□□□□□ -1.2
HMGN1-205ENST00000419378 CLASP2O75122 1294 aaKnown RBP7.54□□□□□ -1.2
HMGN1-205ENST00000419378 TOM1L1O75674 476 aa7.54□□□□□ -1.2
HMGN1-205ENST00000419378 PIGRP01833 764 aa7.54□□□□□ -1.2
HMGN1-205ENST00000419378 SOD2P04179 222 aa7.54□□□□□ -1.2
HMGN1-205ENST00000419378 URODP06132 367 aa7.54□□□□□ -1.2
HMGN1-205ENST00000419378 THP07101 528 aa7.54□□□□□ -1.2
HMGN1-205ENST00000419378 SRGAP2BP0DMP2 458 aa7.54□□□□□ -1.2
HMGN1-205ENST00000419378 SCP2P22307 547 aa7.54□□□□□ -1.2
HMGN1-205ENST00000419378 NMT1P30419 496 aaKnown RBP7.54□□□□□ -1.2
HMGN1-205ENST00000419378 PMS1P54277 932 aaKnown RBP7.54□□□□□ -1.2
HMGN1-205ENST00000419378 SLC7A5Q01650 507 aa7.54□□□□□ -1.2
HMGN1-205ENST00000419378 HSP90AA2PQ14568 343 aaPredicted RBP7.54□□□□□ -1.2
HMGN1-205ENST00000419378 NOLC1Q14978 699 aaKnown RBP eCLIP7.54□□□□□ -1.2
HMGN1-205ENST00000419378 TDRD10Q5VZ19 366 aaKnown RBP7.54□□□□□ -1.2
HMGN1-205ENST00000419378 KIAA1211LQ6NV74 962 aa7.54□□□□□ -1.2
HMGN1-205ENST00000419378 SHC4Q6S5L8 630 aa7.54□□□□□ -1.2
HMGN1-205ENST00000419378 TMEM184AQ6ZMB5 413 aa7.54□□□□□ -1.2
HMGN1-205ENST00000419378 TAS1R1Q7RTX1 841 aa7.54□□□□□ -1.2
HMGN1-205ENST00000419378 HAUS6Q7Z4H7 955 aa7.54□□□□□ -1.2
HMGN1-205ENST00000419378 NOP9Q86U38 636 aaKnown RBP7.54□□□□□ -1.2
HMGN1-205ENST00000419378 PPFIBP1Q86W92 1011 aa7.54□□□□□ -1.2
HMGN1-205ENST00000419378 PDILTQ8N807 584 aa7.54□□□□□ -1.2
HMGN1-205ENST00000419378 KCNG4Q8TDN1 519 aa7.54□□□□□ -1.2
HMGN1-205ENST00000419378 KLHL6Q8WZ60 621 aa7.54□□□□□ -1.2
HMGN1-205ENST00000419378 RABGGTAQ92696 567 aa7.54□□□□□ -1.2
HMGN1-205ENST00000419378 CASP10Q92851 521 aa7.54□□□□□ -1.2
HMGN1-205ENST00000419378 BICD1Q96G01 975 aa7.54□□□□□ -1.2
HMGN1-205ENST00000419378 MRFAP1L1Q96HT8 127 aa7.54□□□□□ -1.2
HMGN1-205ENST00000419378 ZBTB45Q96K62 511 aaPredicted RBP7.54□□□□□ -1.2
HMGN1-205ENST00000419378 SNX27Q96L92 541 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms