RNA–Protein interactions for RNA: ENST00000413440.5

PRDM2-206, Transcript of PR/SET domain 2, humanhuman

TSL 1 (best) BASIC

Gene PRDM2, Length 6,175 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM2-206ENST00000413440 TWF1Q12792 350 aa6.07□□□□□ -1.44
PRDM2-206ENST00000413440 NME3Q13232 169 aa6.07□□□□□ -1.44
PRDM2-206ENST00000413440 SUZ12Q15022 739 aaKnown RBP6.07□□□□□ -1.44
PRDM2-206ENST00000413440 RWDD4Q6NW29 188 aaKnown RBP6.07□□□□□ -1.44
PRDM2-206ENST00000413440 UNC13DQ70J99 1090 aa6.07□□□□□ -1.44
PRDM2-206ENST00000413440 OTOP3Q7RTS5 596 aa6.07□□□□□ -1.44
PRDM2-206ENST00000413440 SCUBE3Q8IX30 993 aa6.07□□□□□ -1.44
PRDM2-206ENST00000413440 TRIM58Q8NG06 486 aa6.07□□□□□ -1.44
PRDM2-206ENST00000413440 FBXO32Q969P5 355 aa6.07□□□□□ -1.44
PRDM2-206ENST00000413440 HPDLQ96IR7 371 aa6.07□□□□□ -1.44
PRDM2-206ENST00000413440 KXD1Q9BQD3 176 aa6.07□□□□□ -1.44
PRDM2-206ENST00000413440 NDST4Q9H3R1 872 aa6.07□□□□□ -1.44
PRDM2-206ENST00000413440 DDX43Q9NXZ2 648 aaKnown RBP6.07□□□□□ -1.44
PRDM2-206ENST00000413440 UTP6Q9NYH9 597 aaKnown RBP6.07□□□□□ -1.44
PRDM2-206ENST00000413440 CNTNAP2Q9UHC6 1331 aa6.07□□□□□ -1.44
PRDM2-206ENST00000413440 LACTBL1A8MY62 500 aa6.07□□□□□ -1.44
PRDM2-206ENST00000413440 M0QYV0 167 aa6.07□□□□□ -1.44
PRDM2-206ENST00000413440 MED7O43513 233 aa6.07□□□□□ -1.44
PRDM2-206ENST00000413440 GJB5O95377 273 aa6.07□□□□□ -1.44
PRDM2-206ENST00000413440 GCLMP48507 274 aa6.07□□□□□ -1.44
PRDM2-206ENST00000413440 MRPS25P82663 173 aaKnown RBP6.07□□□□□ -1.44
PRDM2-206ENST00000413440 ATP2C1P98194 919 aaPredicted RBP6.07□□□□□ -1.44
PRDM2-206ENST00000413440 GRIN1Q05586 938 aa6.07□□□□□ -1.44
PRDM2-206ENST00000413440 WDR72Q3MJ13 1102 aa6.07□□□□□ -1.44
PRDM2-206ENST00000413440 PASD1Q8IV76 773 aa6.07□□□□□ -1.44
PRDM2-206ENST00000413440 KLHDC9Q8NEP7 349 aa6.07□□□□□ -1.44
PRDM2-206ENST00000413440 CFHR5Q9BXR6 569 aa6.07□□□□□ -1.44
PRDM2-206ENST00000413440 FAM49BQ9NUQ9 324 aa6.07□□□□□ -1.44
PRDM2-206ENST00000413440 KIF17Q9P2E2 1029 aa6.07□□□□□ -1.44
PRDM2-206ENST00000413440 PCDHB5Q9Y5E4 795 aa6.07□□□□□ -1.44
PRDM2-206ENST00000413440 MRPL42Q9Y6G3 142 aaKnown RBP6.07□□□□□ -1.44
PRDM2-206ENST00000413440 EOMESO95936 686 aa6.06□□□□□ -1.44
PRDM2-206ENST00000413440 GLRA2P23416 452 aa6.06□□□□□ -1.44
PRDM2-206ENST00000413440 PCSK1P29120 753 aa6.06□□□□□ -1.44
PRDM2-206ENST00000413440 BRCC3P46736 316 aa6.06□□□□□ -1.44
PRDM2-206ENST00000413440 PEX5P50542 639 aa6.06□□□□□ -1.44
PRDM2-206ENST00000413440 DYNLT1P63172 113 aa6.06□□□□□ -1.44
PRDM2-206ENST00000413440 PDIA5Q14554 519 aa6.06□□□□□ -1.44
PRDM2-206ENST00000413440 TEAD4Q15561 434 aa6.06□□□□□ -1.44
PRDM2-206ENST00000413440 ESRP1Q6NXG1 681 aaKnown RBP6.06□□□□□ -1.44
PRDM2-206ENST00000413440 MOXD1Q6UVY6 613 aa6.06□□□□□ -1.44
PRDM2-206ENST00000413440 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.06□□□□□ -1.44
PRDM2-206ENST00000413440 XXYLT1Q8NBI6 393 aa6.06□□□□□ -1.44
PRDM2-206ENST00000413440 ZNF653Q96CK0 615 aa6.06□□□□□ -1.44
PRDM2-206ENST00000413440 REXO5Q96IC2 774 aaKnown RBP6.06□□□□□ -1.44
PRDM2-206ENST00000413440 TNIP3Q96KP6 325 aa6.06□□□□□ -1.44
PRDM2-206ENST00000413440 CRISPLD2Q9H0B8 497 aa6.06□□□□□ -1.44
PRDM2-206ENST00000413440 SMPD4Q9NXE4 827 aa6.06□□□□□ -1.44
PRDM2-206ENST00000413440 PAX3P23760 479 aa6.06□□□□□ -1.44
PRDM2-206ENST00000413440 SOX5P35711 763 aa6.06□□□□□ -1.44
PRDM2-206ENST00000413440 KYNUQ16719 465 aa6.06□□□□□ -1.44
PRDM2-206ENST00000413440 RINT1Q6NUQ1 792 aa6.06□□□□□ -1.44
PRDM2-206ENST00000413440 FUT10Q6P4F1 479 aa6.06□□□□□ -1.44
PRDM2-206ENST00000413440 SYTL1Q8IYJ3 562 aa6.06□□□□□ -1.44
PRDM2-206ENST00000413440 ATL2Q8NHH9 583 aa6.06□□□□□ -1.44
PRDM2-206ENST00000413440 SLITRK1Q96PX8 696 aa6.06□□□□□ -1.44
PRDM2-206ENST00000413440 UPF3AQ9H1J1 476 aaKnown RBP6.06□□□□□ -1.44
PRDM2-206ENST00000413440 MIR1-1HGQ9H1L0 117 aa6.06□□□□□ -1.44
PRDM2-206ENST00000413440 TMEM161AQ9NX61 479 aa6.06□□□□□ -1.44
PRDM2-206ENST00000413440 FBXO10Q9UK96 956 aa6.06□□□□□ -1.44
PRDM2-206ENST00000413440 MYMKA6NI61 221 aa6.06□□□□□ -1.44
PRDM2-206ENST00000413440 PSMD10O75832 226 aa6.06□□□□□ -1.44
PRDM2-206ENST00000413440 DDHD2O94830 711 aa6.06□□□□□ -1.44
PRDM2-206ENST00000413440 CLNS1AP54105 237 aaKnown RBP6.06□□□□□ -1.44
PRDM2-206ENST00000413440 TFF2Q03403 129 aa6.06□□□□□ -1.44
PRDM2-206ENST00000413440 PTK2Q05397 1052 aa6.06□□□□□ -1.44
PRDM2-206ENST00000413440 GRM2Q14416 872 aa6.06□□□□□ -1.44
PRDM2-206ENST00000413440 PABPC1LQ4VXU2 614 aaKnown RBP6.06□□□□□ -1.44
PRDM2-206ENST00000413440 THEMIS2Q5TEJ8 643 aa6.06□□□□□ -1.44
PRDM2-206ENST00000413440 FAM76AQ8TAV0 307 aa6.06□□□□□ -1.44
PRDM2-206ENST00000413440 CCHCR1Q8TD31 782 aa6.06□□□□□ -1.44
PRDM2-206ENST00000413440 MGARPQ8TDB4 240 aa6.06□□□□□ -1.44
PRDM2-206ENST00000413440 RSAD2Q8WXG1 361 aa6.06□□□□□ -1.44
PRDM2-206ENST00000413440 FATE1Q969F0 183 aa6.06□□□□□ -1.44
PRDM2-206ENST00000413440 ZBTB45Q96K62 511 aaPredicted RBP6.06□□□□□ -1.44
PRDM2-206ENST00000413440 CCT7Q99832 543 aa6.06□□□□□ -1.44
PRDM2-206ENST00000413440 SPON2Q9BUD6 331 aa6.06□□□□□ -1.44
PRDM2-206ENST00000413440 MTMR12Q9C0I1 747 aa6.06□□□□□ -1.44
PRDM2-206ENST00000413440 FBXL5Q9UKA1 691 aa6.06□□□□□ -1.44
PRDM2-206ENST00000413440 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.06□□□□□ -1.44
PRDM2-206ENST00000413440 EXTL3O43909 919 aa6.06□□□□□ -1.44
PRDM2-206ENST00000413440 PNPLA4P41247 253 aa6.06□□□□□ -1.44
PRDM2-206ENST00000413440 GRB10Q13322 594 aa6.06□□□□□ -1.44
PRDM2-206ENST00000413440 MIIPQ5JXC2 388 aa6.06□□□□□ -1.44
PRDM2-206ENST00000413440 DCLRE1AQ6PJP8 1040 aa6.06□□□□□ -1.44
PRDM2-206ENST00000413440 USP49Q70CQ1 688 aa6.06□□□□□ -1.44
PRDM2-206ENST00000413440 ZNF579Q8NAF0 562 aaKnown RBP6.06□□□□□ -1.44
PRDM2-206ENST00000413440 MOCOSQ96EN8 888 aa6.06□□□□□ -1.44
PRDM2-206ENST00000413440 KRT12Q99456 494 aa6.06□□□□□ -1.44
PRDM2-206ENST00000413440 VPS37BQ9H9H4 285 aa6.06□□□□□ -1.44
PRDM2-206ENST00000413440 PLCB1Q9NQ66 1216 aa6.06□□□□□ -1.44
PRDM2-206ENST00000413440 TRPM5Q9NZQ8 1165 aa6.06□□□□□ -1.44
PRDM2-206ENST00000413440 CDY1Q9Y6F8 540 aa6.06□□□□□ -1.44
PRDM2-206ENST00000413440 NRP1O14786 923 aa6.06□□□□□ -1.44
PRDM2-206ENST00000413440 ACTN4O43707 911 aaKnown RBP6.06□□□□□ -1.44
PRDM2-206ENST00000413440 SLC4A1P02730 911 aa6.06□□□□□ -1.44
PRDM2-206ENST00000413440 NR3C1P04150 777 aa6.06□□□□□ -1.44
PRDM2-206ENST00000413440 MCF2P10911 925 aa6.06□□□□□ -1.44
PRDM2-206ENST00000413440 FXR2P51116 673 aaKnown RBP eCLIP6.06□□□□□ -1.44
PRDM2-206ENST00000413440 VAMP7P51809 220 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms