RNA–Protein interactions for RNA: ENST00000409672.5

SCN9A-203, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS P2 TSL 5 BASIC

Gene SCN9A, Length 9,768 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-203ENST00000409672 OR10G6Q8NH81 332 aa8.72□□□□□ -1.01
SCN9A-203ENST00000409672 SKA1Q96BD8 255 aa8.72□□□□□ -1.01
SCN9A-203ENST00000409672 CELF6Q96J87 481 aaKnown RBP8.72□□□□□ -1.01
SCN9A-203ENST00000409672 EVPLLA8MZ36 301 aa8.72□□□□□ -1.01
SCN9A-203ENST00000409672 DSG4Q86SJ6 1040 aa8.72□□□□□ -1.01
SCN9A-203ENST00000409672 RIN2Q8WYP3 895 aaPredicted RBP8.72□□□□□ -1.01
SCN9A-203ENST00000409672 GPR108Q9NPR9 543 aa8.72□□□□□ -1.01
SCN9A-203ENST00000409672 MTMR4Q9NYA4 1195 aa8.72□□□□□ -1.01
SCN9A-203ENST00000409672 CHD1O14646 1710 aa8.72□□□□□ -1.01
SCN9A-203ENST00000409672 CYP2C19P33261 490 aa8.72□□□□□ -1.01
SCN9A-203ENST00000409672 MACC1Q6ZN28 852 aa8.72□□□□□ -1.01
SCN9A-203ENST00000409672 ZNF669Q96BR6 464 aaPredicted RBP8.72□□□□□ -1.01
SCN9A-203ENST00000409672 TSPAN17Q96FV3 270 aa8.72□□□□□ -1.01
SCN9A-203ENST00000409672 CGRRF1Q99675 332 aa8.72□□□□□ -1.01
SCN9A-203ENST00000409672 RHOBTB2Q9BYZ6 727 aa8.72□□□□□ -1.01
SCN9A-203ENST00000409672 GOLPH3Q9H4A6 298 aa8.72□□□□□ -1.01
SCN9A-203ENST00000409672 ELL3Q9HB65 397 aaPredicted RBP8.72□□□□□ -1.01
SCN9A-203ENST00000409672 GPN3Q9UHW5 284 aaPredicted RBP8.72□□□□□ -1.01
SCN9A-203ENST00000409672 FAM205CA6NFA0 338 aa8.72□□□□□ -1.01
SCN9A-203ENST00000409672 HSMCR30P0CW71 290 aa8.72□□□□□ -1.01
SCN9A-203ENST00000409672 GARTP22102 1010 aa8.72□□□□□ -1.01
SCN9A-203ENST00000409672 THOP1P52888 689 aa8.72□□□□□ -1.01
SCN9A-203ENST00000409672 EPHA7Q15375 998 aa8.72□□□□□ -1.01
SCN9A-203ENST00000409672 CYP20A1Q6UW02 462 aa8.72□□□□□ -1.01
SCN9A-203ENST00000409672 PRR23BQ6ZRT6 265 aa8.72□□□□□ -1.01
SCN9A-203ENST00000409672 ARHGEF26Q96DR7 871 aa8.72□□□□□ -1.01
SCN9A-203ENST00000409672 JSRP1Q96MG2 331 aaPredicted RBP8.72□□□□□ -1.01
SCN9A-203ENST00000409672 ADI1Q9BV57 179 aa8.72□□□□□ -1.01
SCN9A-203ENST00000409672 NDRG2Q9UN36 371 aaKnown RBP8.72□□□□□ -1.01
SCN9A-203ENST00000409672 PTPRTO14522 1441 aa8.72□□□□□ -1.01
SCN9A-203ENST00000409672 ADAMTS12P58397 1594 aa8.71□□□□□ -1.01
SCN9A-203ENST00000409672 ARL6IP4Q66PJ3 421 aaKnown RBP8.71□□□□□ -1.01
SCN9A-203ENST00000409672 FAAH2Q6GMR7 532 aa8.71□□□□□ -1.01
SCN9A-203ENST00000409672 LPAR1Q92633 364 aa8.71□□□□□ -1.01
SCN9A-203ENST00000409672 CNOT10Q9H9A5 744 aaKnown RBP8.71□□□□□ -1.01
SCN9A-203ENST00000409672 SPG21Q9NZD8 308 aa8.71□□□□□ -1.01
SCN9A-203ENST00000409672 ZMYM5Q9UJ78 669 aa8.71□□□□□ -1.01
SCN9A-203ENST00000409672 IQSEC2Q5JU85 1478 aa8.71□□□□□ -1.01
SCN9A-203ENST00000409672 HAUS5O94927 633 aa8.71□□□□□ -1.01
SCN9A-203ENST00000409672 PRKAG1P54619 331 aa8.71□□□□□ -1.01
SCN9A-203ENST00000409672 RESTQ13127 1097 aa8.71□□□□□ -1.01
SCN9A-203ENST00000409672 CASP8Q14790 479 aa8.71□□□□□ -1.01
SCN9A-203ENST00000409672 POMZP3Q6PJE2 187 aa8.71□□□□□ -1.01
SCN9A-203ENST00000409672 CNBD2Q96M20 576 aa8.71□□□□□ -1.01
SCN9A-203ENST00000409672 STK33Q9BYT3 514 aa8.71□□□□□ -1.01
SCN9A-203ENST00000409672 GULP1Q9UBP9 304 aa8.71□□□□□ -1.01
SCN9A-203ENST00000409672 ATP7BP35670 1465 aa8.71□□□□□ -1.01
SCN9A-203ENST00000409672 LRRIQ3A6PVS8 624 aaPredicted RBP8.71□□□□□ -1.01
SCN9A-203ENST00000409672 NFIBO00712 420 aa8.71□□□□□ -1.01
SCN9A-203ENST00000409672 MFAP3LO75121 409 aa8.71□□□□□ -1.01
SCN9A-203ENST00000409672 SERPINB5P36952 375 aa8.71□□□□□ -1.01
SCN9A-203ENST00000409672 CPA2P48052 419 aa8.71□□□□□ -1.01
SCN9A-203ENST00000409672 OXCT1P55809 520 aa8.71□□□□□ -1.01
SCN9A-203ENST00000409672 LRRC74BQ6ZQY2 392 aa8.71□□□□□ -1.01
SCN9A-203ENST00000409672 GPR152Q8TDT2 470 aa8.71□□□□□ -1.01
SCN9A-203ENST00000409672 ACOX2Q99424 681 aa8.71□□□□□ -1.01
SCN9A-203ENST00000409672 TRIM51Q9BSJ1 452 aa8.71□□□□□ -1.01
SCN9A-203ENST00000409672 CAAP1Q9H8G2 361 aa8.71□□□□□ -1.01
SCN9A-203ENST00000409672 KCNH7Q9NS40 1196 aa8.71□□□□□ -1.01
SCN9A-203ENST00000409672 IMPAD1Q9NX62 359 aa8.71□□□□□ -1.01
SCN9A-203ENST00000409672 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.71□□□□□ -1.011e-7■■■■□ 20
SCN9A-203ENST00000409672 ZNF711Q9Y462 761 aa8.71□□□□□ -1.01
SCN9A-203ENST00000409672 KIF1CO43896 1103 aaKnown RBP8.71□□□□□ -1.02
SCN9A-203ENST00000409672 KLRK1P26718 216 aa8.71□□□□□ -1.02
SCN9A-203ENST00000409672 ARF5P84085 180 aa8.71□□□□□ -1.02
SCN9A-203ENST00000409672 SLC15A2Q16348 729 aa8.71□□□□□ -1.02
SCN9A-203ENST00000409672 JAMLQ86YT9 394 aa8.71□□□□□ -1.02
SCN9A-203ENST00000409672 TRAPPC5Q8IUR0 188 aa8.71□□□□□ -1.02
SCN9A-203ENST00000409672 PCSK9Q8NBP7 692 aaKnown RBP8.71□□□□□ -1.02
SCN9A-203ENST00000409672 ACER1Q8TDN7 264 aa8.71□□□□□ -1.02
SCN9A-203ENST00000409672 SNX6Q9UNH7 406 aa8.71□□□□□ -1.02
SCN9A-203ENST00000409672 SIK3Q9Y2K2 1263 aa8.71□□□□□ -1.02
SCN9A-203ENST00000409672 DGAT1O75907 488 aa8.71□□□□□ -1.02
SCN9A-203ENST00000409672 HNF4AP41235 474 aa8.71□□□□□ -1.02
SCN9A-203ENST00000409672 SH3BP5LQ7L8J4 393 aa8.71□□□□□ -1.02
SCN9A-203ENST00000409672 COLGALT2Q8IYK4 626 aa8.71□□□□□ -1.02
SCN9A-203ENST00000409672 C2orf73Q8N5S3 287 aaPredicted RBP8.71□□□□□ -1.02
SCN9A-203ENST00000409672 VCPKMTQ9H867 229 aa8.71□□□□□ -1.02
SCN9A-203ENST00000409672 PLA2G6O60733 806 aa8.71□□□□□ -1.02
SCN9A-203ENST00000409672 SUPT7LO94864 414 aa8.71□□□□□ -1.02
SCN9A-203ENST00000409672 EYA4O95677 639 aa8.71□□□□□ -1.02
SCN9A-203ENST00000409672 ZNF682O95780 498 aa8.71□□□□□ -1.02
SCN9A-203ENST00000409672 MYBL1P10243 752 aa8.71□□□□□ -1.02
SCN9A-203ENST00000409672 IL1R1P14778 569 aa8.71□□□□□ -1.02
SCN9A-203ENST00000409672 SEC13P55735 322 aa8.71□□□□□ -1.02
SCN9A-203ENST00000409672 AMPD2Q01433 879 aa8.71□□□□□ -1.02
SCN9A-203ENST00000409672 TRIM72Q6ZMU5 477 aa8.71□□□□□ -1.02
SCN9A-203ENST00000409672 COL23A1Q86Y22 540 aaPredicted RBP8.71□□□□□ -1.02
SCN9A-203ENST00000409672 C9orf72Q96LT7 481 aa8.71□□□□□ -1.02
SCN9A-203ENST00000409672 DDX43Q9NXZ2 648 aaKnown RBP8.71□□□□□ -1.02
SCN9A-203ENST00000409672 CCNT2O60583 730 aaKnown RBP8.71□□□□□ -1.02
SCN9A-203ENST00000409672 TIPRLO75663 272 aa8.71□□□□□ -1.02
SCN9A-203ENST00000409672 WASP42768 502 aa8.71□□□□□ -1.02
SCN9A-203ENST00000409672 CDC42EP1Q00587 391 aa8.71□□□□□ -1.02
SCN9A-203ENST00000409672 PLA2G4EQ3MJ16 856 aa8.71□□□□□ -1.02
SCN9A-203ENST00000409672 CBWD3Q5JTY5 395 aa8.71□□□□□ -1.02
SCN9A-203ENST00000409672 RABGAP1LQ5R372 815 aa8.71□□□□□ -1.02
SCN9A-203ENST00000409672 CBWD5Q5RIA9 395 aa8.71□□□□□ -1.02
SCN9A-203ENST00000409672 TRAPPC12Q8WVT3 735 aa8.71□□□□□ -1.02
SCN9A-203ENST00000409672 YY1AP1Q9H869 796 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms