RNA–Protein interactions for RNA: ENST00000409417.5

PDLIM2-207, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM2, Length 1,487 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-207ENST00000409417 PPP1R26Q5T8A7 1209 aaPredicted RBP21.03■□□□□ 0.96
PDLIM2-207ENST00000409417 ARHGAP17Q68EM7 881 aa21.03■□□□□ 0.96
PDLIM2-207ENST00000409417 ZSWIM3Q96MP5 696 aa21.03■□□□□ 0.96
PDLIM2-207ENST00000409417 TTLL2Q9BWV7 592 aa21.03■□□□□ 0.96
PDLIM2-207ENST00000409417 VPS16Q9H269 839 aa21.03■□□□□ 0.96
PDLIM2-207ENST00000409417 SLITRK6Q9H5Y7 841 aa21.03■□□□□ 0.96
PDLIM2-207ENST00000409417 LIMA1Q9UHB6 759 aaKnown RBP21.03■□□□□ 0.96
PDLIM2-207ENST00000409417 SORCS3Q9UPU3 1222 aa21.03■□□□□ 0.96
PDLIM2-207ENST00000409417 CNTN6Q9UQ52 1028 aa21.03■□□□□ 0.96
PDLIM2-207ENST00000409417 PI4K2BG5E9Z4 385 aa21.02■□□□□ 0.96
PDLIM2-207ENST00000409417 BEST1O76090 585 aa21.02■□□□□ 0.96
PDLIM2-207ENST00000409417 CAVIN2O95810 425 aa21.02■□□□□ 0.96
PDLIM2-207ENST00000409417 MFAP3P55082 362 aa21.02■□□□□ 0.96
PDLIM2-207ENST00000409417 USP46P62068 366 aa21.02■□□□□ 0.96
PDLIM2-207ENST00000409417 APBA1Q02410 837 aa21.02■□□□□ 0.96
PDLIM2-207ENST00000409417 FAM78AQ5JUQ0 283 aa21.02■□□□□ 0.96
PDLIM2-207ENST00000409417 PARM1Q6UWI2 310 aa21.02■□□□□ 0.96
PDLIM2-207ENST00000409417 NUP93Q8N1F7 819 aa21.02■□□□□ 0.96
PDLIM2-207ENST00000409417 ZMIZ2Q8NF64 920 aa21.02■□□□□ 0.96
PDLIM2-207ENST00000409417 DUSP16Q9BY84 665 aa21.02■□□□□ 0.96
PDLIM2-207ENST00000409417 SIX2Q9NPC8 291 aa21.02■□□□□ 0.96
PDLIM2-207ENST00000409417 ZMYM5Q9UJ78 669 aa21.02■□□□□ 0.96
PDLIM2-207ENST00000409417 NUMBLQ9Y6R0 609 aa21.02■□□□□ 0.96
PDLIM2-207ENST00000409417 TNFRSF10BO14763 440 aa21.01■□□□□ 0.95
PDLIM2-207ENST00000409417 NPR3P17342 541 aa21.01■□□□□ 0.95
PDLIM2-207ENST00000409417 ZNF132P52740 706 aa21.01■□□□□ 0.95
PDLIM2-207ENST00000409417 MAP3K7CLP57077 242 aa21.01■□□□□ 0.95
PDLIM2-207ENST00000409417 TDGQ13569 410 aa21.01■□□□□ 0.95
PDLIM2-207ENST00000409417 SGO2Q562F6 1265 aa21.01■□□□□ 0.95
PDLIM2-207ENST00000409417 STXBP5Q5T5C0 1151 aa21.01■□□□□ 0.95
PDLIM2-207ENST00000409417 SMYD5Q6GMV2 418 aa21.01■□□□□ 0.95
PDLIM2-207ENST00000409417 GJB7Q6PEY0 223 aa21.01■□□□□ 0.95
PDLIM2-207ENST00000409417 CLEC20AQ6ZU45 233 aa21.01■□□□□ 0.95
PDLIM2-207ENST00000409417 ZSCAN18Q8TBC5 510 aaPredicted RBP21.01■□□□□ 0.95
PDLIM2-207ENST00000409417 RSAD2Q8WXG1 361 aa21.01■□□□□ 0.95
PDLIM2-207ENST00000409417 FGF14Q92915 247 aa21.01■□□□□ 0.95
PDLIM2-207ENST00000409417 SMARCD2Q92925 531 aa21.01■□□□□ 0.95
PDLIM2-207ENST00000409417 ASB16Q96NS5 453 aa21.01■□□□□ 0.95
PDLIM2-207ENST00000409417 TASP1Q9H6P5 420 aa21.01■□□□□ 0.95
PDLIM2-207ENST00000409417 SOBPA7XYQ1 873 aa21.01■□□□□ 0.95
PDLIM2-207ENST00000409417 BECN2A8MW95 431 aa21.01■□□□□ 0.95
PDLIM2-207ENST00000409417 RNF225M0QZC1 329 aaPredicted RBP21.01■□□□□ 0.95
PDLIM2-207ENST00000409417 RTN3O95197 1032 aaPredicted RBP21.01■□□□□ 0.95
PDLIM2-207ENST00000409417 VDRP11473 427 aa21.01■□□□□ 0.95
PDLIM2-207ENST00000409417 CD19P15391 556 aa21.01■□□□□ 0.95
PDLIM2-207ENST00000409417 COPB1P53618 953 aaKnown RBP21.01■□□□□ 0.95
PDLIM2-207ENST00000409417 KCNMA1Q12791 1236 aa21.01■□□□□ 0.95
PDLIM2-207ENST00000409417 IQCB1Q15051 598 aa21.01■□□□□ 0.95
PDLIM2-207ENST00000409417 GPR158Q5T848 1215 aa21.01■□□□□ 0.95
PDLIM2-207ENST00000409417 DPY19L2P1Q6NXN4 242 aa21.01■□□□□ 0.95
PDLIM2-207ENST00000409417 SLC44A3Q8N4M1 653 aa21.01■□□□□ 0.95
PDLIM2-207ENST00000409417 ANKRD52Q8NB46 1076 aa21.01■□□□□ 0.95
PDLIM2-207ENST00000409417 RBBP8NLQ8NC74 664 aaPredicted RBP21.01■□□□□ 0.95
PDLIM2-207ENST00000409417 MRPS31Q92665 395 aaKnown RBP21.01■□□□□ 0.95
PDLIM2-207ENST00000409417 TRPV4Q9HBA0 871 aa21.01■□□□□ 0.95
PDLIM2-207ENST00000409417 PNPLA8Q9NP80 782 aa21.01■□□□□ 0.95
PDLIM2-207ENST00000409417 IL37Q9NZH6 218 aa21.01■□□□□ 0.95
PDLIM2-207ENST00000409417 TADA3O75528 432 aa21■□□□□ 0.95
PDLIM2-207ENST00000409417 ATP1A3P13637 1013 aa21■□□□□ 0.95
PDLIM2-207ENST00000409417 DDX6P26196 483 aaKnown RBP eCLIP21■□□□□ 0.95
PDLIM2-207ENST00000409417 YWHAQP27348 245 aa21■□□□□ 0.95
PDLIM2-207ENST00000409417 PPP3CCP48454 512 aa21■□□□□ 0.95
PDLIM2-207ENST00000409417 SLC5A3P53794 718 aa21■□□□□ 0.95
PDLIM2-207ENST00000409417 CYP4F8P98187 520 aa21■□□□□ 0.95
PDLIM2-207ENST00000409417 FKBP15Q5T1M5 1219 aa21■□□□□ 0.95
PDLIM2-207ENST00000409417 UBALD2Q8IYN6 164 aa21■□□□□ 0.95
PDLIM2-207ENST00000409417 ST13P5Q8NFI4 369 aaPredicted RBP21■□□□□ 0.95
PDLIM2-207ENST00000409417 SCAMP5Q8TAC9 235 aa21■□□□□ 0.95
PDLIM2-207ENST00000409417 ZFP14Q9HCL3 533 aa21■□□□□ 0.95
PDLIM2-207ENST00000409417 COMMD8Q9NX08 183 aa21■□□□□ 0.95
PDLIM2-207ENST00000409417 LGALS16A8MUM7 142 aa20.99■□□□□ 0.95
PDLIM2-207ENST00000409417 O00370 1275 aa20.99■□□□□ 0.95
PDLIM2-207ENST00000409417 ECI2O75521 394 aa20.99■□□□□ 0.95
PDLIM2-207ENST00000409417 KRT5P13647 590 aa20.99■□□□□ 0.95
PDLIM2-207ENST00000409417 FCARP24071 287 aa20.99■□□□□ 0.95
PDLIM2-207ENST00000409417 WEE1P30291 646 aa20.99■□□□□ 0.95
PDLIM2-207ENST00000409417 SLC8A3P57103 927 aa20.99■□□□□ 0.95
PDLIM2-207ENST00000409417 ZXDAP98168 799 aa20.99■□□□□ 0.95
PDLIM2-207ENST00000409417 TAF10Q12962 218 aa20.99■□□□□ 0.95
PDLIM2-207ENST00000409417 TANGO2Q6ICL3 276 aa20.99■□□□□ 0.95
PDLIM2-207ENST00000409417 APTXQ7Z2E3 356 aaKnown RBP20.99■□□□□ 0.95
PDLIM2-207ENST00000409417 MON1AQ86VX9 555 aa20.99■□□□□ 0.95
PDLIM2-207ENST00000409417 TFAP2BQ92481 460 aa20.99■□□□□ 0.95
PDLIM2-207ENST00000409417 SHC3Q92529 594 aa20.99■□□□□ 0.95
PDLIM2-207ENST00000409417 EDAQ92838 391 aa20.99■□□□□ 0.95
PDLIM2-207ENST00000409417 ELSPBP1Q96BH3 223 aa20.99■□□□□ 0.95
PDLIM2-207ENST00000409417 SLITRK1Q96PX8 696 aa20.99■□□□□ 0.95
PDLIM2-207ENST00000409417 RPP25Q9BUL9 199 aaKnown RBP20.99■□□□□ 0.95
PDLIM2-207ENST00000409417 SLC46A2Q9BY10 475 aa20.99■□□□□ 0.95
PDLIM2-207ENST00000409417 TRPM5Q9NZQ8 1165 aa20.99■□□□□ 0.95
PDLIM2-207ENST00000409417 DNAJC12Q9UKB3 198 aa20.99■□□□□ 0.95
PDLIM2-207ENST00000409417 HHLA1C9JL84 531 aa20.98■□□□□ 0.95
PDLIM2-207ENST00000409417 ARHGAP44Q17R89 818 aa20.98■□□□□ 0.95
PDLIM2-207ENST00000409417 GOLGA7BQ2TAP0 167 aa20.98■□□□□ 0.95
PDLIM2-207ENST00000409417 KLHDC7AQ5VTJ3 777 aa20.98■□□□□ 0.95
PDLIM2-207ENST00000409417 TXNDC8Q6A555 127 aa20.98■□□□□ 0.95
PDLIM2-207ENST00000409417 LCLAT1Q6UWP7 414 aa20.98■□□□□ 0.95
PDLIM2-207ENST00000409417 ARID3BQ8IVW6 561 aaPredicted RBP20.98■□□□□ 0.95
PDLIM2-207ENST00000409417 CMTM8Q8IZV2 173 aa20.98■□□□□ 0.95
PDLIM2-207ENST00000409417 KXD1Q9BQD3 176 aa20.98■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms