RNA–Protein interactions for RNA: ENST00000404424.5

CLIP4-204, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLIP4, Length 2,480 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-204ENST00000404424 PCK1P35558 622 aa11.23□□□□□ -0.61
CLIP4-204ENST00000404424 GABRB2P47870 512 aa11.23□□□□□ -0.61
CLIP4-204ENST00000404424 LAMTOR4Q0VGL1 99 aa11.23□□□□□ -0.61
CLIP4-204ENST00000404424 CTC1Q2NKJ3 1217 aa11.23□□□□□ -0.61
CLIP4-204ENST00000404424 MPZL3Q6UWV2 235 aa11.23□□□□□ -0.61
CLIP4-204ENST00000404424 TSHZ1Q6ZSZ6 1077 aa11.23□□□□□ -0.61
CLIP4-204ENST00000404424 MTDHQ86UE4 582 aaKnown RBP11.23□□□□□ -0.61
CLIP4-204ENST00000404424 BCO2Q9BYV7 579 aa11.23□□□□□ -0.61
CLIP4-204ENST00000404424 SYNCQ9H7C4 482 aa11.23□□□□□ -0.61
CLIP4-204ENST00000404424 METTL5Q9NRN9 209 aaKnown RBP11.23□□□□□ -0.61
CLIP4-204ENST00000404424 ASNSD1Q9NWL6 643 aa11.23□□□□□ -0.61
CLIP4-204ENST00000404424 CYTH4Q9UIA0 394 aa11.23□□□□□ -0.61
CLIP4-204ENST00000404424 LRRC42Q9Y546 428 aa11.23□□□□□ -0.61
CLIP4-204ENST00000404424 IKBKGQ9Y6K9 419 aa11.23□□□□□ -0.61
CLIP4-204ENST00000404424 LCTP09848 1927 aa11.23□□□□□ -0.61
CLIP4-204ENST00000404424 TCRBV7S3A2A0A539 114 aa11.23□□□□□ -0.61
CLIP4-204ENST00000404424 LPXNO60711 386 aa11.23□□□□□ -0.61
CLIP4-204ENST00000404424 CCDC22O60826 627 aa11.23□□□□□ -0.61
CLIP4-204ENST00000404424 DNAJC6O75061 913 aa11.23□□□□□ -0.61
CLIP4-204ENST00000404424 TRUB2O95900 331 aaKnown RBP11.23□□□□□ -0.61
CLIP4-204ENST00000404424 DHRS4L1P0CG22 281 aa11.23□□□□□ -0.61
CLIP4-204ENST00000404424 TPBGLP0DKB5 382 aa11.23□□□□□ -0.61
CLIP4-204ENST00000404424 MARK3P27448 753 aa11.23□□□□□ -0.61
CLIP4-204ENST00000404424 BASP1P80723 227 aaKnown RBP11.23□□□□□ -0.61
CLIP4-204ENST00000404424 CNTN2Q02246 1040 aa11.23□□□□□ -0.61
CLIP4-204ENST00000404424 SLC18A2Q05940 514 aa11.23□□□□□ -0.61
CLIP4-204ENST00000404424 PLEKHG4Q58EX7 1191 aa11.23□□□□□ -0.61
CLIP4-204ENST00000404424 CMPK2Q5EBM0 449 aa11.23□□□□□ -0.61
CLIP4-204ENST00000404424 ZNF667Q5HYK9 610 aa11.23□□□□□ -0.61
CLIP4-204ENST00000404424 MICALL2Q8IY33 904 aa11.23□□□□□ -0.61
CLIP4-204ENST00000404424 TEX9Q8N6V9 391 aa11.23□□□□□ -0.61
CLIP4-204ENST00000404424 RNF149Q8NC42 400 aa11.23□□□□□ -0.61
CLIP4-204ENST00000404424 SLC44A1Q8WWI5 657 aa11.23□□□□□ -0.61
CLIP4-204ENST00000404424 TSSK1BQ9BXA7 367 aa11.23□□□□□ -0.61
CLIP4-204ENST00000404424 ADAM33Q9BZ11 813 aa11.23□□□□□ -0.61
CLIP4-204ENST00000404424 FRMD8Q9BZ67 464 aaPredicted RBP11.23□□□□□ -0.61
CLIP4-204ENST00000404424 USP18Q9UMW8 372 aa11.23□□□□□ -0.61
CLIP4-204ENST00000404424 MTO1Q9Y2Z2 717 aaKnown RBP11.23□□□□□ -0.61
CLIP4-204ENST00000404424 LOC285556D6RIA3 1793 aa11.22□□□□□ -0.61
CLIP4-204ENST00000404424 IGKV6-21A0A0C4DH24 114 aa11.22□□□□□ -0.61
CLIP4-204ENST00000404424 CHADO15335 359 aa11.22□□□□□ -0.61
CLIP4-204ENST00000404424 IL18RAPO95256 599 aa11.22□□□□□ -0.61
CLIP4-204ENST00000404424 CD48P09326 243 aa11.22□□□□□ -0.61
CLIP4-204ENST00000404424 EDNRBP24530 442 aa11.22□□□□□ -0.61
CLIP4-204ENST00000404424 EPHB2P29323 1055 aa11.22□□□□□ -0.61
CLIP4-204ENST00000404424 MIPP30301 263 aa11.22□□□□□ -0.61
CLIP4-204ENST00000404424 TCF7P36402 384 aaPredicted RBP11.22□□□□□ -0.61
CLIP4-204ENST00000404424 NEK3P51956 506 aa11.22□□□□□ -0.61
CLIP4-204ENST00000404424 RAD23BP54727 409 aa11.22□□□□□ -0.61
CLIP4-204ENST00000404424 ZNF200P98182 395 aaPredicted RBP11.22□□□□□ -0.61
CLIP4-204ENST00000404424 ROR1Q01973 937 aa11.22□□□□□ -0.61
CLIP4-204ENST00000404424 PTK7Q13308 1070 aa11.22□□□□□ -0.61
CLIP4-204ENST00000404424 FAM47CQ5HY64 1035 aa11.22□□□□□ -0.61
CLIP4-204ENST00000404424 METTL7BQ6UX53 244 aa11.22□□□□□ -0.61
CLIP4-204ENST00000404424 SAMD7Q7Z3H4 446 aa11.22□□□□□ -0.61
CLIP4-204ENST00000404424 FAM71DQ8N9W8 422 aa11.22□□□□□ -0.61
CLIP4-204ENST00000404424 SLC4A11Q8NBS3 891 aa11.22□□□□□ -0.61
CLIP4-204ENST00000404424 SPATA18Q8TC71 538 aa11.22□□□□□ -0.61
CLIP4-204ENST00000404424 MCRS1Q96EZ8 462 aa11.22□□□□□ -0.61
CLIP4-204ENST00000404424 NAF1Q96HR8 494 aaKnown RBP11.22□□□□□ -0.61
CLIP4-204ENST00000404424 APOPT1Q96IL0 206 aa11.22□□□□□ -0.61
CLIP4-204ENST00000404424 NUDCD1Q96RS6 583 aa11.22□□□□□ -0.61
CLIP4-204ENST00000404424 CPXM1Q96SM3 734 aa11.22□□□□□ -0.61
CLIP4-204ENST00000404424 DCLRE1BQ9H816 532 aa11.22□□□□□ -0.61
CLIP4-204ENST00000404424 C10orf88Q9H8K7 445 aa11.22□□□□□ -0.61
CLIP4-204ENST00000404424 PTPRHQ9HD43 1115 aa11.22□□□□□ -0.61
CLIP4-204ENST00000404424 PNPLA8Q9NP80 782 aa11.22□□□□□ -0.61
CLIP4-204ENST00000404424 SLC17A7Q9P2U7 560 aa11.22□□□□□ -0.61
CLIP4-204ENST00000404424 NXF1Q9UBU9 619 aaKnown RBP11.22□□□□□ -0.61
CLIP4-204ENST00000404424 NKX1-2Q9UD57 310 aaPredicted RBP11.22□□□□□ -0.61
CLIP4-204ENST00000404424 WDR91A4D1P6 747 aa11.21□□□□□ -0.61
CLIP4-204ENST00000404424 ACKR2O00590 384 aa11.21□□□□□ -0.61
CLIP4-204ENST00000404424 FAM155BO75949 473 aa11.21□□□□□ -0.61
CLIP4-204ENST00000404424 ENDOD1O94919 500 aa11.21□□□□□ -0.61
CLIP4-204ENST00000404424 INHBAP08476 426 aa11.21□□□□□ -0.61
CLIP4-204ENST00000404424 SRGAP2CP0DJJ0 459 aa11.21□□□□□ -0.61
CLIP4-204ENST00000404424 ETV4P43268 484 aa11.21□□□□□ -0.61
CLIP4-204ENST00000404424 ARFIP2P53365 341 aa11.21□□□□□ -0.61
CLIP4-204ENST00000404424 FSTL1Q12841 308 aa11.21□□□□□ -0.61
CLIP4-204ENST00000404424 TFDP2Q14188 446 aa11.21□□□□□ -0.61
CLIP4-204ENST00000404424 NOMO1Q15155 1222 aa11.21□□□□□ -0.61
CLIP4-204ENST00000404424 TAF11Q15544 211 aa11.21□□□□□ -0.61
CLIP4-204ENST00000404424 EMC1Q8N766 993 aa11.21□□□□□ -0.61
CLIP4-204ENST00000404424 PIM2Q9P1W9 311 aa11.21□□□□□ -0.61
CLIP4-204ENST00000404424 TJP2Q9UDY2 1190 aa11.21□□□□□ -0.61
CLIP4-204ENST00000404424 PCSK1NQ9UHG2 260 aa11.21□□□□□ -0.61
CLIP4-204ENST00000404424 POLIQ9UNA4 740 aa11.21□□□□□ -0.61
CLIP4-204ENST00000404424 CHMP2BQ9UQN3 213 aa11.21□□□□□ -0.61
CLIP4-204ENST00000404424 TEX264Q9Y6I9 313 aa11.21□□□□□ -0.61
CLIP4-204ENST00000404424 KLF11O14901 512 aa11.21□□□□□ -0.61
CLIP4-204ENST00000404424 HAUS5O94927 633 aa11.21□□□□□ -0.61
CLIP4-204ENST00000404424 ERBB2P04626 1255 aa11.21□□□□□ -0.61
CLIP4-204ENST00000404424 ELK3P41970 407 aa11.21□□□□□ -0.61
CLIP4-204ENST00000404424 PSMC4P43686 418 aa11.21□□□□□ -0.61
CLIP4-204ENST00000404424 PTPN11Q06124 597 aaPredicted RBP11.21□□□□□ -0.61
CLIP4-204ENST00000404424 KCNJ11Q14654 390 aa11.21□□□□□ -0.61
CLIP4-204ENST00000404424 SH3D19Q5HYK7 790 aa11.21□□□□□ -0.61
CLIP4-204ENST00000404424 ATF7IP2Q5U623 682 aa11.21□□□□□ -0.61
CLIP4-204ENST00000404424 DARS2Q6PI48 645 aaKnown RBP11.21□□□□□ -0.61
CLIP4-204ENST00000404424 SH2D5Q6ZV89 423 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms