RNA–Protein interactions for RNA: ENST00000409604.1

SNX13-202, Transcript of sorting nexin 13, humanhuman

TSL 1 (best) BASIC

Gene SNX13, Length 4,146 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-202ENST00000409604 PMPCBO75439 489 aa11.92□□□□□ -0.5
SNX13-202ENST00000409604 RTP1P59025 263 aa11.92□□□□□ -0.5
SNX13-202ENST00000409604 ZKSCAN8Q15776 578 aaPredicted RBP11.92□□□□□ -0.5
SNX13-202ENST00000409604 C9orf57Q5W0N0 161 aa11.92□□□□□ -0.5
SNX13-202ENST00000409604 YAF2Q8IY57 180 aa11.92□□□□□ -0.5
SNX13-202ENST00000409604 PDIK1LQ8N165 341 aa11.92□□□□□ -0.5
SNX13-202ENST00000409604 PGBD3Q8N328 593 aa11.92□□□□□ -0.5
SNX13-202ENST00000409604 FIBCD1Q8N539 461 aa11.92□□□□□ -0.5
SNX13-202ENST00000409604 B3GALNT2Q8NCR0 500 aa11.92□□□□□ -0.5
SNX13-202ENST00000409604 LNX1Q8TBB1 728 aaPredicted RBP11.92□□□□□ -0.5
SNX13-202ENST00000409604 BAP1Q92560 729 aa11.92□□□□□ -0.5
SNX13-202ENST00000409604 ALKBH8Q96BT7 664 aaKnown RBP11.92□□□□□ -0.5
SNX13-202ENST00000409604 DDX27Q96GQ7 796 aaKnown RBP11.92□□□□□ -0.5
SNX13-202ENST00000409604 CORO1BQ9BR76 489 aa11.92□□□□□ -0.5
SNX13-202ENST00000409604 HPCAL4Q9UM19 191 aa11.92□□□□□ -0.5
SNX13-202ENST00000409604 MYBPHLA2RUH7 354 aa11.92□□□□□ -0.5
SNX13-202ENST00000409604 KCNK1O00180 336 aa11.92□□□□□ -0.5
SNX13-202ENST00000409604 B4GALT4O60513 344 aa11.92□□□□□ -0.5
SNX13-202ENST00000409604 ASS1P00966 412 aaKnown RBP11.92□□□□□ -0.5
SNX13-202ENST00000409604 GRM5P41594 1212 aa11.92□□□□□ -0.5
SNX13-202ENST00000409604 GCNT1Q02742 428 aa11.92□□□□□ -0.5
SNX13-202ENST00000409604 PRPSAP1Q14558 356 aa11.92□□□□□ -0.5
SNX13-202ENST00000409604 TSHZ1Q6ZSZ6 1077 aa11.92□□□□□ -0.5
SNX13-202ENST00000409604 RNF135Q8IUD6 432 aa11.92□□□□□ -0.5
SNX13-202ENST00000409604 DDI1Q8WTU0 396 aa11.92□□□□□ -0.5
SNX13-202ENST00000409604 DEPDC1BQ8WUY9 529 aa11.92□□□□□ -0.5
SNX13-202ENST00000409604 GANQ9H2C0 597 aa11.92□□□□□ -0.5
SNX13-202ENST00000409604 ZCCHC17Q9NP64 241 aaKnown RBP11.92□□□□□ -0.5
SNX13-202ENST00000409604 APOL1O14791 398 aa11.92□□□□□ -0.5
SNX13-202ENST00000409604 HOXA2O43364 376 aa11.92□□□□□ -0.5
SNX13-202ENST00000409604 AXLP30530 894 aa11.92□□□□□ -0.5
SNX13-202ENST00000409604 AVPR1AP37288 418 aa11.92□□□□□ -0.5
SNX13-202ENST00000409604 VSNL1P62760 191 aa11.92□□□□□ -0.5
SNX13-202ENST00000409604 TWF1Q12792 350 aa11.92□□□□□ -0.5
SNX13-202ENST00000409604 CLEC16AQ2KHT3 1053 aa11.92□□□□□ -0.5
SNX13-202ENST00000409604 ZCWPW2Q504Y3 356 aa11.92□□□□□ -0.5
SNX13-202ENST00000409604 ZNF558Q96NG5 402 aa11.92□□□□□ -0.5
SNX13-202ENST00000409604 CIPCQ9C0C6 399 aa11.92□□□□□ -0.5
SNX13-202ENST00000409604 WNT8AQ9H1J5 351 aa11.92□□□□□ -0.5
SNX13-202ENST00000409604 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.92□□□□□ -0.5
SNX13-202ENST00000409604 SFMBT1Q9UHJ3 866 aa11.92□□□□□ -0.5
SNX13-202ENST00000409604 PCDHB5Q9Y5E4 795 aa11.92□□□□□ -0.5
SNX13-202ENST00000409604 ANKRD36CQ5JPF3 1778 aa11.92□□□□□ -0.5
SNX13-202ENST00000409604 DDX60Q8IY21 1712 aaKnown RBP11.92□□□□□ -0.5
SNX13-202ENST00000409604 GRID2IPA4D2P6 1211 aa11.92□□□□□ -0.5
SNX13-202ENST00000409604 H3BRJ5 948 aa11.92□□□□□ -0.5
SNX13-202ENST00000409604 CFHP08603 1231 aa11.92□□□□□ -0.5
SNX13-202ENST00000409604 ROR1Q01973 937 aa11.92□□□□□ -0.5
SNX13-202ENST00000409604 BST2Q10589 180 aaKnown RBP11.92□□□□□ -0.5
SNX13-202ENST00000409604 MYBPC2Q14324 1141 aa11.92□□□□□ -0.5
SNX13-202ENST00000409604 EFHC1Q5JVL4 640 aa11.92□□□□□ -0.5
SNX13-202ENST00000409604 HHATQ5VTY9 493 aa11.92□□□□□ -0.5
SNX13-202ENST00000409604 C16orf59Q7L2K0 433 aa11.92□□□□□ -0.5
SNX13-202ENST00000409604 ZBED8Q8IZ13 594 aa11.92□□□□□ -0.5
SNX13-202ENST00000409604 DIS3LQ8TF46 1054 aaKnown RBP11.92□□□□□ -0.5
SNX13-202ENST00000409604 PAAF1Q9BRP4 392 aa11.92□□□□□ -0.5
SNX13-202ENST00000409604 TMEM121Q9BTD3 319 aa11.92□□□□□ -0.5
SNX13-202ENST00000409604 SLC28A3Q9HAS3 691 aa11.92□□□□□ -0.5
SNX13-202ENST00000409604 COL4A5P29400 1685 aa11.91□□□□□ -0.5
SNX13-202ENST00000409604 SMCHD1A6NHR9 2005 aa11.91□□□□□ -0.5
SNX13-202ENST00000409604 CITO14578 2027 aa11.91□□□□□ -0.5
SNX13-202ENST00000409604 MYH6P13533 1939 aa11.91□□□□□ -0.5
SNX13-202ENST00000409604 A8MX80 341 aa11.91□□□□□ -0.5
SNX13-202ENST00000409604 FGBP02675 491 aa11.91□□□□□ -0.5
SNX13-202ENST00000409604 CKBP12277 381 aa11.91□□□□□ -0.5
SNX13-202ENST00000409604 HARS2P49590 506 aaKnown RBP11.91□□□□□ -0.5
SNX13-202ENST00000409604 ZNF235Q14590 738 aa11.91□□□□□ -0.5
SNX13-202ENST00000409604 SLMAPQ14BN4 828 aa11.91□□□□□ -0.5
SNX13-202ENST00000409604 MRPS31Q92665 395 aaKnown RBP11.91□□□□□ -0.5
SNX13-202ENST00000409604 MYLPFQ96A32 169 aa11.91□□□□□ -0.5
SNX13-202ENST00000409604 PCDHB18PQ96TA0 734 aa11.91□□□□□ -0.5
SNX13-202ENST00000409604 NCAPGQ9BPX3 1015 aa11.91□□□□□ -0.5
SNX13-202ENST00000409604 SHANK3Q9BYB0 1731 aa11.91□□□□□ -0.5
SNX13-202ENST00000409604 A0A1B0GUA9 196 aa11.91□□□□□ -0.5
SNX13-202ENST00000409604 CXCL14O95715 111 aa11.91□□□□□ -0.5
SNX13-202ENST00000409604 INHBAP08476 426 aa11.91□□□□□ -0.5
SNX13-202ENST00000409604 MYBL1P10243 752 aa11.91□□□□□ -0.5
SNX13-202ENST00000409604 AFF1P51825 1210 aaKnown RBP11.91□□□□□ -0.5
SNX13-202ENST00000409604 LILRA4P59901 499 aa11.91□□□□□ -0.5
SNX13-202ENST00000409604 MCL1Q07820 350 aa11.91□□□□□ -0.5
SNX13-202ENST00000409604 TUSC3Q13454 348 aa11.91□□□□□ -0.5
SNX13-202ENST00000409604 NFE2Q16621 373 aaPredicted RBP11.91□□□□□ -0.5
SNX13-202ENST00000409604 OR2W6PQ8NHA6 318 aa11.91□□□□□ -0.5
SNX13-202ENST00000409604 PPP2R3CQ969Q6 453 aa11.91□□□□□ -0.5
SNX13-202ENST00000409604 CCDC68Q9H2F9 335 aa11.91□□□□□ -0.5
SNX13-202ENST00000409604 FZD8Q9H461 694 aa11.91□□□□□ -0.5
SNX13-202ENST00000409604 AIPL1Q9NZN9 384 aa11.91□□□□□ -0.5
SNX13-202ENST00000409604 TRPM5Q9NZQ8 1165 aa11.91□□□□□ -0.5
SNX13-202ENST00000409604 WDR35Q9P2L0 1181 aa11.91□□□□□ -0.5
SNX13-202ENST00000409604 SLC45A1Q9Y2W3 748 aa11.91□□□□□ -0.5
SNX13-202ENST00000409604 GOLGA8RI6L899 631 aa11.91□□□□□ -0.5
SNX13-202ENST00000409604 NDUFV1P49821 464 aa11.91□□□□□ -0.5
SNX13-202ENST00000409604 YWHAZP63104 245 aaKnown RBP11.91□□□□□ -0.5
SNX13-202ENST00000409604 PDIA2Q13087 525 aaKnown RBP11.91□□□□□ -0.5
SNX13-202ENST00000409604 PIGHQ14442 188 aaPredicted RBP11.91□□□□□ -0.5
SNX13-202ENST00000409604 STILQ15468 1287 aa11.91□□□□□ -0.5
SNX13-202ENST00000409604 TCEA2Q15560 299 aa11.91□□□□□ -0.5
SNX13-202ENST00000409604 IZUMO3Q5VZ72 239 aa11.91□□□□□ -0.5
SNX13-202ENST00000409604 CPNE8Q86YQ8 564 aa11.91□□□□□ -0.5
SNX13-202ENST00000409604 VPS52Q8N1B4 723 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms