RNA–Protein interactions for RNA: ENST00000409025.5

USP39-202, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5 BASIC

Gene USP39, Length 1,946 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-202ENST00000409025 IL1R2P27930 398 aa19.92■□□□□ 0.78
USP39-202ENST00000409025 PCK1P35558 622 aa19.92■□□□□ 0.78
USP39-202ENST00000409025 CDKN2BP42772 138 aa19.92■□□□□ 0.78
USP39-202ENST00000409025 OLFML1Q6UWY5 402 aa19.92■□□□□ 0.78
USP39-202ENST00000409025 ZDHHC24Q6UX98 284 aa19.92■□□□□ 0.78
USP39-202ENST00000409025 TMC3Q7Z5M5 1100 aa19.92■□□□□ 0.78
USP39-202ENST00000409025 FAM129AQ9BZQ8 928 aa19.92■□□□□ 0.78
USP39-202ENST00000409025 CYLDQ9NQC7 956 aa19.92■□□□□ 0.78
USP39-202ENST00000409025 SQORQ9Y6N5 450 aa19.92■□□□□ 0.78
USP39-202ENST00000409025 INHAP05111 366 aa19.91■□□□□ 0.78
USP39-202ENST00000409025 SKIP12755 728 aa19.91■□□□□ 0.78
USP39-202ENST00000409025 MIPP30301 263 aa19.91■□□□□ 0.78
USP39-202ENST00000409025 RPL9P32969 192 aaKnown RBP19.91■□□□□ 0.78
USP39-202ENST00000409025 HSD17B3P37058 310 aa19.91■□□□□ 0.78
USP39-202ENST00000409025 SCNN1GP51170 649 aa19.91■□□□□ 0.78
USP39-202ENST00000409025 DHX9Q08211 1270 aaKnown RBP19.91■□□□□ 0.78
USP39-202ENST00000409025 PTK6Q13882 451 aa19.91■□□□□ 0.78
USP39-202ENST00000409025 ARHGEF6Q15052 776 aa19.91■□□□□ 0.78
USP39-202ENST00000409025 SMTNL2Q2TAL5 461 aa19.91■□□□□ 0.78
USP39-202ENST00000409025 WSCD1Q658N2 575 aa19.91■□□□□ 0.78
USP39-202ENST00000409025 RNF169Q8NCN4 708 aa19.91■□□□□ 0.78
USP39-202ENST00000409025 B3GALNT2Q8NCR0 500 aa19.91■□□□□ 0.78
USP39-202ENST00000409025 SLC2A14Q8TDB8 520 aa19.91■□□□□ 0.78
USP39-202ENST00000409025 PIK3R5Q8WYR1 880 aa19.91■□□□□ 0.78
USP39-202ENST00000409025 PGBD4Q96DM1 585 aa19.91■□□□□ 0.78
USP39-202ENST00000409025 PIWIL1Q96J94 861 aaKnown RBP19.91■□□□□ 0.78
USP39-202ENST00000409025 SENP8Q96LD8 212 aa19.91■□□□□ 0.78
USP39-202ENST00000409025 SH3GL2Q99962 352 aa19.91■□□□□ 0.78
USP39-202ENST00000409025 RSAD1Q9HA92 442 aa19.91■□□□□ 0.78
USP39-202ENST00000409025 MTRF1LQ9UGC7 380 aaKnown RBP19.91■□□□□ 0.78
USP39-202ENST00000409025 PCSK1NQ9UHG2 260 aa19.91■□□□□ 0.78
USP39-202ENST00000409025 USP18Q9UMW8 372 aa19.91■□□□□ 0.78
USP39-202ENST00000409025 EFR3BQ9Y2G0 817 aa19.91■□□□□ 0.78
USP39-202ENST00000409025 A0A0U1RQF3 1178 aa19.9■□□□□ 0.78
USP39-202ENST00000409025 GRAP2O75791 330 aa19.9■□□□□ 0.78
USP39-202ENST00000409025 CAPN15O75808 1086 aa19.9■□□□□ 0.78
USP39-202ENST00000409025 TRUB2O95900 331 aaKnown RBP19.9■□□□□ 0.78
USP39-202ENST00000409025 DESP17661 470 aa19.9■□□□□ 0.78
USP39-202ENST00000409025 ACADSBP45954 432 aa19.9■□□□□ 0.78
USP39-202ENST00000409025 CLCNKBP51801 687 aa19.9■□□□□ 0.78
USP39-202ENST00000409025 AFF1P51825 1210 aaKnown RBP19.9■□□□□ 0.78
USP39-202ENST00000409025 LMNB2Q03252 620 aa19.9■□□□□ 0.78
USP39-202ENST00000409025 CALCOCO2Q13137 446 aa19.9■□□□□ 0.78
USP39-202ENST00000409025 TERF2Q15554 542 aa19.9■□□□□ 0.78
USP39-202ENST00000409025 SCUBE3Q8IX30 993 aa19.9■□□□□ 0.78
USP39-202ENST00000409025 FBXO25Q8TCJ0 367 aa19.9■□□□□ 0.78
USP39-202ENST00000409025 ADAM2Q99965 735 aa19.9■□□□□ 0.78
USP39-202ENST00000409025 HMX1Q9NP08 348 aaPredicted RBP19.9■□□□□ 0.78
USP39-202ENST00000409025 ASIC3Q9UHC3 531 aa19.9■□□□□ 0.78
USP39-202ENST00000409025 C3orf70A6NLC5 250 aaPredicted RBP19.9■□□□□ 0.78
USP39-202ENST00000409025 GOLGA8KD6RF30 607 aa19.9■□□□□ 0.78
USP39-202ENST00000409025 DPYSL4O14531 572 aa19.9■□□□□ 0.78
USP39-202ENST00000409025 GABRDO14764 452 aa19.9■□□□□ 0.78
USP39-202ENST00000409025 PAPSS1O43252 624 aaPredicted RBP19.9■□□□□ 0.78
USP39-202ENST00000409025 KDELR1P24390 212 aa19.9■□□□□ 0.78
USP39-202ENST00000409025 ADCY2Q08462 1091 aa19.9■□□□□ 0.78
USP39-202ENST00000409025 KCNT1Q5JUK3 1230 aa19.9■□□□□ 0.78
USP39-202ENST00000409025 TRNP1Q6NT89 227 aa19.9■□□□□ 0.78
USP39-202ENST00000409025 TMEM86AQ8N2M4 240 aa19.9■□□□□ 0.78
USP39-202ENST00000409025 SLAIN1Q8ND83 568 aa19.9■□□□□ 0.78
USP39-202ENST00000409025 UBLCP1Q8WVY7 318 aaPredicted RBP19.9■□□□□ 0.78
USP39-202ENST00000409025 ART4Q93070 314 aa19.9■□□□□ 0.78
USP39-202ENST00000409025 HNRNPABQ99729 332 aaKnown RBP19.9■□□□□ 0.78
USP39-202ENST00000409025 UBN1Q9NPG3 1134 aa19.9■□□□□ 0.78
USP39-202ENST00000409025 WHRNQ9P202 907 aa19.9■□□□□ 0.78
USP39-202ENST00000409025 CACNG4Q9UBN1 327 aa19.9■□□□□ 0.78
USP39-202ENST00000409025 PLAAQ9Y263 795 aa19.9■□□□□ 0.78
USP39-202ENST00000409025 PPFIA2O75334 1257 aa19.89■□□□□ 0.77
USP39-202ENST00000409025 PTPN1P18031 435 aaKnown RBP19.89■□□□□ 0.77
USP39-202ENST00000409025 RPL34P49207 117 aaKnown RBP19.89■□□□□ 0.77
USP39-202ENST00000409025 SPDYCQ5MJ68 293 aa19.89■□□□□ 0.77
USP39-202ENST00000409025 DRICH1Q6PGQ1 229 aaPredicted RBP19.89■□□□□ 0.77
USP39-202ENST00000409025 LRIG3Q6UXM1 1119 aa19.89■□□□□ 0.77
USP39-202ENST00000409025 DSTYKQ6XUX3 929 aa19.89■□□□□ 0.77
USP39-202ENST00000409025 KCTD6Q8NC69 237 aa19.89■□□□□ 0.77
USP39-202ENST00000409025 HSFY1Q96LI6 401 aa19.89■□□□□ 0.77
USP39-202ENST00000409025 FAM118BQ9BPY3 351 aa19.89■□□□□ 0.77
USP39-202ENST00000409025 LIASO43766 372 aa19.88■□□□□ 0.77
USP39-202ENST00000409025 FKTNO75072 461 aa19.88■□□□□ 0.77
USP39-202ENST00000409025 GABBR2O75899 941 aa19.88■□□□□ 0.77
USP39-202ENST00000409025 IBSPP21815 317 aaPredicted RBP19.88■□□□□ 0.77
USP39-202ENST00000409025 SDC4P31431 198 aa19.88■□□□□ 0.77
USP39-202ENST00000409025 SCNN1AP37088 669 aa19.88■□□□□ 0.77
USP39-202ENST00000409025 LHX1P48742 406 aa19.88■□□□□ 0.77
USP39-202ENST00000409025 SLC8A3P57103 927 aa19.88■□□□□ 0.77
USP39-202ENST00000409025 UAP1Q16222 522 aaPredicted RBP19.88■□□□□ 0.77
USP39-202ENST00000409025 CCDC14Q49A88 953 aa19.88■□□□□ 0.77
USP39-202ENST00000409025 LHX8Q68G74 356 aa19.88■□□□□ 0.77
USP39-202ENST00000409025 ZNF365Q70YC5 407 aa19.88■□□□□ 0.77
USP39-202ENST00000409025 CMASQ8NFW8 434 aaPredicted RBP19.88■□□□□ 0.77
USP39-202ENST00000409025 CASTOR2A6NHX0 329 aa19.88■□□□□ 0.77
USP39-202ENST00000409025 ATP2C2O75185 946 aa19.88■□□□□ 0.77
USP39-202ENST00000409025 CKBP12277 381 aa19.88■□□□□ 0.77
USP39-202ENST00000409025 ITIH2P19823 946 aa19.88■□□□□ 0.77
USP39-202ENST00000409025 IGFBP6P24592 240 aaPredicted RBP19.88■□□□□ 0.77
USP39-202ENST00000409025 ACAT1P24752 427 aaKnown RBP19.88■□□□□ 0.77
USP39-202ENST00000409025 VEGFBP49765 207 aa19.88■□□□□ 0.77
USP39-202ENST00000409025 GYS2P54840 703 aa19.88■□□□□ 0.77
USP39-202ENST00000409025 BYSLQ13895 437 aaKnown RBP19.88■□□□□ 0.77
USP39-202ENST00000409025 TAF5Q15542 800 aa19.88■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms