RNA–Protein interactions for RNA: ENST00000416721.6

RBFOX2-208, Transcript of RNA binding fox-1 homolog 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RBFOX2, Length 1,254 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX2-208ENST00000416721 FUBP3Q96I24 572 aaKnown RBP eCLIP11.7□□□□□ -0.54
RBFOX2-208ENST00000416721 MYRFLQ96LU7 910 aa11.7□□□□□ -0.54
RBFOX2-208ENST00000416721 NACA2Q9H009 215 aa11.7□□□□□ -0.54
RBFOX2-208ENST00000416721 TNMDQ9H2S6 317 aa11.7□□□□□ -0.54
RBFOX2-208ENST00000416721 CRTAC1Q9NQ79 661 aa11.7□□□□□ -0.54
RBFOX2-208ENST00000416721 RXFP3Q9NSD7 469 aa11.7□□□□□ -0.54
RBFOX2-208ENST00000416721 EHD2Q9NZN4 543 aa11.7□□□□□ -0.54
RBFOX2-208ENST00000416721 BCCIPQ9P287 314 aaKnown RBP eCLIP11.7□□□□□ -0.54
RBFOX2-208ENST00000416721 FRMD3A2A2Y4 597 aa11.69□□□□□ -0.54
RBFOX2-208ENST00000416721 SOBPA7XYQ1 873 aa11.69□□□□□ -0.54
RBFOX2-208ENST00000416721 LEFTY2O00292 366 aa11.69□□□□□ -0.54
RBFOX2-208ENST00000416721 CLDN5O00501 218 aa11.69□□□□□ -0.54
RBFOX2-208ENST00000416721 GABRDO14764 452 aa11.69□□□□□ -0.54
RBFOX2-208ENST00000416721 TRIM66O15016 1216 aa11.69□□□□□ -0.54
RBFOX2-208ENST00000416721 POLR2DO15514 142 aaKnown RBP11.69□□□□□ -0.54
RBFOX2-208ENST00000416721 EXOC3O60645 756 aa11.69□□□□□ -0.54
RBFOX2-208ENST00000416721 CAVIN2O95810 425 aa11.69□□□□□ -0.54
RBFOX2-208ENST00000416721 CST3P01034 146 aaPredicted RBP11.69□□□□□ -0.54
RBFOX2-208ENST00000416721 ADRB1P08588 477 aa11.69□□□□□ -0.54
RBFOX2-208ENST00000416721 ZNF806P0C7X5 589 aa11.69□□□□□ -0.54
RBFOX2-208ENST00000416721 MBL2P11226 248 aaPredicted RBP11.69□□□□□ -0.54
RBFOX2-208ENST00000416721 PTPN1P18031 435 aaKnown RBP11.69□□□□□ -0.54
RBFOX2-208ENST00000416721 CASP1P29466 404 aa11.69□□□□□ -0.54
RBFOX2-208ENST00000416721 MAGEA11P43364 429 aa11.69□□□□□ -0.54
RBFOX2-208ENST00000416721 ME1P48163 572 aa11.69□□□□□ -0.54
RBFOX2-208ENST00000416721 USP39Q53GS9 565 aaKnown RBP11.69□□□□□ -0.54
RBFOX2-208ENST00000416721 FAM26FQ5R3K3 315 aa11.69□□□□□ -0.54
RBFOX2-208ENST00000416721 STPG1Q5TH74 334 aa11.69□□□□□ -0.54
RBFOX2-208ENST00000416721 RNF43Q68DV7 783 aa11.69□□□□□ -0.54
RBFOX2-208ENST00000416721 FAM171BQ6P995 826 aa11.69□□□□□ -0.54
RBFOX2-208ENST00000416721 VSTM1Q6UX27 236 aa11.69□□□□□ -0.54
RBFOX2-208ENST00000416721 SYT13Q7L8C5 426 aa11.69□□□□□ -0.54
RBFOX2-208ENST00000416721 FILIP1Q7Z7B0 1213 aa11.69□□□□□ -0.54
RBFOX2-208ENST00000416721 SPRYD3Q8NCJ5 442 aa11.69□□□□□ -0.54
RBFOX2-208ENST00000416721 MYCBPAPQ8TBZ2 947 aa11.69□□□□□ -0.54
RBFOX2-208ENST00000416721 DDX1Q92499 740 aaKnown RBP11.69□□□□□ -0.54
RBFOX2-208ENST00000416721 ELMO3Q96BJ8 720 aa11.69□□□□□ -0.54
RBFOX2-208ENST00000416721 LOXL4Q96JB6 756 aa11.69□□□□□ -0.54
RBFOX2-208ENST00000416721 SLITRK1Q96PX8 696 aa11.69□□□□□ -0.54
RBFOX2-208ENST00000416721 PKMYT1Q99640 499 aa11.69□□□□□ -0.54
RBFOX2-208ENST00000416721 TRIM9Q9C026 710 aa11.69□□□□□ -0.54
RBFOX2-208ENST00000416721 SLC39A2Q9NP94 309 aa11.69□□□□□ -0.54
RBFOX2-208ENST00000416721 CFAP97Q9P2B7 532 aa11.69□□□□□ -0.54
RBFOX2-208ENST00000416721 CHORDC1Q9UHD1 332 aaPredicted RBP11.69□□□□□ -0.54
RBFOX2-208ENST00000416721 CPQQ9Y646 472 aa11.69□□□□□ -0.54
RBFOX2-208ENST00000416721 PATJQ8NI35 1801 aa11.69□□□□□ -0.54
RBFOX2-208ENST00000416721 K7ELQ4 463 aaPredicted RBP11.68□□□□□ -0.54
RBFOX2-208ENST00000416721 EPN2O95208 641 aa11.68□□□□□ -0.54
RBFOX2-208ENST00000416721 IRF1P10914 325 aa11.68□□□□□ -0.54
RBFOX2-208ENST00000416721 WARSP23381 471 aaKnown RBP11.68□□□□□ -0.54
RBFOX2-208ENST00000416721 TIE1P35590 1138 aa11.68□□□□□ -0.54
RBFOX2-208ENST00000416721 DHPSP49366 369 aaPredicted RBP11.68□□□□□ -0.54
RBFOX2-208ENST00000416721 TAF10Q12962 218 aa11.68□□□□□ -0.54
RBFOX2-208ENST00000416721 PLK5Q496M5 336 aa11.68□□□□□ -0.54
RBFOX2-208ENST00000416721 SCARA5Q6ZMJ2 495 aa11.68□□□□□ -0.54
RBFOX2-208ENST00000416721 NAT16Q8N8M0 369 aa11.68□□□□□ -0.54
RBFOX2-208ENST00000416721 XXYLT1Q8NBI6 393 aa11.68□□□□□ -0.54
RBFOX2-208ENST00000416721 LINC00301Q8NCQ3 95 aa11.68□□□□□ -0.54
RBFOX2-208ENST00000416721 CCDC26Q8TAB7 109 aa11.68□□□□□ -0.54
RBFOX2-208ENST00000416721 CXorf38Q8TB03 319 aa11.68□□□□□ -0.54
RBFOX2-208ENST00000416721 SPATA18Q8TC71 538 aa11.68□□□□□ -0.54
RBFOX2-208ENST00000416721 ERLEC1Q96DZ1 483 aa11.68□□□□□ -0.54
RBFOX2-208ENST00000416721 SPATA17Q96L03 361 aa11.68□□□□□ -0.54
RBFOX2-208ENST00000416721 ZNF518BQ9C0D4 1074 aa11.68□□□□□ -0.54
RBFOX2-208ENST00000416721 RNF38Q9H0F5 515 aa11.68□□□□□ -0.54
RBFOX2-208ENST00000416721 DPEP3Q9H4B8 488 aa11.68□□□□□ -0.54
RBFOX2-208ENST00000416721 ZDHHC4Q9NPG8 344 aa11.68□□□□□ -0.54
RBFOX2-208ENST00000416721 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.68□□□□□ -0.54
RBFOX2-208ENST00000416721 VPS45Q9NRW7 570 aa11.68□□□□□ -0.54
RBFOX2-208ENST00000416721 AGPAT3Q9NRZ7 376 aa11.68□□□□□ -0.54
RBFOX2-208ENST00000416721 FAM13BQ9NYF5 915 aa11.68□□□□□ -0.54
RBFOX2-208ENST00000416721 GCNT4Q9P109 453 aa11.68□□□□□ -0.54
RBFOX2-208ENST00000416721 ARHGAP26Q9UNA1 814 aa11.68□□□□□ -0.54
RBFOX2-208ENST00000416721 MYH11P35749 1972 aa11.67□□□□□ -0.54
RBFOX2-208ENST00000416721 CCDC163A0A0D9SF12 145 aa11.67□□□□□ -0.54
RBFOX2-208ENST00000416721 ZNF840PA6NDX5 716 aa11.67□□□□□ -0.54
RBFOX2-208ENST00000416721 C4orf47A7E2U8 309 aa11.67□□□□□ -0.54
RBFOX2-208ENST00000416721 SLC9A3R1O14745 358 aaPredicted RBP11.67□□□□□ -0.54
RBFOX2-208ENST00000416721 CUTAO60888 179 aa11.67□□□□□ -0.54
RBFOX2-208ENST00000416721 ALDH1A2O94788 518 aa11.67□□□□□ -0.54
RBFOX2-208ENST00000416721 YWHAQP27348 245 aa11.67□□□□□ -0.54
RBFOX2-208ENST00000416721 HOXD13P35453 343 aa11.67□□□□□ -0.54
RBFOX2-208ENST00000416721 RAP1GAPP47736 663 aa11.67□□□□□ -0.54
RBFOX2-208ENST00000416721 SLC6A11P48066 632 aa11.67□□□□□ -0.54
RBFOX2-208ENST00000416721 NASPP49321 788 aaPredicted RBP11.67□□□□□ -0.54
RBFOX2-208ENST00000416721 CASP4P49662 377 aa11.67□□□□□ -0.54
RBFOX2-208ENST00000416721 CDH8P55286 799 aa11.67□□□□□ -0.54
RBFOX2-208ENST00000416721 MYL6P60660 151 aa11.67□□□□□ -0.54
RBFOX2-208ENST00000416721 KDSRQ06136 332 aa11.67□□□□□ -0.54
RBFOX2-208ENST00000416721 CYP24A1Q07973 514 aa11.67□□□□□ -0.54
RBFOX2-208ENST00000416721 USP4Q13107 963 aa11.67□□□□□ -0.54
RBFOX2-208ENST00000416721 ST3GAL2Q16842 350 aa11.67□□□□□ -0.54
RBFOX2-208ENST00000416721 UAP1L1Q3KQV9 507 aa11.67□□□□□ -0.54
RBFOX2-208ENST00000416721 N4BP2L1Q5TBK1 243 aaPredicted RBP11.67□□□□□ -0.54
RBFOX2-208ENST00000416721 ARMCX6Q7L4S7 300 aa11.67□□□□□ -0.54
RBFOX2-208ENST00000416721 CEP57L1Q8IYX8 460 aa11.67□□□□□ -0.54
RBFOX2-208ENST00000416721 ALLCQ8N6M5 410 aa11.67□□□□□ -0.54
RBFOX2-208ENST00000416721 ZNF507Q8TCN5 953 aa11.67□□□□□ -0.54
RBFOX2-208ENST00000416721 EZH1Q92800 747 aaPredicted RBP11.67□□□□□ -0.54
RBFOX2-208ENST00000416721 FBXO32Q969P5 355 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms