RNA–Protein interactions for RNA: ENST00000411464.3

MRPL55-220, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 767 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-220ENST00000411464 MMS19Q96T76 1030 aa17.86■□□□□ 0.45
MRPL55-220ENST00000411464 PANK2Q9BZ23 570 aa17.86■□□□□ 0.45
MRPL55-220ENST00000411464 RALGAPA1Q6GYQ0 2036 aa17.86■□□□□ 0.45
MRPL55-220ENST00000411464 CNOT1A5YKK6 2376 aaKnown RBP17.86■□□□□ 0.45
MRPL55-220ENST00000411464 LNP1A1A4G5 178 aa17.85■□□□□ 0.45
MRPL55-220ENST00000411464 TRIM66O15016 1216 aa17.85■□□□□ 0.45
MRPL55-220ENST00000411464 ALDH1A2O94788 518 aa17.85■□□□□ 0.45
MRPL55-220ENST00000411464 ABL1P00519 1130 aa17.85■□□□□ 0.45
MRPL55-220ENST00000411464 PDCP20941 246 aa17.85■□□□□ 0.45
MRPL55-220ENST00000411464 LAMA1P25391 3075 aa17.85■□□□□ 0.45
MRPL55-220ENST00000411464 OPRD1P41143 372 aa17.85■□□□□ 0.45
MRPL55-220ENST00000411464 CEBPZQ03701 1054 aaKnown RBP17.85■□□□□ 0.45
MRPL55-220ENST00000411464 CRY1Q16526 586 aa17.85■□□□□ 0.45
MRPL55-220ENST00000411464 CFAP47Q6ZTR5 3102 aa17.85■□□□□ 0.45
MRPL55-220ENST00000411464 STXBP4Q6ZWJ1 553 aa17.85■□□□□ 0.45
MRPL55-220ENST00000411464 LIMS2Q7Z4I7 341 aa17.85■□□□□ 0.45
MRPL55-220ENST00000411464 RASSF3Q86WH2 238 aa17.85■□□□□ 0.45
MRPL55-220ENST00000411464 OR5B17Q8NGF7 314 aa17.85■□□□□ 0.45
MRPL55-220ENST00000411464 CNOT6LQ96LI5 555 aaKnown RBP17.85■□□□□ 0.45
MRPL55-220ENST00000411464 FGFBP2Q9BYJ0 223 aa17.85■□□□□ 0.45
MRPL55-220ENST00000411464 TMEM9BQ9NQ34 198 aa17.85■□□□□ 0.45
MRPL55-220ENST00000411464 CRTAC1Q9NQ79 661 aa17.85■□□□□ 0.45
MRPL55-220ENST00000411464 MMP17Q9ULZ9 603 aa17.85■□□□□ 0.45
MRPL55-220ENST00000411464 FRMD3A2A2Y4 597 aa17.84■□□□□ 0.45
MRPL55-220ENST00000411464 ZNF840PA6NDX5 716 aa17.84■□□□□ 0.45
MRPL55-220ENST00000411464 SLC9A3R1O14745 358 aaPredicted RBP17.84■□□□□ 0.45
MRPL55-220ENST00000411464 PROS1P07225 676 aa17.84■□□□□ 0.45
MRPL55-220ENST00000411464 WARSP23381 471 aaKnown RBP17.84■□□□□ 0.45
MRPL55-220ENST00000411464 GNL1P36915 607 aaPredicted RBP17.84■□□□□ 0.45
MRPL55-220ENST00000411464 DHPSP49366 369 aaPredicted RBP17.84■□□□□ 0.45
MRPL55-220ENST00000411464 USP46P62068 366 aa17.84■□□□□ 0.45
MRPL55-220ENST00000411464 SLC7A9P82251 487 aa17.84■□□□□ 0.45
MRPL55-220ENST00000411464 MRPS21P82921 87 aaKnown RBP17.84■□□□□ 0.45
MRPL55-220ENST00000411464 ZXDBP98169 803 aa17.84■□□□□ 0.45
MRPL55-220ENST00000411464 SH3PXD2AQ5TCZ1 1133 aa17.84■□□□□ 0.45
MRPL55-220ENST00000411464 HS2ST1Q7LGA3 356 aa17.84■□□□□ 0.45
MRPL55-220ENST00000411464 FILIP1Q7Z7B0 1213 aa17.84■□□□□ 0.45
MRPL55-220ENST00000411464 CCDC65Q8IXS2 484 aa17.84■□□□□ 0.45
MRPL55-220ENST00000411464 ADGRG2Q8IZP9 1017 aa17.84■□□□□ 0.45
MRPL55-220ENST00000411464 KIAA1958Q8N8K9 716 aa17.84■□□□□ 0.45
MRPL55-220ENST00000411464 MYCBPAPQ8TBZ2 947 aa17.84■□□□□ 0.45
MRPL55-220ENST00000411464 PCED1BQ96HM7 432 aa17.84■□□□□ 0.45
MRPL55-220ENST00000411464 SNX25Q9H3E2 840 aa17.84■□□□□ 0.45
MRPL55-220ENST00000411464 CIZ1Q9ULV3 898 aaPredicted RBP17.84■□□□□ 0.45
MRPL55-220ENST00000411464 USP24Q9UPU5 2620 aa17.83■□□□□ 0.44
MRPL55-220ENST00000411464 GIPC1O14908 333 aa17.83■□□□□ 0.44
MRPL55-220ENST00000411464 MAP3K13O43283 966 aa17.83■□□□□ 0.44
MRPL55-220ENST00000411464 NOP14P78316 857 aaKnown RBP17.83■□□□□ 0.44
MRPL55-220ENST00000411464 ZNF252P-AS1Q0IIN9 211 aa17.83■□□□□ 0.44
MRPL55-220ENST00000411464 DHCR24Q15392 516 aa17.83■□□□□ 0.44
MRPL55-220ENST00000411464 TDRD10Q5VZ19 366 aaKnown RBP17.83■□□□□ 0.44
MRPL55-220ENST00000411464 CBWD2Q8IUF1 395 aa17.83■□□□□ 0.44
MRPL55-220ENST00000411464 MDGA1Q8NFP4 955 aa17.83■□□□□ 0.44
MRPL55-220ENST00000411464 PIGKQ92643 395 aa17.83■□□□□ 0.44
MRPL55-220ENST00000411464 PNKPQ96T60 521 aa17.83■□□□□ 0.44
MRPL55-220ENST00000411464 TTLL2Q9BWV7 592 aa17.83■□□□□ 0.44
MRPL55-220ENST00000411464 RNF38Q9H0F5 515 aa17.83■□□□□ 0.44
MRPL55-220ENST00000411464 KIAA1586Q9HCI6 787 aa17.83■□□□□ 0.44
MRPL55-220ENST00000411464 SMPD4Q9NXE4 827 aa17.83■□□□□ 0.44
MRPL55-220ENST00000411464 CPQQ9Y646 472 aa17.83■□□□□ 0.44
MRPL55-220ENST00000411464 GREB1Q4ZG55 1949 aa17.82■□□□□ 0.44
MRPL55-220ENST00000411464 KIF26AQ9ULI4 1882 aaPredicted RBP17.82■□□□□ 0.44
MRPL55-220ENST00000411464 ZFHX4Q86UP3 3567 aa17.82■□□□□ 0.44
MRPL55-220ENST00000411464 PTPRJQ12913 1337 aa17.82■□□□□ 0.44
MRPL55-220ENST00000411464 F8VP50 259 aa17.82■□□□□ 0.44
MRPL55-220ENST00000411464 CYP17A1P05093 508 aa17.82■□□□□ 0.44
MRPL55-220ENST00000411464 CEACAM1P13688 526 aa17.82■□□□□ 0.44
MRPL55-220ENST00000411464 BCKDHBP21953 392 aa17.82■□□□□ 0.44
MRPL55-220ENST00000411464 FOXC1Q12948 553 aa17.82■□□□□ 0.44
MRPL55-220ENST00000411464 MDH1BQ5I0G3 518 aa17.82■□□□□ 0.44
MRPL55-220ENST00000411464 LPCAT2Q7L5N7 544 aa17.82■□□□□ 0.44
MRPL55-220ENST00000411464 WDR49Q8IV35 697 aa17.82■□□□□ 0.44
MRPL55-220ENST00000411464 OR6B3Q8NGW1 331 aa17.82■□□□□ 0.44
MRPL55-220ENST00000411464 C8orf48Q96LL4 319 aa17.82■□□□□ 0.44
MRPL55-220ENST00000411464 SLITRK1Q96PX8 696 aa17.82■□□□□ 0.44
MRPL55-220ENST00000411464 POLMQ9NP87 494 aaPredicted RBP17.82■□□□□ 0.44
MRPL55-220ENST00000411464 ANTXRLA6NF34 631 aa17.81■□□□□ 0.44
MRPL55-220ENST00000411464 PATE3B3GLJ2 98 aa17.81■□□□□ 0.44
MRPL55-220ENST00000411464 CDX4O14627 284 aaPredicted RBP17.81■□□□□ 0.44
MRPL55-220ENST00000411464 KLF8O95600 359 aaPredicted RBP17.81■□□□□ 0.44
MRPL55-220ENST00000411464 ADH1CP00326 375 aa17.81■□□□□ 0.44
MRPL55-220ENST00000411464 APODP05090 189 aa17.81■□□□□ 0.44
MRPL55-220ENST00000411464 CSRP1P21291 193 aaKnown RBP17.81■□□□□ 0.44
MRPL55-220ENST00000411464 TIE1P35590 1138 aa17.81■□□□□ 0.44
MRPL55-220ENST00000411464 EIF2DP41214 584 aaKnown RBP17.81■□□□□ 0.44
MRPL55-220ENST00000411464 SLC6A11P48066 632 aa17.81■□□□□ 0.44
MRPL55-220ENST00000411464 IRX4P78413 519 aa17.81■□□□□ 0.44
MRPL55-220ENST00000411464 TAF10Q12962 218 aa17.81■□□□□ 0.44
MRPL55-220ENST00000411464 GAB4Q2WGN9 574 aa17.81■□□□□ 0.44
MRPL55-220ENST00000411464 UAP1L1Q3KQV9 507 aa17.81■□□□□ 0.44
MRPL55-220ENST00000411464 HSF5Q4G112 596 aaPredicted RBP17.81■□□□□ 0.44
MRPL55-220ENST00000411464 FAM173BQ6P4H8 233 aa17.81■□□□□ 0.44
MRPL55-220ENST00000411464 TMEM92Q6UXU6 159 aa17.81■□□□□ 0.44
MRPL55-220ENST00000411464 TRAPPC11Q7Z392 1133 aa17.81■□□□□ 0.44
MRPL55-220ENST00000411464 DDX42Q86XP3 938 aaKnown RBP eCLIP17.81■□□□□ 0.44
MRPL55-220ENST00000411464 ALLCQ8N6M5 410 aa17.81■□□□□ 0.44
MRPL55-220ENST00000411464 TXNDC5Q8NBS9 432 aaKnown RBP17.81■□□□□ 0.44
MRPL55-220ENST00000411464 WHAMMQ8TF30 809 aa17.81■□□□□ 0.44
MRPL55-220ENST00000411464 SPACA7Q96KW9 195 aa17.81■□□□□ 0.44
MRPL55-220ENST00000411464 MRPL45Q9BRJ2 306 aaKnown RBP17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms