RNA–Protein interactions for RNA: ENST00000406659.3

DNMT3A-206, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 1 (best) BASIC

Gene DNMT3A, Length 1,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-206ENST00000406659 TSPYL1Q9H0U9 437 aa25.9■■□□□ 1.74
DNMT3A-206ENST00000406659 ERICH4A6NGS2 130 aa25.89■■□□□ 1.73
DNMT3A-206ENST00000406659 PTGESO14684 152 aa25.89■■□□□ 1.73
DNMT3A-206ENST00000406659 HCRTO43612 131 aa25.89■■□□□ 1.73
DNMT3A-206ENST00000406659 GRAP2O75791 330 aa25.89■■□□□ 1.73
DNMT3A-206ENST00000406659 ASGR1P07306 291 aa25.89■■□□□ 1.73
DNMT3A-206ENST00000406659 LMO2P25791 158 aa25.89■■□□□ 1.73
DNMT3A-206ENST00000406659 ADORA2BP29275 332 aa25.89■■□□□ 1.73
DNMT3A-206ENST00000406659 LRPAP1P30533 357 aa25.89■■□□□ 1.73
DNMT3A-206ENST00000406659 SLC6A3Q01959 620 aa25.89■■□□□ 1.73
DNMT3A-206ENST00000406659 KCNA10Q16322 511 aa25.89■■□□□ 1.73
DNMT3A-206ENST00000406659 KRT71Q3SY84 523 aa25.89■■□□□ 1.73
DNMT3A-206ENST00000406659 LIMS2Q7Z4I7 341 aa25.89■■□□□ 1.73
DNMT3A-206ENST00000406659 ADGRF2Q8IZF7 708 aa25.89■■□□□ 1.73
DNMT3A-206ENST00000406659 ANKRD52Q8NB46 1076 aa25.89■■□□□ 1.73
DNMT3A-206ENST00000406659 CCHCR1Q8TD31 782 aa25.89■■□□□ 1.73
DNMT3A-206ENST00000406659 HSPH1Q92598 858 aa25.89■■□□□ 1.73
DNMT3A-206ENST00000406659 ZFP42Q96MM3 310 aa25.89■■□□□ 1.73
DNMT3A-206ENST00000406659 PPP1R10Q96QC0 940 aaKnown RBP25.89■■□□□ 1.73
DNMT3A-206ENST00000406659 TRAIPQ9BWF2 469 aa25.89■■□□□ 1.73
DNMT3A-206ENST00000406659 EPB41L4BQ9H329 900 aa25.89■■□□□ 1.73
DNMT3A-206ENST00000406659 SEMA4AQ9H3S1 761 aa25.89■■□□□ 1.73
DNMT3A-206ENST00000406659 FAM105AQ9NUU6 356 aa25.89■■□□□ 1.73
DNMT3A-206ENST00000406659 BCCIPQ9P287 314 aaKnown RBP eCLIP25.89■■□□□ 1.73
DNMT3A-206ENST00000406659 NUDT17P0C025 328 aa25.88■■□□□ 1.73
DNMT3A-206ENST00000406659 CCDC130P13994 396 aa25.88■■□□□ 1.73
DNMT3A-206ENST00000406659 CCND3P30281 292 aaPredicted RBP25.88■■□□□ 1.73
DNMT3A-206ENST00000406659 BCAT1P54687 386 aa25.88■■□□□ 1.73
DNMT3A-206ENST00000406659 BST2Q10589 180 aaKnown RBP25.88■■□□□ 1.73
DNMT3A-206ENST00000406659 ZNF618Q5T7W0 954 aa25.88■■□□□ 1.73
DNMT3A-206ENST00000406659 AGBL2Q5U5Z8 902 aa25.88■■□□□ 1.73
DNMT3A-206ENST00000406659 RHBDF2Q6PJF5 856 aa25.88■■□□□ 1.73
DNMT3A-206ENST00000406659 OLFML1Q6UWY5 402 aa25.88■■□□□ 1.73
DNMT3A-206ENST00000406659 RPAINQ86UA6 219 aa25.88■■□□□ 1.73
DNMT3A-206ENST00000406659 TOP6BLQ8N6T0 577 aa25.88■■□□□ 1.73
DNMT3A-206ENST00000406659 CMASQ8NFW8 434 aaPredicted RBP25.88■■□□□ 1.73
DNMT3A-206ENST00000406659 HAUS1Q96CS2 278 aa25.88■■□□□ 1.73
DNMT3A-206ENST00000406659 PIWIL1Q96J94 861 aaKnown RBP25.88■■□□□ 1.73
DNMT3A-206ENST00000406659 TNIP3Q96KP6 325 aa25.88■■□□□ 1.73
DNMT3A-206ENST00000406659 SLC38A7Q9NVC3 462 aa25.88■■□□□ 1.73
DNMT3A-206ENST00000406659 GPR182O15218 404 aa25.87■■□□□ 1.73
DNMT3A-206ENST00000406659 DESP17661 470 aa25.87■■□□□ 1.73
DNMT3A-206ENST00000406659 WARSP23381 471 aaKnown RBP25.87■■□□□ 1.73
DNMT3A-206ENST00000406659 KLRC2P26717 231 aa25.87■■□□□ 1.73
DNMT3A-206ENST00000406659 VCPP55072 806 aaKnown RBP25.87■■□□□ 1.73
DNMT3A-206ENST00000406659 PLCB3Q01970 1234 aa25.87■■□□□ 1.73
DNMT3A-206ENST00000406659 TAZQ16635 292 aa25.87■■□□□ 1.73
DNMT3A-206ENST00000406659 ZDHHC17Q8IUH5 632 aa25.87■■□□□ 1.73
DNMT3A-206ENST00000406659 SCUBE3Q8IX30 993 aa25.87■■□□□ 1.73
DNMT3A-206ENST00000406659 TTC13Q8NBP0 860 aa25.87■■□□□ 1.73
DNMT3A-206ENST00000406659 TP73O15350 636 aa25.87■■□□□ 1.73
DNMT3A-206ENST00000406659 DYNLT1P63172 113 aa25.87■■□□□ 1.73
DNMT3A-206ENST00000406659 SKOR1P84550 965 aa25.87■■□□□ 1.73
DNMT3A-206ENST00000406659 NOGQ13253 232 aa25.87■■□□□ 1.73
DNMT3A-206ENST00000406659 SLC29A2Q14542 456 aa25.87■■□□□ 1.73
DNMT3A-206ENST00000406659 TRNP1Q6NT89 227 aa25.87■■□□□ 1.73
DNMT3A-206ENST00000406659 LEKR1Q6ZMV7 388 aa25.87■■□□□ 1.73
DNMT3A-206ENST00000406659 ALLCQ8N6M5 410 aa25.87■■□□□ 1.73
DNMT3A-206ENST00000406659 NKD2Q969F2 451 aaPredicted RBP25.87■■□□□ 1.73
DNMT3A-206ENST00000406659 CAPS2Q9BXY5 557 aa25.87■■□□□ 1.73
DNMT3A-206ENST00000406659 FRMD8P1Q9BZ68 369 aaPredicted RBP25.87■■□□□ 1.73
DNMT3A-206ENST00000406659 GPBP1L1Q9HC44 474 aaPredicted RBP25.87■■□□□ 1.73
DNMT3A-206ENST00000406659 DPYSL4O14531 572 aa25.86■■□□□ 1.73
DNMT3A-206ENST00000406659 CYB561D2O14569 222 aa25.86■■□□□ 1.73
DNMT3A-206ENST00000406659 PRPSAP2O60256 369 aa25.86■■□□□ 1.73
DNMT3A-206ENST00000406659 CST8O60676 142 aa25.86■■□□□ 1.73
DNMT3A-206ENST00000406659 PRKAR2AP13861 404 aaKnown RBP25.86■■□□□ 1.73
DNMT3A-206ENST00000406659 NR1D1P20393 614 aa25.86■■□□□ 1.73
DNMT3A-206ENST00000406659 THPOP40225 353 aa25.86■■□□□ 1.73
DNMT3A-206ENST00000406659 SP3Q02447 781 aa25.86■■□□□ 1.73
DNMT3A-206ENST00000406659 MGAT3Q09327 533 aa25.86■■□□□ 1.73
DNMT3A-206ENST00000406659 C15orf59Q2T9L4 293 aaPredicted RBP25.86■■□□□ 1.73
DNMT3A-206ENST00000406659 SH3PXD2AQ5TCZ1 1133 aa25.86■■□□□ 1.73
DNMT3A-206ENST00000406659 IZUMO3Q5VZ72 239 aa25.86■■□□□ 1.73
DNMT3A-206ENST00000406659 KDM7AQ6ZMT4 941 aa25.86■■□□□ 1.73
DNMT3A-206ENST00000406659 BBS12Q6ZW61 710 aa25.86■■□□□ 1.73
DNMT3A-206ENST00000406659 TRMT10CQ7L0Y3 403 aaKnown RBP25.86■■□□□ 1.73
DNMT3A-206ENST00000406659 HOOK3Q86VS8 718 aa25.86■■□□□ 1.73
DNMT3A-206ENST00000406659 RFX6Q8HWS3 928 aa25.86■■□□□ 1.73
DNMT3A-206ENST00000406659 KLHDC9Q8NEP7 349 aa25.86■■□□□ 1.73
DNMT3A-206ENST00000406659 PAPSS1O43252 624 aaPredicted RBP25.85■■□□□ 1.73
DNMT3A-206ENST00000406659 ELNP15502 786 aa25.85■■□□□ 1.73
DNMT3A-206ENST00000406659 TAF5Q15542 800 aa25.85■■□□□ 1.73
DNMT3A-206ENST00000406659 PTGISQ16647 500 aa25.85■■□□□ 1.73
DNMT3A-206ENST00000406659 CDO1Q16878 200 aa25.85■■□□□ 1.73
DNMT3A-206ENST00000406659 CCDC14Q49A88 953 aa25.85■■□□□ 1.73
DNMT3A-206ENST00000406659 RIPK2O43353 540 aa25.84■■□□□ 1.73
DNMT3A-206ENST00000406659 SHOX2O60902 331 aaPredicted RBP25.84■■□□□ 1.73
DNMT3A-206ENST00000406659 AOC2O75106 756 aa25.84■■□□□ 1.73
DNMT3A-206ENST00000406659 GABBR2O75899 941 aa25.84■■□□□ 1.73
DNMT3A-206ENST00000406659 SHBGP04278 402 aa25.84■■□□□ 1.73
DNMT3A-206ENST00000406659 ITGAVP06756 1048 aa25.84■■□□□ 1.73
DNMT3A-206ENST00000406659 CD48P09326 243 aa25.84■■□□□ 1.73
DNMT3A-206ENST00000406659 FAM163BP0C2L3 166 aa25.84■■□□□ 1.73
DNMT3A-206ENST00000406659 SDC4P31431 198 aa25.84■■□□□ 1.73
DNMT3A-206ENST00000406659 ACTN2P35609 894 aa25.84■■□□□ 1.73
DNMT3A-206ENST00000406659 MLH1P40692 756 aa25.84■■□□□ 1.73
DNMT3A-206ENST00000406659 OASLQ15646 514 aaKnown RBP25.84■■□□□ 1.73
DNMT3A-206ENST00000406659 OSTM1Q86WC4 334 aa25.84■■□□□ 1.73
DNMT3A-206ENST00000406659 SLC2A14Q8TDB8 520 aa25.84■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms