RNA–Protein interactions for RNA: ENST00000409747.5

CBX3-203, Transcript of chromobox 3, humanhuman

TSL 1 (best) BASIC

Gene CBX3, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-203ENST00000409747 ARHGAP26Q9UNA1 814 aa15.72■□□□□ 0.11
CBX3-203ENST00000409747 HELZP42694 1942 aaKnown RBP15.72■□□□□ 0.11
CBX3-203ENST00000409747 ATP8B3O60423 1300 aa15.72■□□□□ 0.11
CBX3-203ENST00000409747 ANAPC1Q9H1A4 1944 aa15.71■□□□□ 0.11
CBX3-203ENST00000409747 C2orf78A6NCI8 922 aa15.71■□□□□ 0.11
CBX3-203ENST00000409747 A8MXQ7 604 aa15.71■□□□□ 0.11
CBX3-203ENST00000409747 LRP3O75074 770 aa15.71■□□□□ 0.11
CBX3-203ENST00000409747 KIF20AO95235 890 aa15.71■□□□□ 0.11
CBX3-203ENST00000409747 RETP07949 1114 aa15.71■□□□□ 0.11
CBX3-203ENST00000409747 PTPN1P18031 435 aaKnown RBP15.71■□□□□ 0.11
CBX3-203ENST00000409747 CMA1P23946 247 aa15.71■□□□□ 0.11
CBX3-203ENST00000409747 MYL6P60660 151 aa15.71■□□□□ 0.11
CBX3-203ENST00000409747 KRT85P78386 507 aa15.71■□□□□ 0.11
CBX3-203ENST00000409747 ZNF699Q32M78 642 aa15.71■□□□□ 0.11
CBX3-203ENST00000409747 FBXO43Q4G163 708 aa15.71■□□□□ 0.11
CBX3-203ENST00000409747 FSTL4Q6MZW2 842 aa15.71■□□□□ 0.11
CBX3-203ENST00000409747 SLC9A9Q8IVB4 645 aa15.71■□□□□ 0.11
CBX3-203ENST00000409747 ARL14EPQ8N8R7 260 aaPredicted RBP15.71■□□□□ 0.11
CBX3-203ENST00000409747 SPRYD3Q8NCJ5 442 aa15.71■□□□□ 0.11
CBX3-203ENST00000409747 B3GALNT2Q8NCR0 500 aa15.71■□□□□ 0.11
CBX3-203ENST00000409747 TTC16Q8NEE8 873 aa15.71■□□□□ 0.11
CBX3-203ENST00000409747 ZNF516Q92618 1163 aa15.71■□□□□ 0.11
CBX3-203ENST00000409747 PAGE5Q96GU1 130 aa15.71■□□□□ 0.11
CBX3-203ENST00000409747 SLC22A12Q96S37 553 aa15.71■□□□□ 0.11
CBX3-203ENST00000409747 CYP2S1Q96SQ9 504 aa15.71■□□□□ 0.11
CBX3-203ENST00000409747 P2RY13Q9BPV8 354 aa15.71■□□□□ 0.11
CBX3-203ENST00000409747 XYLT2Q9H1B5 865 aa15.71■□□□□ 0.11
CBX3-203ENST00000409747 DLL3Q9NYJ7 618 aa15.71■□□□□ 0.11
CBX3-203ENST00000409747 NXF1Q9UBU9 619 aaKnown RBP15.71■□□□□ 0.11
CBX3-203ENST00000409747 USP18Q9UMW8 372 aa15.71■□□□□ 0.11
CBX3-203ENST00000409747 GPR179Q6PRD1 2367 aa15.71■□□□□ 0.11
CBX3-203ENST00000409747 OTOL1A6NHN0 477 aaPredicted RBP15.71■□□□□ 0.1
CBX3-203ENST00000409747 F8VP50 259 aa15.71■□□□□ 0.1
CBX3-203ENST00000409747 KLRC4O43908 158 aa15.71■□□□□ 0.1
CBX3-203ENST00000409747 PFKFB1P16118 471 aa15.71■□□□□ 0.1
CBX3-203ENST00000409747 GJA4P35212 333 aa15.71■□□□□ 0.1
CBX3-203ENST00000409747 CLDN10P78369 228 aa15.71■□□□□ 0.1
CBX3-203ENST00000409747 DNAH14Q0VDD8 3507 aa15.71■□□□□ 0.1
CBX3-203ENST00000409747 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.71■□□□□ 0.1
CBX3-203ENST00000409747 WDR5BQ86VZ2 330 aa15.71■□□□□ 0.1
CBX3-203ENST00000409747 KIAA1958Q8N8K9 716 aa15.71■□□□□ 0.1
CBX3-203ENST00000409747 KIAA0895Q8NCT3 520 aa15.71■□□□□ 0.1
CBX3-203ENST00000409747 CCDC26Q8TAB7 109 aa15.71■□□□□ 0.1
CBX3-203ENST00000409747 SH3RF2Q8TEC5 729 aa15.71■□□□□ 0.1
CBX3-203ENST00000409747 PARD3BQ8TEW8 1205 aa15.71■□□□□ 0.1
CBX3-203ENST00000409747 CCDC47Q96A33 483 aaKnown RBP15.71■□□□□ 0.1
CBX3-203ENST00000409747 TNIP3Q96KP6 325 aa15.71■□□□□ 0.1
CBX3-203ENST00000409747 SPATA32Q96LK8 384 aa15.71■□□□□ 0.1
CBX3-203ENST00000409747 SLITRK1Q96PX8 696 aa15.71■□□□□ 0.1
CBX3-203ENST00000409747 GZF1Q9H116 711 aaPredicted RBP15.71■□□□□ 0.1
CBX3-203ENST00000409747 SLC8A2Q9UPR5 921 aa15.71■□□□□ 0.1
CBX3-203ENST00000409747 CACNA1AO00555 2505 aa15.71■□□□□ 0.1
CBX3-203ENST00000409747 CCDC163A0A0D9SF12 145 aa15.7■□□□□ 0.1
CBX3-203ENST00000409747 PDXKO00764 312 aa15.7■□□□□ 0.1
CBX3-203ENST00000409747 NFATC1O95644 943 aa15.7■□□□□ 0.1
CBX3-203ENST00000409747 P4HA1P13674 534 aa15.7■□□□□ 0.1
CBX3-203ENST00000409747 STK4Q13043 487 aa15.7■□□□□ 0.1
CBX3-203ENST00000409747 NCOA4Q13772 614 aa15.7■□□□□ 0.1
CBX3-203ENST00000409747 EML3Q32P44 896 aa15.7■□□□□ 0.1
CBX3-203ENST00000409747 KMT5BQ4FZB7 885 aa15.7■□□□□ 0.1
CBX3-203ENST00000409747 ZNF667Q5HYK9 610 aa15.7■□□□□ 0.1
CBX3-203ENST00000409747 TDRD10Q5VZ19 366 aaKnown RBP15.7■□□□□ 0.1
CBX3-203ENST00000409747 HEATR6Q6AI08 1181 aaKnown RBP15.7■□□□□ 0.1
CBX3-203ENST00000409747 CHFRQ96EP1 664 aa15.7■□□□□ 0.1
CBX3-203ENST00000409747 WNT6Q9Y6F9 365 aa15.7■□□□□ 0.1
CBX3-203ENST00000409747 A0A1B0GVL5 298 aa15.69■□□□□ 0.1
CBX3-203ENST00000409747 LRRIQ3A6PVS8 624 aaPredicted RBP15.69■□□□□ 0.1
CBX3-203ENST00000409747 CASP4P49662 377 aa15.69■□□□□ 0.1
CBX3-203ENST00000409747 USP46P62068 366 aa15.69■□□□□ 0.1
CBX3-203ENST00000409747 DMWDQ09019 674 aa15.69■□□□□ 0.1
CBX3-203ENST00000409747 LPAL2Q16609 132 aa15.69■□□□□ 0.1
CBX3-203ENST00000409747 RSPO4Q2I0M5 234 aaPredicted RBP15.69■□□□□ 0.1
CBX3-203ENST00000409747 CEP68Q76N32 757 aa15.69■□□□□ 0.1
CBX3-203ENST00000409747 PDZD8Q8NEN9 1154 aa15.69■□□□□ 0.1
CBX3-203ENST00000409747 CD101Q93033 1021 aa15.69■□□□□ 0.1
CBX3-203ENST00000409747 ZNF518BQ9C0D4 1074 aa15.69■□□□□ 0.1
CBX3-203ENST00000409747 DPEP3Q9H4B8 488 aa15.69■□□□□ 0.1
CBX3-203ENST00000409747 DMAC2Q9NW81 257 aa15.69■□□□□ 0.1
CBX3-203ENST00000409747 CDV3Q9UKY7 258 aaKnown RBP15.69■□□□□ 0.1
CBX3-203ENST00000409747 HPSEQ9Y251 543 aa15.69■□□□□ 0.1
CBX3-203ENST00000409747 NME7Q9Y5B8 376 aa15.69■□□□□ 0.1
CBX3-203ENST00000409747 ATP6V1DQ9Y5K8 247 aa15.69■□□□□ 0.1
CBX3-203ENST00000409747 ZNF840PA6NDX5 716 aa15.68■□□□□ 0.1
CBX3-203ENST00000409747 HRO43593 1189 aa15.68■□□□□ 0.1
CBX3-203ENST00000409747 CALUO43852 315 aaPredicted RBP15.68■□□□□ 0.1
CBX3-203ENST00000409747 FOXD2O60548 495 aaPredicted RBP15.68■□□□□ 0.1
CBX3-203ENST00000409747 RNF40O75150 1001 aa15.68■□□□□ 0.1
CBX3-203ENST00000409747 RTN3O95197 1032 aaPredicted RBP15.68■□□□□ 0.1
CBX3-203ENST00000409747 EGFP01133 1207 aa15.68■□□□□ 0.1
CBX3-203ENST00000409747 NR3C1P04150 777 aa15.68■□□□□ 0.1
CBX3-203ENST00000409747 TRIM21P19474 475 aaKnown RBP15.68■□□□□ 0.1
CBX3-203ENST00000409747 GALK1P51570 392 aa15.68■□□□□ 0.1
CBX3-203ENST00000409747 SLC7A9P82251 487 aa15.68■□□□□ 0.1
CBX3-203ENST00000409747 DDX42Q86XP3 938 aaKnown RBP eCLIP15.68■□□□□ 0.1
CBX3-203ENST00000409747 NUP93Q8N1F7 819 aa15.68■□□□□ 0.1
CBX3-203ENST00000409747 PLEKHO2Q8TD55 490 aa15.68■□□□□ 0.1
CBX3-203ENST00000409747 KCTD10Q9H3F6 313 aa15.68■□□□□ 0.1
CBX3-203ENST00000409747 C2orf42Q9NWW7 574 aa15.68■□□□□ 0.1
CBX3-203ENST00000409747 FRMD4BQ9Y2L6 1034 aa15.68■□□□□ 0.1
CBX3-203ENST00000409747 SLC9A3R1O14745 358 aaPredicted RBP15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms