RNA–Protein interactions for RNA: ENST00000416649.6

NCKIPSD-204, Transcript of NCK interacting protein with SH3 domain, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NCKIPSD, Length 2,925 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-204ENST00000416649 PFDN4Q9NQP4 134 aa15.37■□□□□ 0.05
NCKIPSD-204ENST00000416649 ZNF70Q9UC06 446 aaPredicted RBP15.37■□□□□ 0.05
NCKIPSD-204ENST00000416649 ZBTB21Q9ULJ3 1066 aa15.37■□□□□ 0.05
NCKIPSD-204ENST00000416649 PLA2G4CQ9UP65 541 aa15.37■□□□□ 0.05
NCKIPSD-204ENST00000416649 IKBKGQ9Y6K9 419 aa15.37■□□□□ 0.05
NCKIPSD-204ENST00000416649 SMCHD1A6NHR9 2005 aa15.36■□□□□ 0.05
NCKIPSD-204ENST00000416649 C6orf222P0C671 652 aaPredicted RBP15.36■□□□□ 0.05
NCKIPSD-204ENST00000416649 GAP43P17677 238 aa15.36■□□□□ 0.05
NCKIPSD-204ENST00000416649 PPIDQ08752 370 aaKnown RBP15.36■□□□□ 0.05
NCKIPSD-204ENST00000416649 ALCAMQ13740 583 aa15.36■□□□□ 0.05
NCKIPSD-204ENST00000416649 HNRNPDQ14103 355 aaKnown RBP15.36■□□□□ 0.05
NCKIPSD-204ENST00000416649 HIF1AQ16665 826 aa15.36■□□□□ 0.05
NCKIPSD-204ENST00000416649 BBS9Q3SYG4 887 aa15.36■□□□□ 0.05
NCKIPSD-204ENST00000416649 TCHHL1Q5QJ38 904 aaPredicted RBP15.36■□□□□ 0.05
NCKIPSD-204ENST00000416649 PALM2Q8IXS6 379 aa15.36■□□□□ 0.05
NCKIPSD-204ENST00000416649 METTL25Q8N6Q8 603 aa15.36■□□□□ 0.05
NCKIPSD-204ENST00000416649 PRPF18Q99633 342 aaKnown RBP15.36■□□□□ 0.05
NCKIPSD-204ENST00000416649 PIM2Q9P1W9 311 aa15.36■□□□□ 0.05
NCKIPSD-204ENST00000416649 NDC80O14777 642 aa15.36■□□□□ 0.05
NCKIPSD-204ENST00000416649 ADCY3O60266 1144 aa15.36■□□□□ 0.05
NCKIPSD-204ENST00000416649 NDUFB10O96000 172 aa15.36■□□□□ 0.05
NCKIPSD-204ENST00000416649 RAG1P15918 1043 aa15.36■□□□□ 0.05
NCKIPSD-204ENST00000416649 RFX1P22670 979 aa15.36■□□□□ 0.05
NCKIPSD-204ENST00000416649 GLRA2P23416 452 aa15.36■□□□□ 0.05
NCKIPSD-204ENST00000416649 MXI1P50539 228 aa15.36■□□□□ 0.05
NCKIPSD-204ENST00000416649 TAS2R40P59535 323 aa15.36■□□□□ 0.05
NCKIPSD-204ENST00000416649 TCEAL1Q15170 157 aa15.36■□□□□ 0.05
NCKIPSD-204ENST00000416649 MYLK3Q32MK0 819 aa15.36■□□□□ 0.05
NCKIPSD-204ENST00000416649 SYCP2LQ5T4T6 812 aa15.36■□□□□ 0.05
NCKIPSD-204ENST00000416649 KLHL35Q6PF15 583 aa15.36■□□□□ 0.05
NCKIPSD-204ENST00000416649 UGT2A3Q6UWM9 527 aa15.36■□□□□ 0.05
NCKIPSD-204ENST00000416649 RTKN2Q8IZC4 609 aa15.36■□□□□ 0.05
NCKIPSD-204ENST00000416649 ACSF2Q96CM8 615 aaPredicted RBP15.36■□□□□ 0.05
NCKIPSD-204ENST00000416649 POLR3CQ9BUI4 534 aaPredicted RBP15.36■□□□□ 0.05
NCKIPSD-204ENST00000416649 IDI2Q9BXS1 227 aa15.36■□□□□ 0.05
NCKIPSD-204ENST00000416649 RABGEF1Q9UJ41 708 aa15.36■□□□□ 0.05
NCKIPSD-204ENST00000416649 COL4A5P29400 1685 aa15.36■□□□□ 0.05
NCKIPSD-204ENST00000416649 RBM47A0AV96 593 aaKnown RBP15.35■□□□□ 0.05
NCKIPSD-204ENST00000416649 EIF3DO15371 548 aaKnown RBP eCLIP15.35■□□□□ 0.05
NCKIPSD-204ENST00000416649 VIL1P09327 827 aaKnown RBP15.35■□□□□ 0.05
NCKIPSD-204ENST00000416649 SMIM18P0DKX4 95 aa15.35■□□□□ 0.05
NCKIPSD-204ENST00000416649 CCR3P51677 355 aa15.35■□□□□ 0.05
NCKIPSD-204ENST00000416649 NCKAP1LP55160 1127 aa15.35■□□□□ 0.05
NCKIPSD-204ENST00000416649 GRM2Q14416 872 aa15.35■□□□□ 0.05
NCKIPSD-204ENST00000416649 HSP90AA5PQ58FG0 334 aa15.35■□□□□ 0.05
NCKIPSD-204ENST00000416649 SYDE2Q5VT97 1194 aa15.35■□□□□ 0.05
NCKIPSD-204ENST00000416649 ZNF720Q7Z2F6 126 aa15.35■□□□□ 0.05
NCKIPSD-204ENST00000416649 SAMD7Q7Z3H4 446 aa15.35■□□□□ 0.05
NCKIPSD-204ENST00000416649 ARL10Q8N8L6 244 aa15.35■□□□□ 0.05
NCKIPSD-204ENST00000416649 TMEM121Q9BTD3 319 aa15.35■□□□□ 0.05
NCKIPSD-204ENST00000416649 LIN28AQ9H9Z2 209 aaKnown RBP15.35■□□□□ 0.05
NCKIPSD-204ENST00000416649 GPAMQ9HCL2 828 aa15.35■□□□□ 0.05
NCKIPSD-204ENST00000416649 ZNF180Q9UJW8 692 aa15.35■□□□□ 0.05
NCKIPSD-204ENST00000416649 ZBTB5O15062 677 aa15.35■□□□□ 0.05
NCKIPSD-204ENST00000416649 ADSSP30520 456 aa15.35■□□□□ 0.05
NCKIPSD-204ENST00000416649 PHBP35232 272 aa15.35■□□□□ 0.05
NCKIPSD-204ENST00000416649 KCTD21Q4G0X4 260 aa15.35■□□□□ 0.05
NCKIPSD-204ENST00000416649 EFHC2Q5JST6 749 aa15.35■□□□□ 0.05
NCKIPSD-204ENST00000416649 ACAD10Q6JQN1 1059 aa15.35■□□□□ 0.05
NCKIPSD-204ENST00000416649 FAM71AQ8IYT1 594 aa15.35■□□□□ 0.05
NCKIPSD-204ENST00000416649 PACSIN3Q9UKS6 424 aa15.35■□□□□ 0.05
NCKIPSD-204ENST00000416649 FAM86B1E9PN63 330 aa15.34■□□□□ 0.05
NCKIPSD-204ENST00000416649 ALOX15BO15296 676 aa15.34■□□□□ 0.05
NCKIPSD-204ENST00000416649 FAM86B2P0C5J1 330 aa15.34■□□□□ 0.05
NCKIPSD-204ENST00000416649 VARSP26640 1264 aaKnown RBP15.34■□□□□ 0.05
NCKIPSD-204ENST00000416649 KLF1Q13351 362 aaPredicted RBP15.34■□□□□ 0.05
NCKIPSD-204ENST00000416649 TLR1Q15399 786 aa15.34■□□□□ 0.05
NCKIPSD-204ENST00000416649 MAP3K21Q5TCX8 1036 aa15.34■□□□□ 0.05
NCKIPSD-204ENST00000416649 SERAC1Q96JX3 654 aa15.34■□□□□ 0.05
NCKIPSD-204ENST00000416649 CBWD1Q9BRT8 395 aa15.34■□□□□ 0.05
NCKIPSD-204ENST00000416649 DNAJB4Q9UDY4 337 aa15.34■□□□□ 0.05
NCKIPSD-204ENST00000416649 TUBGCP4Q9UGJ1 667 aa15.34■□□□□ 0.05
NCKIPSD-204ENST00000416649 INPP5FQ9Y2H2 1132 aa15.34■□□□□ 0.05
NCKIPSD-204ENST00000416649 DTNAQ9Y4J8 743 aa15.34■□□□□ 0.05
NCKIPSD-204ENST00000416649 CLUHO75153 1309 aa15.34■□□□□ 0.05
NCKIPSD-204ENST00000416649 A0A088AWK7 358 aa15.34■□□□□ 0.05
NCKIPSD-204ENST00000416649 CAPN14A8MX76 684 aa15.34■□□□□ 0.05
NCKIPSD-204ENST00000416649 MLH1P40692 756 aa15.34■□□□□ 0.05
NCKIPSD-204ENST00000416649 SULT2A1Q06520 285 aa15.34■□□□□ 0.05
NCKIPSD-204ENST00000416649 TBL3Q12788 808 aaKnown RBP15.34■□□□□ 0.05
NCKIPSD-204ENST00000416649 GK3PQ14409 553 aa15.34■□□□□ 0.05
NCKIPSD-204ENST00000416649 NCCRP1Q6ZVX7 275 aaPredicted RBP15.34■□□□□ 0.05
NCKIPSD-204ENST00000416649 STXBP4Q6ZWJ1 553 aa15.34■□□□□ 0.05
NCKIPSD-204ENST00000416649 C10orf71Q711Q0 1435 aa15.34■□□□□ 0.05
NCKIPSD-204ENST00000416649 TMC7Q7Z402 723 aa15.34■□□□□ 0.05
NCKIPSD-204ENST00000416649 CCDC17Q96LX7 622 aa15.34■□□□□ 0.05
NCKIPSD-204ENST00000416649 FOXP3Q9BZS1 431 aa15.34■□□□□ 0.05
NCKIPSD-204ENST00000416649 BARX2Q9UMQ3 279 aaPredicted RBP15.34■□□□□ 0.05
NCKIPSD-204ENST00000416649 SOX13Q9UN79 622 aa15.34■□□□□ 0.05
NCKIPSD-204ENST00000416649 DENND3A2RUS2 1198 aa15.33■□□□□ 0.05
NCKIPSD-204ENST00000416649 TTLL13PA6NNM8 815 aa15.33■□□□□ 0.05
NCKIPSD-204ENST00000416649 H3BSA7 217 aa15.33■□□□□ 0.05
NCKIPSD-204ENST00000416649 K7ENM7 598 aa15.33■□□□□ 0.05
NCKIPSD-204ENST00000416649 SNHG28P0DPA3 235 aa15.33■□□□□ 0.05
NCKIPSD-204ENST00000416649 EMP3P54852 163 aa15.33■□□□□ 0.05
NCKIPSD-204ENST00000416649 IRX4P78413 519 aa15.33■□□□□ 0.05
NCKIPSD-204ENST00000416649 BST1Q10588 318 aa15.33■□□□□ 0.05
NCKIPSD-204ENST00000416649 PTK7Q13308 1070 aa15.33■□□□□ 0.05
NCKIPSD-204ENST00000416649 MSS51Q4VC12 460 aa15.33■□□□□ 0.05
NCKIPSD-204ENST00000416649 DALRD3Q5D0E6 543 aaKnown RBP15.33■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms