RNA–Protein interactions for RNA: ENST00000414672.5

RHBDD3-204, Transcript of rhomboid domain containing 3, humanhuman

TSL 5

Gene RHBDD3, Length 900 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3-204ENST00000414672 CLIC4Q9Y696 253 aa23.03■■□□□ 1.28
RHBDD3-204ENST00000414672 OBSL1O75147 1896 aa23.02■■□□□ 1.28
RHBDD3-204ENST00000414672 VPS37CA5D8V6 355 aaPredicted RBP23.02■■□□□ 1.28
RHBDD3-204ENST00000414672 ALDH1A2O94788 518 aa23.02■■□□□ 1.28
RHBDD3-204ENST00000414672 TNNC2P02585 160 aa23.02■■□□□ 1.28
RHBDD3-204ENST00000414672 TCF3P15923 654 aa23.02■■□□□ 1.28
RHBDD3-204ENST00000414672 BCKDHBP21953 392 aa23.02■■□□□ 1.28
RHBDD3-204ENST00000414672 OPRD1P41143 372 aa23.02■■□□□ 1.28
RHBDD3-204ENST00000414672 ALCAMQ13740 583 aa23.02■■□□□ 1.28
RHBDD3-204ENST00000414672 MAPRE1Q15691 268 aaKnown RBP23.02■■□□□ 1.28
RHBDD3-204ENST00000414672 UAP1L1Q3KQV9 507 aa23.02■■□□□ 1.28
RHBDD3-204ENST00000414672 VSTM1Q6UX27 236 aa23.02■■□□□ 1.28
RHBDD3-204ENST00000414672 DENND5BQ6ZUT9 1274 aa23.02■■□□□ 1.28
RHBDD3-204ENST00000414672 DPH6Q7L8W6 267 aa23.02■■□□□ 1.28
RHBDD3-204ENST00000414672 GPD1LQ8N335 351 aa23.02■■□□□ 1.28
RHBDD3-204ENST00000414672 PIGKQ92643 395 aa23.02■■□□□ 1.28
RHBDD3-204ENST00000414672 CNOT6LQ96LI5 555 aaKnown RBP23.02■■□□□ 1.28
RHBDD3-204ENST00000414672 MMS19Q96T76 1030 aa23.02■■□□□ 1.28
RHBDD3-204ENST00000414672 OLFML3Q9NRN5 406 aa23.02■■□□□ 1.28
RHBDD3-204ENST00000414672 MMP17Q9ULZ9 603 aa23.02■■□□□ 1.28
RHBDD3-204ENST00000414672 LAMA1P25391 3075 aa23.01■■□□□ 1.27
RHBDD3-204ENST00000414672 C1QTNF9BB2RNN3 333 aa23.01■■□□□ 1.27
RHBDD3-204ENST00000414672 PATE3B3GLJ2 98 aa23.01■■□□□ 1.27
RHBDD3-204ENST00000414672 MAP3K13O43283 966 aa23.01■■□□□ 1.27
RHBDD3-204ENST00000414672 C1QTNF9P0C862 333 aa23.01■■□□□ 1.27
RHBDD3-204ENST00000414672 FILIP1Q7Z7B0 1213 aa23.01■■□□□ 1.27
RHBDD3-204ENST00000414672 RASSF3Q86WH2 238 aa23.01■■□□□ 1.27
RHBDD3-204ENST00000414672 CLIC6Q96NY7 704 aa23.01■■□□□ 1.27
RHBDD3-204ENST00000414672 PANK2Q9BZ23 570 aa23.01■■□□□ 1.27
RHBDD3-204ENST00000414672 CRTAC1Q9NQ79 661 aa23.01■■□□□ 1.27
RHBDD3-204ENST00000414672 PANK4Q9NVE7 773 aa23.01■■□□□ 1.27
RHBDD3-204ENST00000414672 INTS13Q9NVM9 706 aa23.01■■□□□ 1.27
RHBDD3-204ENST00000414672 SMPD4Q9NXE4 827 aa23.01■■□□□ 1.27
RHBDD3-204ENST00000414672 EHD2Q9NZN4 543 aa23.01■■□□□ 1.27
RHBDD3-204ENST00000414672 ANTXRLA6NF34 631 aa23■■□□□ 1.27
RHBDD3-204ENST00000414672 PRPF6O94906 941 aaKnown RBP23■■□□□ 1.27
RHBDD3-204ENST00000414672 PFKLP17858 780 aa23■■□□□ 1.27
RHBDD3-204ENST00000414672 USP46P62068 366 aa23■■□□□ 1.27
RHBDD3-204ENST00000414672 ZXDBP98169 803 aa23■■□□□ 1.27
RHBDD3-204ENST00000414672 CRY1Q16526 586 aa23■■□□□ 1.27
RHBDD3-204ENST00000414672 DUOXA2Q1HG44 320 aa23■■□□□ 1.27
RHBDD3-204ENST00000414672 UNQ6494/PRO21346Q6UXR6 183 aa23■■□□□ 1.27
RHBDD3-204ENST00000414672 MDGA1Q8NFP4 955 aa23■■□□□ 1.27
RHBDD3-204ENST00000414672 OR5B17Q8NGF7 314 aa23■■□□□ 1.27
RHBDD3-204ENST00000414672 KBTBD7Q8WVZ9 684 aa23■■□□□ 1.27
RHBDD3-204ENST00000414672 FGFBP2Q9BYJ0 223 aa23■■□□□ 1.27
RHBDD3-204ENST00000414672 FBXO2Q9UK22 296 aaPredicted RBP23■■□□□ 1.27
RHBDD3-204ENST00000414672 SRPRBQ9Y5M8 271 aaKnown RBP23■■□□□ 1.27
RHBDD3-204ENST00000414672 FRYQ5TBA9 3013 aa22.99■■□□□ 1.27
RHBDD3-204ENST00000414672 ZNF233A6NK53 670 aa22.99■■□□□ 1.27
RHBDD3-204ENST00000414672 SLC9A3R1O14745 358 aaPredicted RBP22.99■■□□□ 1.27
RHBDD3-204ENST00000414672 SCAMP3O14828 347 aaKnown RBP22.99■■□□□ 1.27
RHBDD3-204ENST00000414672 TRIM66O15016 1216 aa22.99■■□□□ 1.27
RHBDD3-204ENST00000414672 CYP17A1P05093 508 aa22.99■■□□□ 1.27
RHBDD3-204ENST00000414672 SPINK2P20155 84 aa22.99■■□□□ 1.27
RHBDD3-204ENST00000414672 STAT6P42226 847 aa22.99■■□□□ 1.27
RHBDD3-204ENST00000414672 IRX4P78413 519 aa22.99■■□□□ 1.27
RHBDD3-204ENST00000414672 MRPS21P82921 87 aaKnown RBP22.99■■□□□ 1.27
RHBDD3-204ENST00000414672 CEBPZQ03701 1054 aaKnown RBP22.99■■□□□ 1.27
RHBDD3-204ENST00000414672 CCDC73Q6ZRK6 1079 aa22.99■■□□□ 1.27
RHBDD3-204ENST00000414672 HS2ST1Q7LGA3 356 aa22.99■■□□□ 1.27
RHBDD3-204ENST00000414672 ADGRG2Q8IZP9 1017 aa22.99■■□□□ 1.27
RHBDD3-204ENST00000414672 ALLCQ8N6M5 410 aa22.99■■□□□ 1.27
RHBDD3-204ENST00000414672 CEP295NLQ96MC4 621 aa22.99■■□□□ 1.27
RHBDD3-204ENST00000414672 RNF38Q9H0F5 515 aa22.99■■□□□ 1.27
RHBDD3-204ENST00000414672 SNX25Q9H3E2 840 aa22.99■■□□□ 1.27
RHBDD3-204ENST00000414672 BCCIPQ9P287 314 aaKnown RBP eCLIP22.99■■□□□ 1.27
RHBDD3-204ENST00000414672 CPQQ9Y646 472 aa22.99■■□□□ 1.27
RHBDD3-204ENST00000414672 ABCA7Q8IZY2 2146 aa22.99■■□□□ 1.27
RHBDD3-204ENST00000414672 ZNF840PA6NDX5 716 aa22.98■■□□□ 1.27
RHBDD3-204ENST00000414672 KLF8O95600 359 aaPredicted RBP22.98■■□□□ 1.27
RHBDD3-204ENST00000414672 CEACAM1P13688 526 aa22.98■■□□□ 1.27
RHBDD3-204ENST00000414672 TIE1P35590 1138 aa22.98■■□□□ 1.27
RHBDD3-204ENST00000414672 SLC6A11P48066 632 aa22.98■■□□□ 1.27
RHBDD3-204ENST00000414672 PPP3CCP48454 512 aa22.98■■□□□ 1.27
RHBDD3-204ENST00000414672 DHCR24Q15392 516 aa22.98■■□□□ 1.27
RHBDD3-204ENST00000414672 SURF1Q15526 300 aa22.98■■□□□ 1.27
RHBDD3-204ENST00000414672 MDH1BQ5I0G3 518 aa22.98■■□□□ 1.27
RHBDD3-204ENST00000414672 LPCAT2Q7L5N7 544 aa22.98■■□□□ 1.27
RHBDD3-204ENST00000414672 TXNDC5Q8NBS9 432 aaKnown RBP22.98■■□□□ 1.27
RHBDD3-204ENST00000414672 RLN3Q8WXF3 142 aa22.98■■□□□ 1.27
RHBDD3-204ENST00000414672 PCED1BQ96HM7 432 aa22.98■■□□□ 1.27
RHBDD3-204ENST00000414672 SPACA7Q96KW9 195 aa22.98■■□□□ 1.27
RHBDD3-204ENST00000414672 PNKPQ96T60 521 aa22.98■■□□□ 1.27
RHBDD3-204ENST00000414672 CFAP97Q9P2B7 532 aa22.98■■□□□ 1.27
RHBDD3-204ENST00000414672 ZMIZ1Q9ULJ6 1067 aa22.98■■□□□ 1.27
RHBDD3-204ENST00000414672 PTPRJQ12913 1337 aa22.98■■□□□ 1.27
RHBDD3-204ENST00000414672 CDX4O14627 284 aaPredicted RBP22.97■■□□□ 1.27
RHBDD3-204ENST00000414672 KIAA0391O15091 583 aaKnown RBP22.97■■□□□ 1.27
RHBDD3-204ENST00000414672 APODP05090 189 aa22.97■■□□□ 1.27
RHBDD3-204ENST00000414672 CSRP1P21291 193 aaKnown RBP22.97■■□□□ 1.27
RHBDD3-204ENST00000414672 WARSP23381 471 aaKnown RBP22.97■■□□□ 1.27
RHBDD3-204ENST00000414672 GNL1P36915 607 aaPredicted RBP22.97■■□□□ 1.27
RHBDD3-204ENST00000414672 SLC7A9P82251 487 aa22.97■■□□□ 1.27
RHBDD3-204ENST00000414672 IFRD2Q12894 506 aaPredicted RBP22.97■■□□□ 1.27
RHBDD3-204ENST00000414672 RESTQ13127 1097 aa22.97■■□□□ 1.27
RHBDD3-204ENST00000414672 GAB4Q2WGN9 574 aa22.97■■□□□ 1.27
RHBDD3-204ENST00000414672 TDRD10Q5VZ19 366 aaKnown RBP22.97■■□□□ 1.27
RHBDD3-204ENST00000414672 TMEM92Q6UXU6 159 aa22.97■■□□□ 1.27
RHBDD3-204ENST00000414672 STXBP4Q6ZWJ1 553 aa22.97■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms