RNA–Protein interactions for RNA: ENST00000410080.5

PRPF40A-202, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PRPF40A, Length 8,048 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-202ENST00000410080 CALML6Q8TD86 181 aa11.64□□□□□ -0.55
PRPF40A-202ENST00000410080 CAMKK2Q96RR4 588 aa11.64□□□□□ -0.55
PRPF40A-202ENST00000410080 ABCB6Q9NP58 842 aa11.64□□□□□ -0.55
PRPF40A-202ENST00000410080 GPN3Q9UHW5 284 aaPredicted RBP11.64□□□□□ -0.55
PRPF40A-202ENST00000410080 ADAM21Q9UKJ8 722 aa11.64□□□□□ -0.55
PRPF40A-202ENST00000410080 TBKBP1A7MCY6 615 aa11.64□□□□□ -0.55
PRPF40A-202ENST00000410080 PARNO95453 639 aaKnown RBP11.64□□□□□ -0.55
PRPF40A-202ENST00000410080 RBBP4Q09028 425 aa11.64□□□□□ -0.55
PRPF40A-202ENST00000410080 SNRNP35Q16560 246 aaKnown RBP11.64□□□□□ -0.55
PRPF40A-202ENST00000410080 NBPF9Q3BBW0 867 aa11.64□□□□□ -0.55
PRPF40A-202ENST00000410080 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.64□□□□□ -0.55
PRPF40A-202ENST00000410080 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.64□□□□□ -0.55
PRPF40A-202ENST00000410080 NOP53Q9NZM5 478 aaKnown RBP11.64□□□□□ -0.55
PRPF40A-202ENST00000410080 PAIP2BQ9ULR5 123 aaKnown RBP11.64□□□□□ -0.55
PRPF40A-202ENST00000410080 M0QYT0 321 aa11.64□□□□□ -0.55
PRPF40A-202ENST00000410080 VPS26AO75436 327 aa11.64□□□□□ -0.55
PRPF40A-202ENST00000410080 UMPSP11172 480 aa11.64□□□□□ -0.55
PRPF40A-202ENST00000410080 GYS2P54840 703 aa11.64□□□□□ -0.55
PRPF40A-202ENST00000410080 ZNF200P98182 395 aaPredicted RBP11.64□□□□□ -0.55
PRPF40A-202ENST00000410080 EFEMP1Q12805 493 aa11.64□□□□□ -0.55
PRPF40A-202ENST00000410080 CACHD1Q5VU97 1274 aa11.64□□□□□ -0.55
PRPF40A-202ENST00000410080 GTF3C2Q8WUA4 911 aaPredicted RBP11.64□□□□□ -0.55
PRPF40A-202ENST00000410080 MRPL48Q96GC5 212 aaKnown RBP11.64□□□□□ -0.55
PRPF40A-202ENST00000410080 RRN3P2A6NIE6 340 aa11.64□□□□□ -0.55
PRPF40A-202ENST00000410080 UBE2Q2LH0YL09 131 aa11.64□□□□□ -0.55
PRPF40A-202ENST00000410080 STX7O15400 261 aaKnown RBP11.64□□□□□ -0.55
PRPF40A-202ENST00000410080 CTXN3Q4LDR2 81 aa11.64□□□□□ -0.55
PRPF40A-202ENST00000410080 BNIPLQ7Z465 357 aa11.64□□□□□ -0.55
PRPF40A-202ENST00000410080 CATSPER1Q8NEC5 780 aa11.64□□□□□ -0.55
PRPF40A-202ENST00000410080 FLCNQ8NFG4 579 aa11.64□□□□□ -0.55
PRPF40A-202ENST00000410080 TIPRLO75663 272 aa11.63□□□□□ -0.55
PRPF40A-202ENST00000410080 HSMCR30P0CW71 290 aa11.63□□□□□ -0.55
PRPF40A-202ENST00000410080 HOXA7P31268 230 aaPredicted RBP11.63□□□□□ -0.55
PRPF40A-202ENST00000410080 LAMC2Q13753 1193 aa11.63□□□□□ -0.55
PRPF40A-202ENST00000410080 POM121L1PQ3SYA9 428 aa11.63□□□□□ -0.55
PRPF40A-202ENST00000410080 C3orf62Q6ZUJ4 267 aa11.63□□□□□ -0.55
PRPF40A-202ENST00000410080 NEK10Q6ZWH5 1172 aa11.63□□□□□ -0.55
PRPF40A-202ENST00000410080 ITIH5Q86UX2 942 aa11.63□□□□□ -0.55
PRPF40A-202ENST00000410080 CNDP1Q96KN2 507 aa11.63□□□□□ -0.55
PRPF40A-202ENST00000410080 S100A13Q99584 98 aa11.63□□□□□ -0.55
PRPF40A-202ENST00000410080 FLT1P17948 1338 aa11.63□□□□□ -0.55
PRPF40A-202ENST00000410080 ZNF189O75820 626 aaPredicted RBP11.63□□□□□ -0.55
PRPF40A-202ENST00000410080 P3H2Q8IVL5 708 aa11.63□□□□□ -0.55
PRPF40A-202ENST00000410080 CCDC103Q8IW40 242 aa11.63□□□□□ -0.55
PRPF40A-202ENST00000410080 MOSPD2Q8NHP6 518 aa11.63□□□□□ -0.55
PRPF40A-202ENST00000410080 STAMBPL1Q96FJ0 436 aa11.63□□□□□ -0.55
PRPF40A-202ENST00000410080 KLHL25Q9H0H3 589 aa11.63□□□□□ -0.55
PRPF40A-202ENST00000410080 CHUKO15111 745 aa11.63□□□□□ -0.55
PRPF40A-202ENST00000410080 RPN2P04844 631 aa11.63□□□□□ -0.55
PRPF40A-202ENST00000410080 EPHX2P34913 555 aa11.63□□□□□ -0.55
PRPF40A-202ENST00000410080 TCF7P36402 384 aaPredicted RBP11.63□□□□□ -0.55
PRPF40A-202ENST00000410080 RAD23BP54727 409 aa11.63□□□□□ -0.55
PRPF40A-202ENST00000410080 SRSF11Q05519 484 aaKnown RBP11.63□□□□□ -0.55
PRPF40A-202ENST00000410080 SRBD1Q8N5C6 995 aaKnown RBP11.63□□□□□ -0.55
PRPF40A-202ENST00000410080 KLHL20Q9Y2M5 609 aa11.63□□□□□ -0.55
PRPF40A-202ENST00000410080 ACSF2Q96CM8 615 aaPredicted RBP11.63□□□□□ -0.55
PRPF40A-202ENST00000410080 BTBD9Q96Q07 612 aa11.63□□□□□ -0.55
PRPF40A-202ENST00000410080 GOLPH3Q9H4A6 298 aa11.63□□□□□ -0.55
PRPF40A-202ENST00000410080 MRPL42Q9Y6G3 142 aaKnown RBP11.63□□□□□ -0.55
PRPF40A-202ENST00000410080 CPSF1Q10570 1443 aaKnown RBP11.63□□□□□ -0.55
PRPF40A-202ENST00000410080 ERCC6L2Q5T890 1561 aa11.63□□□□□ -0.55
PRPF40A-202ENST00000410080 FOXN1O15353 648 aa11.63□□□□□ -0.55
PRPF40A-202ENST00000410080 NCF4Q15080 339 aa11.63□□□□□ -0.55
PRPF40A-202ENST00000410080 PDK1Q15118 436 aa11.63□□□□□ -0.55
PRPF40A-202ENST00000410080 TCEAL5Q5H9L2 206 aa11.63□□□□□ -0.55
PRPF40A-202ENST00000410080 USP7Q93009 1102 aa11.63□□□□□ -0.55
PRPF40A-202ENST00000410080 DDIT4Q9NX09 232 aa11.63□□□□□ -0.55
PRPF40A-202ENST00000410080 TNFSF13BQ9Y275 285 aa11.63□□□□□ -0.55
PRPF40A-202ENST00000410080 IQGAP3Q86VI3 1631 aa11.63□□□□□ -0.55
PRPF40A-202ENST00000410080 CBX4O00257 560 aa11.63□□□□□ -0.55
PRPF40A-202ENST00000410080 PPP2R2AP63151 447 aa11.63□□□□□ -0.55
PRPF40A-202ENST00000410080 AASDHQ4L235 1098 aaPredicted RBP11.63□□□□□ -0.55
PRPF40A-202ENST00000410080 PRPF39Q86UA1 669 aaKnown RBP11.63□□□□□ -0.55
PRPF40A-202ENST00000410080 SLC35G2Q8TBE7 412 aa11.63□□□□□ -0.55
PRPF40A-202ENST00000410080 LPAR1Q92633 364 aa11.63□□□□□ -0.55
PRPF40A-202ENST00000410080 USP6NLQ92738 828 aa11.63□□□□□ -0.55
PRPF40A-202ENST00000410080 ZKSCAN4Q969J2 545 aaPredicted RBP11.63□□□□□ -0.55
PRPF40A-202ENST00000410080 HDHD2Q9H0R4 259 aa11.63□□□□□ -0.55
PRPF40A-202ENST00000410080 DDX47Q9H0S4 455 aaKnown RBP11.63□□□□□ -0.55
PRPF40A-202ENST00000410080 ARMC7Q9H6L4 198 aa11.63□□□□□ -0.55
PRPF40A-202ENST00000410080 CYP39A1Q9NYL5 469 aa11.63□□□□□ -0.55
PRPF40A-202ENST00000410080 ZNF70Q9UC06 446 aaPredicted RBP11.63□□□□□ -0.55
PRPF40A-202ENST00000410080 CPA4Q9UI42 421 aa11.63□□□□□ -0.55
PRPF40A-202ENST00000410080 ANAPC2Q9UJX6 822 aa11.63□□□□□ -0.55
PRPF40A-202ENST00000410080 SNX6Q9UNH7 406 aa11.63□□□□□ -0.55
PRPF40A-202ENST00000410080 TSPAN3O60637 253 aa11.63□□□□□ -0.55
PRPF40A-202ENST00000410080 PSMC3P17980 439 aa11.63□□□□□ -0.55
PRPF40A-202ENST00000410080 UGP2Q16851 508 aa11.63□□□□□ -0.55
PRPF40A-202ENST00000410080 DDI2Q5TDH0 399 aa11.63□□□□□ -0.55
PRPF40A-202ENST00000410080 ZCCHC8Q6NZY4 707 aaKnown RBP11.63□□□□□ -0.55
PRPF40A-202ENST00000410080 EIF3LQ9Y262 564 aaKnown RBP11.63□□□□□ -0.55
PRPF40A-202ENST00000410080 AP3D1O14617 1153 aa11.62□□□□□ -0.55
PRPF40A-202ENST00000410080 MAP3K6O95382 1288 aa11.62□□□□□ -0.55
PRPF40A-202ENST00000410080 EPHB2P29323 1055 aa11.62□□□□□ -0.55
PRPF40A-202ENST00000410080 SOX6P35712 828 aa11.62□□□□□ -0.55
PRPF40A-202ENST00000410080 DYNC1I2Q13409 638 aaKnown RBP11.62□□□□□ -0.55
PRPF40A-202ENST00000410080 CEP68Q76N32 757 aa11.62□□□□□ -0.55
PRPF40A-202ENST00000410080 NT5DC3Q86UY8 548 aa11.62□□□□□ -0.55
PRPF40A-202ENST00000410080 CYP4Z1Q86W10 505 aa11.62□□□□□ -0.55
PRPF40A-202ENST00000410080 TPD52L3Q96J77 140 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms