RNA–Protein interactions for RNA: ENST00000411809.6

CLINT1-201, Transcript of clathrin interactor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLINT1, Length 3,440 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLINT1-201ENST00000411809 IFT122Q9HBG6 1241 aa13.65□□□□□ -0.22
CLINT1-201ENST00000411809 ADARB2Q9NS39 739 aaKnown RBP13.65□□□□□ -0.22
CLINT1-201ENST00000411809 NMRK1Q9NWW6 199 aa13.65□□□□□ -0.22
CLINT1-201ENST00000411809 SIX4Q9UIU6 781 aa13.65□□□□□ -0.22
CLINT1-201ENST00000411809 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.65□□□□□ -0.22
CLINT1-201ENST00000411809 LRRC42Q9Y546 428 aa13.65□□□□□ -0.22
CLINT1-201ENST00000411809 NVLO15381 856 aaKnown RBP13.64□□□□□ -0.23
CLINT1-201ENST00000411809 DCTN3O75935 186 aa13.64□□□□□ -0.23
CLINT1-201ENST00000411809 PECAM1P16284 738 aaPredicted RBP13.64□□□□□ -0.23
CLINT1-201ENST00000411809 ATP6V1C1P21283 382 aa13.64□□□□□ -0.23
CLINT1-201ENST00000411809 MIPEPQ99797 713 aa13.64□□□□□ -0.23
CLINT1-201ENST00000411809 OSBPL8Q9BZF1 889 aa13.64□□□□□ -0.23
CLINT1-201ENST00000411809 NIF3L1Q9GZT8 377 aa13.64□□□□□ -0.23
CLINT1-201ENST00000411809 VRTNQ9H8Y1 702 aa13.64□□□□□ -0.23
CLINT1-201ENST00000411809 FBXO6Q9NRD1 293 aaPredicted RBP13.64□□□□□ -0.23
CLINT1-201ENST00000411809 CISHQ9NSE2 258 aa13.64□□□□□ -0.23
CLINT1-201ENST00000411809 LGALS13Q9UHV8 139 aa13.64□□□□□ -0.23
CLINT1-201ENST00000411809 STARD13Q9Y3M8 1113 aa13.64□□□□□ -0.23
CLINT1-201ENST00000411809 C2CD2Q9Y426 696 aa13.64□□□□□ -0.23
CLINT1-201ENST00000411809 ACKR2O00590 384 aa13.64□□□□□ -0.23
CLINT1-201ENST00000411809 LIASO43766 372 aa13.64□□□□□ -0.23
CLINT1-201ENST00000411809 EDF1O60869 148 aaKnown RBP13.64□□□□□ -0.23
CLINT1-201ENST00000411809 PAPOLAP51003 745 aaKnown RBP13.64□□□□□ -0.23
CLINT1-201ENST00000411809 ARSEP51690 589 aa13.64□□□□□ -0.23
CLINT1-201ENST00000411809 CAV1Q03135 178 aa13.64□□□□□ -0.23
CLINT1-201ENST00000411809 GAD2Q05329 585 aa13.64□□□□□ -0.23
CLINT1-201ENST00000411809 KPNB1Q14974 876 aaKnown RBP13.64□□□□□ -0.23
CLINT1-201ENST00000411809 OASLQ15646 514 aaKnown RBP13.64□□□□□ -0.23
CLINT1-201ENST00000411809 MDH1BQ5I0G3 518 aa13.64□□□□□ -0.23
CLINT1-201ENST00000411809 MPZL3Q6UWV2 235 aa13.64□□□□□ -0.23
CLINT1-201ENST00000411809 TRIM50Q86XT4 487 aa13.64□□□□□ -0.23
CLINT1-201ENST00000411809 MAK16Q9BXY0 300 aaKnown RBP13.64□□□□□ -0.23
CLINT1-201ENST00000411809 LHX5Q9H2C1 402 aa13.64□□□□□ -0.23
CLINT1-201ENST00000411809 MINDY3Q9H8M7 445 aa13.64□□□□□ -0.23
CLINT1-201ENST00000411809 IP6K2Q9UHH9 426 aa13.64□□□□□ -0.23
CLINT1-201ENST00000411809 DNPEPQ9ULA0 475 aa13.64□□□□□ -0.23
CLINT1-201ENST00000411809 KIF3CO14782 793 aa13.64□□□□□ -0.23
CLINT1-201ENST00000411809 C22orf31O95567 290 aa13.64□□□□□ -0.23
CLINT1-201ENST00000411809 PRKCBP05771 671 aa13.64□□□□□ -0.23
CLINT1-201ENST00000411809 SKIV2L2P42285 1042 aaKnown RBP13.64□□□□□ -0.23
CLINT1-201ENST00000411809 SLC26A2P50443 739 aa13.64□□□□□ -0.23
CLINT1-201ENST00000411809 CBLBQ13191 982 aa13.64□□□□□ -0.23
CLINT1-201ENST00000411809 RBBP5Q15291 538 aaKnown RBP13.64□□□□□ -0.23
CLINT1-201ENST00000411809 MAPK6Q16659 721 aa13.64□□□□□ -0.23
CLINT1-201ENST00000411809 SGSM1Q2NKQ1 1148 aa13.64□□□□□ -0.23
CLINT1-201ENST00000411809 LIN9Q5TKA1 542 aa13.64□□□□□ -0.23
CLINT1-201ENST00000411809 VPS52Q8N1B4 723 aa13.64□□□□□ -0.23
CLINT1-201ENST00000411809 MCUR1Q96AQ8 359 aa13.64□□□□□ -0.23
CLINT1-201ENST00000411809 CLMNQ96JQ2 1002 aa13.64□□□□□ -0.23
CLINT1-201ENST00000411809 KATNBL1Q9H079 304 aa13.64□□□□□ -0.23
CLINT1-201ENST00000411809 CPSF2Q9P2I0 782 aaKnown RBP13.64□□□□□ -0.23
CLINT1-201ENST00000411809 SCN4AP35499 1836 aa13.63□□□□□ -0.23
CLINT1-201ENST00000411809 CAPN9O14815 690 aa13.63□□□□□ -0.23
CLINT1-201ENST00000411809 MARK3P27448 753 aa13.63□□□□□ -0.23
CLINT1-201ENST00000411809 GCAP28676 217 aa13.63□□□□□ -0.23
CLINT1-201ENST00000411809 DYNLT1P63172 113 aa13.63□□□□□ -0.23
CLINT1-201ENST00000411809 SLC25A11Q02978 314 aaKnown RBP13.63□□□□□ -0.23
CLINT1-201ENST00000411809 PDIA2Q13087 525 aaKnown RBP13.63□□□□□ -0.23
CLINT1-201ENST00000411809 ACVR2BQ13705 512 aa13.63□□□□□ -0.23
CLINT1-201ENST00000411809 PARP6Q2NL67 630 aa13.63□□□□□ -0.23
CLINT1-201ENST00000411809 SNX30Q5VWJ9 437 aa13.63□□□□□ -0.23
CLINT1-201ENST00000411809 TXNRD3NBQ6F5E7 133 aa13.63□□□□□ -0.23
CLINT1-201ENST00000411809 EXOC8Q8IYI6 725 aa13.63□□□□□ -0.23
CLINT1-201ENST00000411809 PHC3Q8NDX5 983 aa13.63□□□□□ -0.23
CLINT1-201ENST00000411809 ZNF75CPQ92670 426 aaPredicted RBP13.63□□□□□ -0.23
CLINT1-201ENST00000411809 CFAP57Q96MR6 1250 aa13.63□□□□□ -0.23
CLINT1-201ENST00000411809 ARMCX1Q9P291 453 aa13.63□□□□□ -0.23
CLINT1-201ENST00000411809 SAE1Q9UBE0 346 aaPredicted RBP13.63□□□□□ -0.23
CLINT1-201ENST00000411809 RBM47A0AV96 593 aaKnown RBP13.63□□□□□ -0.23
CLINT1-201ENST00000411809 TLR3O15455 904 aaKnown RBP13.63□□□□□ -0.23
CLINT1-201ENST00000411809 LRRC6Q86X45 466 aa13.63□□□□□ -0.23
CLINT1-201ENST00000411809 ERO1BQ86YB8 467 aa13.63□□□□□ -0.23
CLINT1-201ENST00000411809 C10orf82Q8WW14 230 aa13.63□□□□□ -0.23
CLINT1-201ENST00000411809 SDCBP2Q9H190 292 aa13.63□□□□□ -0.23
CLINT1-201ENST00000411809 C2orf40Q9H1Z8 148 aa13.63□□□□□ -0.23
CLINT1-201ENST00000411809 ARL8BQ9NVJ2 186 aa13.63□□□□□ -0.23
CLINT1-201ENST00000411809 HEY2Q9UBP5 337 aa13.63□□□□□ -0.23
CLINT1-201ENST00000411809 TNFSF13BQ9Y275 285 aa13.63□□□□□ -0.23
CLINT1-201ENST00000411809 SNUPNO95149 360 aaKnown RBP13.62□□□□□ -0.23
CLINT1-201ENST00000411809 UBTFL6P0CB48 400 aaPredicted RBP13.62□□□□□ -0.23
CLINT1-201ENST00000411809 SSTR1P30872 391 aa13.62□□□□□ -0.23
CLINT1-201ENST00000411809 GABRB2P47870 512 aa13.62□□□□□ -0.23
CLINT1-201ENST00000411809 RASSF2P50749 326 aa13.62□□□□□ -0.23
CLINT1-201ENST00000411809 NFX1Q12986 1120 aaKnown RBP13.62□□□□□ -0.23
CLINT1-201ENST00000411809 PPIL2Q13356 520 aa13.62□□□□□ -0.23
CLINT1-201ENST00000411809 TMEM192Q8IY95 271 aa13.62□□□□□ -0.23
CLINT1-201ENST00000411809 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.62□□□□□ -0.23
CLINT1-201ENST00000411809 SCG3Q8WXD2 468 aaKnown RBP13.62□□□□□ -0.23
CLINT1-201ENST00000411809 CADM1Q9BY67 442 aaKnown RBP13.62□□□□□ -0.23
CLINT1-201ENST00000411809 GYG2O15488 501 aa13.62□□□□□ -0.23
CLINT1-201ENST00000411809 B4GALT5O43286 388 aa13.62□□□□□ -0.23
CLINT1-201ENST00000411809 ATP5HO75947 161 aa13.62□□□□□ -0.23
CLINT1-201ENST00000411809 CALB1P05937 261 aa13.62□□□□□ -0.23
CLINT1-201ENST00000411809 PGK2P07205 417 aa13.62□□□□□ -0.23
CLINT1-201ENST00000411809 ZCCHC18P0CG32 403 aa13.62□□□□□ -0.23
CLINT1-201ENST00000411809 CETN2P41208 172 aa13.62□□□□□ -0.23
CLINT1-201ENST00000411809 CDKN2BP42772 138 aa13.62□□□□□ -0.23
CLINT1-201ENST00000411809 SURF1Q15526 300 aa13.62□□□□□ -0.23
CLINT1-201ENST00000411809 DUOXA2Q1HG44 320 aa13.62□□□□□ -0.23
CLINT1-201ENST00000411809 WDR72Q3MJ13 1102 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 99.7 ms