RNA–Protein interactions for RNA: ENST00000415997.1

APP-207, Transcript of amyloid beta precursor protein, humanhuman

TSL 3

Gene APP, Length 541 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-207ENST00000415997 CCNI2Q6ZMN8 369 aaPredicted RBP3.54□□□□□ -1.84
APP-207ENST00000415997 GPR155Q7Z3F1 870 aa3.54□□□□□ -1.84
APP-207ENST00000415997 CCDC103Q8IW40 242 aa3.54□□□□□ -1.84
APP-207ENST00000415997 C19orf47Q8N9M1 422 aaKnown RBP3.54□□□□□ -1.84
APP-207ENST00000415997 COLGALT1Q8NBJ5 622 aa3.54□□□□□ -1.84
APP-207ENST00000415997 NUDT10Q8NFP7 164 aa3.54□□□□□ -1.84
APP-207ENST00000415997 CMASQ8NFW8 434 aaPredicted RBP3.54□□□□□ -1.84
APP-207ENST00000415997 OR6P1Q8NGX9 317 aa3.54□□□□□ -1.84
APP-207ENST00000415997 MDM1Q8TC05 714 aa3.54□□□□□ -1.84
APP-207ENST00000415997 BTN2A2Q8WVV5 523 aa3.54□□□□□ -1.84
APP-207ENST00000415997 TCEAL3Q969E4 200 aa3.54□□□□□ -1.84
APP-207ENST00000415997 NUDT11Q96G61 164 aa3.54□□□□□ -1.84
APP-207ENST00000415997 TMEM209Q96SK2 561 aa3.54□□□□□ -1.84
APP-207ENST00000415997 NELL2Q99435 816 aa3.54□□□□□ -1.84
APP-207ENST00000415997 NOL10Q9BSC4 688 aaKnown RBP3.54□□□□□ -1.84
APP-207ENST00000415997 KATNAL1Q9BW62 490 aa3.54□□□□□ -1.84
APP-207ENST00000415997 CWH43Q9H720 699 aa3.54□□□□□ -1.84
APP-207ENST00000415997 SFXN1Q9H9B4 322 aa3.54□□□□□ -1.84
APP-207ENST00000415997 WDR6Q9NNW5 1121 aaKnown RBP3.54□□□□□ -1.84
APP-207ENST00000415997 VPS45Q9NRW7 570 aa3.54□□□□□ -1.84
APP-207ENST00000415997 RNF146Q9NTX7 359 aa3.54□□□□□ -1.84
APP-207ENST00000415997 X6R8D5 127 aa3.54□□□□□ -1.84
APP-207ENST00000415997 F8P00451 2351 aa3.54□□□□□ -1.84
APP-207ENST00000415997 C2orf16Q68DN1 1984 aa3.54□□□□□ -1.84
APP-207ENST00000415997 GREB1LQ9C091 1923 aaPredicted RBP3.54□□□□□ -1.84
APP-207ENST00000415997 AHCTF1Q8WYP5 2266 aa3.54□□□□□ -1.84
APP-207ENST00000415997 SHROOM3Q8TF72 1996 aa3.53□□□□□ -1.84
APP-207ENST00000415997 BSNQ9UPA5 3926 aa3.53□□□□□ -1.84
APP-207ENST00000415997 ARNTLO00327 626 aa3.53□□□□□ -1.84
APP-207ENST00000415997 MPHOSPH10O00566 681 aaKnown RBP3.53□□□□□ -1.84
APP-207ENST00000415997 TBX1O43435 398 aa3.53□□□□□ -1.84
APP-207ENST00000415997 FOXS1O43638 330 aa3.53□□□□□ -1.84
APP-207ENST00000415997 FBXO21O94952 628 aa3.53□□□□□ -1.84
APP-207ENST00000415997 NDUFB10O96000 172 aa3.53□□□□□ -1.84
APP-207ENST00000415997 ZNF286BP0CG31 522 aa3.53□□□□□ -1.84
APP-207ENST00000415997 TXNP10599 105 aaKnown RBP3.53□□□□□ -1.84
APP-207ENST00000415997 NAT2P11245 290 aa3.53□□□□□ -1.84
APP-207ENST00000415997 LAMP2P13473 410 aa3.53□□□□□ -1.84
APP-207ENST00000415997 LCP1P13796 627 aa3.53□□□□□ -1.84
APP-207ENST00000415997 CASTP20810 708 aaKnown RBP3.53□□□□□ -1.84
APP-207ENST00000415997 CD72P21854 359 aa3.53□□□□□ -1.84
APP-207ENST00000415997 IL15P40933 162 aaPredicted RBP3.53□□□□□ -1.84
APP-207ENST00000415997 GLRBP48167 497 aa3.53□□□□□ -1.84
APP-207ENST00000415997 NASPP49321 788 aaPredicted RBP3.53□□□□□ -1.84
APP-207ENST00000415997 GATMP50440 423 aa3.53□□□□□ -1.84
APP-207ENST00000415997 CCR3P51677 355 aa3.53□□□□□ -1.84
APP-207ENST00000415997 FOXE3Q13461 319 aa3.53□□□□□ -1.84
APP-207ENST00000415997 MVPQ14764 893 aaKnown RBP3.53□□□□□ -1.84
APP-207ENST00000415997 UBXN2BQ14CS0 331 aa3.53□□□□□ -1.84
APP-207ENST00000415997 PRKD1Q15139 912 aaPredicted RBP3.53□□□□□ -1.84
APP-207ENST00000415997 SF1Q15637 639 aaKnown RBP3.53□□□□□ -1.84
APP-207ENST00000415997 DGKDQ16760 1214 aa3.53□□□□□ -1.84
APP-207ENST00000415997 PRSS53Q2L4Q9 553 aa3.53□□□□□ -1.84
APP-207ENST00000415997 TWISTNBQ3B726 338 aaPredicted RBP3.53□□□□□ -1.84
APP-207ENST00000415997 TKFCQ3LXA3 575 aa3.53□□□□□ -1.84
APP-207ENST00000415997 SV2CQ496J9 727 aa3.53□□□□□ -1.84
APP-207ENST00000415997 PAN2Q504Q3 1202 aaKnown RBP3.53□□□□□ -1.84
APP-207ENST00000415997 SLC44A4Q53GD3 710 aa3.53□□□□□ -1.84
APP-207ENST00000415997 USP39Q53GS9 565 aaKnown RBP3.53□□□□□ -1.84
APP-207ENST00000415997 MUM1L1Q5H9M0 696 aa3.53□□□□□ -1.84
APP-207ENST00000415997 DAB2IPQ5VWQ8 1189 aa3.53□□□□□ -1.84
APP-207ENST00000415997 TCTN3Q6NUS6 607 aa3.53□□□□□ -1.84
APP-207ENST00000415997 PKN3Q6P5Z2 889 aa3.53□□□□□ -1.84
APP-207ENST00000415997 RALYLQ86SE5 291 aaKnown RBP3.53□□□□□ -1.84
APP-207ENST00000415997 PIP4P1Q86T03 277 aa3.53□□□□□ -1.84
APP-207ENST00000415997 LONP2Q86WA8 852 aa3.53□□□□□ -1.84
APP-207ENST00000415997 CERS3Q8IU89 383 aa3.53□□□□□ -1.84
APP-207ENST00000415997 TRIM59Q8IWR1 403 aa3.53□□□□□ -1.84
APP-207ENST00000415997 RBM12BQ8IXT5 1001 aaKnown RBP3.53□□□□□ -1.84
APP-207ENST00000415997 THNSL1Q8IYQ7 743 aa3.53□□□□□ -1.84
APP-207ENST00000415997 ZNF654Q8IZM8 581 aa3.53□□□□□ -1.84
APP-207ENST00000415997 RCBTB1Q8NDN9 531 aa3.53□□□□□ -1.84
APP-207ENST00000415997 PPTC7Q8NI37 304 aa3.53□□□□□ -1.84
APP-207ENST00000415997 WBP1Q96G27 269 aa3.53□□□□□ -1.84
APP-207ENST00000415997 LMF1Q96S06 567 aa3.53□□□□□ -1.84
APP-207ENST00000415997 C16orf70Q9BSU1 422 aa3.53□□□□□ -1.84
APP-207ENST00000415997 ALG1Q9BT22 464 aa3.53□□□□□ -1.84
APP-207ENST00000415997 RPP25Q9BUL9 199 aaKnown RBP3.53□□□□□ -1.84
APP-207ENST00000415997 EDEM2Q9BV94 578 aa3.53□□□□□ -1.84
APP-207ENST00000415997 SMOC1Q9H4F8 434 aa3.53□□□□□ -1.84
APP-207ENST00000415997 KANSL2Q9H9L4 492 aa3.53□□□□□ -1.84
APP-207ENST00000415997 ENTPD7Q9NQZ7 604 aa3.53□□□□□ -1.84
APP-207ENST00000415997 HOMER2Q9NSB8 354 aa3.53□□□□□ -1.84
APP-207ENST00000415997 HSPBP1Q9NZL4 362 aa3.53□□□□□ -1.84
APP-207ENST00000415997 NUMBLQ9Y6R0 609 aa3.53□□□□□ -1.84
APP-207ENST00000415997 ASCC3Q8N3C0 2202 aaKnown RBP3.53□□□□□ -1.84
APP-207ENST00000415997 NIPBLQ6KC79 2804 aaeCLIP3.53□□□□□ -1.84
APP-207ENST00000415997 TSC2P49815 1807 aa3.53□□□□□ -1.84
APP-207ENST00000415997 PLXNB3Q9ULL4 1909 aa3.52□□□□□ -1.85
APP-207ENST00000415997 CLUHO75153 1309 aa3.52□□□□□ -1.85
APP-207ENST00000415997 LAMA4Q16363 1823 aa3.52□□□□□ -1.85
APP-207ENST00000415997 SPAARA0A1B0GVQ0 90 aa3.52□□□□□ -1.85
APP-207ENST00000415997 CLEC18AA5D8T8 446 aa3.52□□□□□ -1.85
APP-207ENST00000415997 CAPN9O14815 690 aa3.52□□□□□ -1.85
APP-207ENST00000415997 GHRP10912 638 aa3.52□□□□□ -1.85
APP-207ENST00000415997 ZNF16P17020 682 aaPredicted RBP3.52□□□□□ -1.85
APP-207ENST00000415997 MPLP40238 635 aa3.52□□□□□ -1.85
APP-207ENST00000415997 SOX9P48436 509 aa3.52□□□□□ -1.85
APP-207ENST00000415997 FNTBP49356 437 aa3.52□□□□□ -1.85
APP-207ENST00000415997 DGCR2P98153 550 aa3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms