RNA–Protein interactions for RNA: ENST00000414963.2

SF3B1-204, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SF3B1, Length 651 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-204ENST00000414963 DMAP1Q9NPF5 467 aaPredicted RBP15.05■□□□□ -0
SF3B1-204ENST00000414963 TLR9Q9NR96 1032 aa15.05■□□□□ -0
SF3B1-204ENST00000414963 STRIP2Q9ULQ0 834 aa15.05■□□□□ -0
SF3B1-204ENST00000414963 PDE4DIPQ5VU43 2346 aa15.04■□□□□ -0
SF3B1-204ENST00000414963 WDR27A2RRH5 827 aa15.04■□□□□ -0
SF3B1-204ENST00000414963 C2orf71A6NGG8 1288 aa15.04■□□□□ -0
SF3B1-204ENST00000414963 HHLA1C9JL84 531 aa15.04■□□□□ -0
SF3B1-204ENST00000414963 TULP2O00295 520 aa15.04■□□□□ -0
SF3B1-204ENST00000414963 GRM6O15303 877 aa15.04■□□□□ -0
SF3B1-204ENST00000414963 TEX28O15482 410 aa15.04■□□□□ -0
SF3B1-204ENST00000414963 GABBR2O75899 941 aa15.04■□□□□ -0
SF3B1-204ENST00000414963 BEST1O76090 585 aa15.04■□□□□ -0
SF3B1-204ENST00000414963 CNPP09543 421 aaKnown RBP15.04■□□□□ -0
SF3B1-204ENST00000414963 ATF2P15336 505 aa15.04■□□□□ -0
SF3B1-204ENST00000414963 RPL17P18621 184 aaKnown RBP15.04■□□□□ -0
SF3B1-204ENST00000414963 CYP2F1P24903 491 aa15.04■□□□□ -0
SF3B1-204ENST00000414963 CACNA2D1P54289 1103 aa15.04■□□□□ -0
SF3B1-204ENST00000414963 ARPP19P56211 112 aa15.04■□□□□ -0
SF3B1-204ENST00000414963 MAP3K7CLP57077 242 aa15.04■□□□□ -0
SF3B1-204ENST00000414963 GPM6BQ13491 265 aa15.04■□□□□ -0
SF3B1-204ENST00000414963 ZNF268Q14587 947 aaPredicted RBP15.04■□□□□ -0
SF3B1-204ENST00000414963 SMC1AQ14683 1233 aaKnown RBP15.04■□□□□ -0
SF3B1-204ENST00000414963 RAB41Q5JT25 222 aa15.04■□□□□ -0
SF3B1-204ENST00000414963 LIN9Q5TKA1 542 aa15.04■□□□□ -0
SF3B1-204ENST00000414963 PPP2R2DQ66LE6 453 aa15.04■□□□□ -0
SF3B1-204ENST00000414963 CHRDL2Q6WN34 429 aa15.04■□□□□ -0
SF3B1-204ENST00000414963 MMS22LQ6ZRQ5 1243 aa15.04■□□□□ -0
SF3B1-204ENST00000414963 PIGZQ86VD9 579 aa15.04■□□□□ -0
SF3B1-204ENST00000414963 DNAAF5Q86Y56 855 aa15.04■□□□□ -0
SF3B1-204ENST00000414963 ATAD1Q8NBU5 361 aa15.04■□□□□ -0
SF3B1-204ENST00000414963 AUTS2Q8WXX7 1259 aa15.04■□□□□ -0
SF3B1-204ENST00000414963 CALR3Q96L12 384 aaKnown RBP15.04■□□□□ -0
SF3B1-204ENST00000414963 RHOBTB2Q9BYZ6 727 aa15.04■□□□□ -0
SF3B1-204ENST00000414963 THAP2Q9H0W7 228 aa15.04■□□□□ -0
SF3B1-204ENST00000414963 TMEM30AQ9NV96 361 aa15.04■□□□□ -0
SF3B1-204ENST00000414963 ABI2Q9NYB9 513 aaPredicted RBP15.04■□□□□ -0
SF3B1-204ENST00000414963 WDR35Q9P2L0 1181 aa15.04■□□□□ -0
SF3B1-204ENST00000414963 CHD9Q3L8U1 2897 aa15.03■□□□□ -0
SF3B1-204ENST00000414963 NCANO14594 1321 aa15.03■□□□□ -0
SF3B1-204ENST00000414963 A0A0U1RQJ8 604 aa15.03■□□□□ -0
SF3B1-204ENST00000414963 TCRBV5S1A1TA0A578 114 aa15.03■□□□□ -0
SF3B1-204ENST00000414963 KRT86O43790 486 aa15.03■□□□□ -0
SF3B1-204ENST00000414963 MTA2O94776 668 aa15.03■□□□□ -0
SF3B1-204ENST00000414963 ERBB2P04626 1255 aa15.03■□□□□ -0
SF3B1-204ENST00000414963 HAPLN1P10915 354 aaPredicted RBP15.03■□□□□ -0
SF3B1-204ENST00000414963 DNAJB2P25686 324 aa15.03■□□□□ -0
SF3B1-204ENST00000414963 TUFMP49411 452 aaKnown RBP15.03■□□□□ -0
SF3B1-204ENST00000414963 HADHBP55084 474 aaKnown RBP15.03■□□□□ -0
SF3B1-204ENST00000414963 LRIT3Q3SXY7 679 aa15.03■□□□□ -0
SF3B1-204ENST00000414963 PLEKHA7Q6IQ23 1121 aa15.03■□□□□ -0
SF3B1-204ENST00000414963 LILRA6Q6PI73 481 aa15.03■□□□□ -0
SF3B1-204ENST00000414963 ZDHHC17Q8IUH5 632 aa15.03■□□□□ -0
SF3B1-204ENST00000414963 RNF10Q8N5U6 811 aaKnown RBP15.03■□□□□ -0
SF3B1-204ENST00000414963 IPO4Q8TEX9 1081 aaKnown RBP15.03■□□□□ -0
SF3B1-204ENST00000414963 ATRIPQ8WXE1 791 aa15.03■□□□□ -0
SF3B1-204ENST00000414963 MCRS1Q96EZ8 462 aa15.03■□□□□ -0
SF3B1-204ENST00000414963 SPATA17Q96L03 361 aa15.03■□□□□ -0
SF3B1-204ENST00000414963 KLHL5Q96PQ7 755 aa15.03■□□□□ -0
SF3B1-204ENST00000414963 KCNK16Q96T55 309 aa15.03■□□□□ -0
SF3B1-204ENST00000414963 C11orf70Q9BRQ4 267 aa15.03■□□□□ -0
SF3B1-204ENST00000414963 EMILIN2Q9BXX0 1053 aa15.03■□□□□ -0
SF3B1-204ENST00000414963 ENTPD7Q9NQZ7 604 aa15.03■□□□□ -0
SF3B1-204ENST00000414963 TRMT1Q9NXH9 659 aaKnown RBP15.03■□□□□ -0
SF3B1-204ENST00000414963 MTUS1Q9ULD2 1270 aa15.03■□□□□ -0
SF3B1-204ENST00000414963 RANBP2P49792 3224 aaKnown RBP15.02■□□□□ -0
SF3B1-204ENST00000414963 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP15.02■□□□□ -0
SF3B1-204ENST00000414963 USP27XA6NNY8 438 aa15.02■□□□□ -0
SF3B1-204ENST00000414963 E5RJQ4 531 aa15.02■□□□□ -0
SF3B1-204ENST00000414963 F8VP50 259 aa15.02■□□□□ -0
SF3B1-204ENST00000414963 TNFRSF10BO14763 440 aa15.02■□□□□ -0
SF3B1-204ENST00000414963 TRIM66O15016 1216 aa15.02■□□□□ -0
SF3B1-204ENST00000414963 ADH1AP07327 375 aa15.02■□□□□ -0
SF3B1-204ENST00000414963 ABCB4P21439 1286 aa15.02■□□□□ -0
SF3B1-204ENST00000414963 RRM1P23921 792 aa15.02■□□□□ -0
SF3B1-204ENST00000414963 SCNN1AP37088 669 aa15.02■□□□□ -0
SF3B1-204ENST00000414963 GRIK1P39086 918 aa15.02■□□□□ -0
SF3B1-204ENST00000414963 RPL10AP62906 217 aaKnown RBP15.02■□□□□ -0
SF3B1-204ENST00000414963 ADCY1Q08828 1119 aa15.02■□□□□ -0
SF3B1-204ENST00000414963 DUSP4Q13115 394 aa15.02■□□□□ -0
SF3B1-204ENST00000414963 XYLT1Q86Y38 959 aa15.02■□□□□ -0
SF3B1-204ENST00000414963 RHOT2Q8IXI1 618 aa15.02■□□□□ -0
SF3B1-204ENST00000414963 TCEAL8Q8IYN2 117 aa15.02■□□□□ -0
SF3B1-204ENST00000414963 SCML4Q8N228 414 aa15.02■□□□□ -0
SF3B1-204ENST00000414963 C3orf20Q8ND61 904 aa15.02■□□□□ -0
SF3B1-204ENST00000414963 RFFLQ8WZ73 363 aa15.02■□□□□ -0
SF3B1-204ENST00000414963 TIFAQ96CG3 184 aa15.02■□□□□ -0
SF3B1-204ENST00000414963 ZNF653Q96CK0 615 aa15.02■□□□□ -0
SF3B1-204ENST00000414963 ARHGEF26Q96DR7 871 aa15.02■□□□□ -0
SF3B1-204ENST00000414963 PGLYRP2Q96PD5 576 aa15.02■□□□□ -0
SF3B1-204ENST00000414963 CRISPLD1Q9H336 500 aa15.02■□□□□ -0
SF3B1-204ENST00000414963 SYNCQ9H7C4 482 aa15.02■□□□□ -0
SF3B1-204ENST00000414963 PARVAQ9NVD7 372 aa15.02■□□□□ -0
SF3B1-204ENST00000414963 IL37Q9NZH6 218 aa15.02■□□□□ -0
SF3B1-204ENST00000414963 UVRAGQ9P2Y5 699 aa15.02■□□□□ -0
SF3B1-204ENST00000414963 CNOT8Q9UFF9 292 aaKnown RBP15.02■□□□□ -0
SF3B1-204ENST00000414963 TFR2Q9UP52 801 aa15.02■□□□□ -0
SF3B1-204ENST00000414963 DUSP10Q9Y6W6 482 aa15.02■□□□□ -0
SF3B1-204ENST00000414963 NLRC5Q86WI3 1866 aa15.01□□□□□ -0.01
SF3B1-204ENST00000414963 HIDE1A8MVS5 230 aa15.01□□□□□ -0.01
SF3B1-204ENST00000414963 PAPSS1O43252 624 aaPredicted RBP15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms