RNA–Protein interactions for RNA: ENST00000399523.5

UFD1-202, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 1 (best) BASIC

Gene UFD1, Length 1,007 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-202ENST00000399523 ADGRG2Q8IZP9 1017 aa19.39■□□□□ 0.69
UFD1-202ENST00000399523 FSIP1Q8NA03 581 aa19.39■□□□□ 0.69
UFD1-202ENST00000399523 HMGB4Q8WW32 186 aa19.39■□□□□ 0.69
UFD1-202ENST00000399523 C8orf76Q96K31 380 aa19.39■□□□□ 0.69
UFD1-202ENST00000399523 PKMYT1Q99640 499 aa19.39■□□□□ 0.69
UFD1-202ENST00000399523 ACBD6Q9BR61 282 aa19.39■□□□□ 0.69
UFD1-202ENST00000399523 SCUBE2Q9NQ36 999 aa19.39■□□□□ 0.69
UFD1-202ENST00000399523 NOL7Q9UMY1 257 aaKnown RBP19.39■□□□□ 0.69
UFD1-202ENST00000399523 KAT7O95251 611 aa19.38■□□□□ 0.69
UFD1-202ENST00000399523 CYP17A1P05093 508 aa19.38■□□□□ 0.69
UFD1-202ENST00000399523 TIE1P35590 1138 aa19.38■□□□□ 0.69
UFD1-202ENST00000399523 EIF2DP41214 584 aaKnown RBP19.38■□□□□ 0.69
UFD1-202ENST00000399523 PRPHP41219 470 aa19.38■□□□□ 0.69
UFD1-202ENST00000399523 PDE6CP51160 858 aa19.38■□□□□ 0.69
UFD1-202ENST00000399523 SV2CQ496J9 727 aa19.38■□□□□ 0.69
UFD1-202ENST00000399523 EMC10Q5UCC4 262 aa19.38■□□□□ 0.69
UFD1-202ENST00000399523 OR2I1PQ8NGU4 316 aa19.38■□□□□ 0.69
UFD1-202ENST00000399523 SPATA18Q8TC71 538 aa19.38■□□□□ 0.69
UFD1-202ENST00000399523 CAMK1GQ96NX5 476 aa19.38■□□□□ 0.69
UFD1-202ENST00000399523 PNKPQ96T60 521 aa19.38■□□□□ 0.69
UFD1-202ENST00000399523 NPHP3-ACAD11A0A0J9YXS1 232 aa19.37■□□□□ 0.69
UFD1-202ENST00000399523 LAD1O00515 517 aa19.37■□□□□ 0.69
UFD1-202ENST00000399523 SH3BP5O60239 455 aa19.37■□□□□ 0.69
UFD1-202ENST00000399523 GJB3O75712 270 aa19.37■□□□□ 0.69
UFD1-202ENST00000399523 FTH1P19P0C7X4 201 aa19.37■□□□□ 0.69
UFD1-202ENST00000399523 PFKLP17858 780 aa19.37■□□□□ 0.69
UFD1-202ENST00000399523 SLC6A11P48066 632 aa19.37■□□□□ 0.69
UFD1-202ENST00000399523 ACOT2P49753 483 aa19.37■□□□□ 0.69
UFD1-202ENST00000399523 TOB1P50616 345 aaPredicted RBP19.37■□□□□ 0.69
UFD1-202ENST00000399523 CFAP221Q4G0U5 840 aa19.37■□□□□ 0.69
UFD1-202ENST00000399523 ARSHQ5FYA8 562 aa19.37■□□□□ 0.69
UFD1-202ENST00000399523 INTS6LQ5JSJ4 861 aaKnown RBP19.37■□□□□ 0.69
UFD1-202ENST00000399523 SLC36A4Q6YBV0 504 aa19.37■□□□□ 0.69
UFD1-202ENST00000399523 PDCL2Q8N4E4 241 aa19.37■□□□□ 0.69
UFD1-202ENST00000399523 FBXO18Q8NFZ0 1043 aa19.37■□□□□ 0.69
UFD1-202ENST00000399523 HNRNPLLQ8WVV9 542 aaKnown RBP19.37■□□□□ 0.69
UFD1-202ENST00000399523 PNMA5Q96PV4 448 aa19.37■□□□□ 0.69
UFD1-202ENST00000399523 PCDHB6Q9Y5E3 794 aa19.37■□□□□ 0.69
UFD1-202ENST00000399523 KALRNO60229 2985 aa19.37■□□□□ 0.69
UFD1-202ENST00000399523 PTPRBP23467 1997 aa19.37■□□□□ 0.69
UFD1-202ENST00000399523 TCRBV21S2A2A0A5A6 115 aa19.36■□□□□ 0.69
UFD1-202ENST00000399523 LEFTY2O00292 366 aa19.36■□□□□ 0.69
UFD1-202ENST00000399523 APODP05090 189 aa19.36■□□□□ 0.69
UFD1-202ENST00000399523 SYPP08247 313 aa19.36■□□□□ 0.69
UFD1-202ENST00000399523 PLA2G4BP0C869 781 aa19.36■□□□□ 0.69
UFD1-202ENST00000399523 TNFRSF4P43489 277 aa19.36■□□□□ 0.69
UFD1-202ENST00000399523 POU5F1Q01860 360 aaKnown RBP19.36■□□□□ 0.69
UFD1-202ENST00000399523 RPL6Q02878 288 aaKnown RBP19.36■□□□□ 0.69
UFD1-202ENST00000399523 ZNF33AQ06730 810 aa19.36■□□□□ 0.69
UFD1-202ENST00000399523 DHCR24Q15392 516 aa19.36■□□□□ 0.69
UFD1-202ENST00000399523 DTHD1Q6ZMT9 781 aa19.36■□□□□ 0.69
UFD1-202ENST00000399523 PGBD3Q8N328 593 aa19.36■□□□□ 0.69
UFD1-202ENST00000399523 GLIS3Q8NEA6 775 aa19.36■□□□□ 0.69
UFD1-202ENST00000399523 MDM1Q8TC05 714 aa19.36■□□□□ 0.69
UFD1-202ENST00000399523 CACNA2D2Q9NY47 1150 aa19.36■□□□□ 0.69
UFD1-202ENST00000399523 ODF2LQ9ULJ1 636 aa19.36■□□□□ 0.69
UFD1-202ENST00000399523 RAXQ9Y2V3 346 aa19.36■□□□□ 0.69
UFD1-202ENST00000399523 PCDHB9Q9Y5E1 797 aa19.36■□□□□ 0.69
UFD1-202ENST00000399523 A0A1W2PQD8 194 aa19.35■□□□□ 0.69
UFD1-202ENST00000399523 PNPLA4P41247 253 aa19.35■□□□□ 0.69
UFD1-202ENST00000399523 GRIA2P42262 883 aa19.35■□□□□ 0.69
UFD1-202ENST00000399523 ZRSR1Q15695 479 aaKnown RBP19.35■□□□□ 0.69
UFD1-202ENST00000399523 FILIP1Q7Z7B0 1213 aa19.35■□□□□ 0.69
UFD1-202ENST00000399523 DEFB119Q8N690 84 aa19.35■□□□□ 0.69
UFD1-202ENST00000399523 PNPLA1Q8N8W4 532 aa19.35■□□□□ 0.69
UFD1-202ENST00000399523 FUBP3Q96I24 572 aaKnown RBP eCLIP19.35■□□□□ 0.69
UFD1-202ENST00000399523 LRIG1Q96JA1 1093 aa19.35■□□□□ 0.69
UFD1-202ENST00000399523 ZNF560Q96MR9 790 aa19.35■□□□□ 0.69
UFD1-202ENST00000399523 DDX43Q9NXZ2 648 aaKnown RBP19.35■□□□□ 0.69
UFD1-202ENST00000399523 DKK4Q9UBT3 224 aa19.35■□□□□ 0.69
UFD1-202ENST00000399523 GTF3C4Q9UKN8 822 aa19.35■□□□□ 0.69
UFD1-202ENST00000399523 L1RE1Q9UN81 338 aa19.35■□□□□ 0.69
UFD1-202ENST00000399523 KNL1Q8NG31 2342 aa19.34■□□□□ 0.69
UFD1-202ENST00000399523 EIF4E1BA6NMX2 242 aaKnown RBP19.34■□□□□ 0.69
UFD1-202ENST00000399523 ACAT1P24752 427 aaKnown RBP19.34■□□□□ 0.69
UFD1-202ENST00000399523 MAGEA11P43364 429 aa19.34■□□□□ 0.69
UFD1-202ENST00000399523 SLC7A9P82251 487 aa19.34■□□□□ 0.69
UFD1-202ENST00000399523 ATP2C1P98194 919 aaPredicted RBP19.34■□□□□ 0.69
UFD1-202ENST00000399523 GNL2Q13823 731 aaKnown RBP19.34■□□□□ 0.69
UFD1-202ENST00000399523 RHBDF2Q6PJF5 856 aa19.34■□□□□ 0.69
UFD1-202ENST00000399523 GLRX5Q86SX6 157 aa19.34■□□□□ 0.69
UFD1-202ENST00000399523 C12orf40Q86WS4 652 aa19.34■□□□□ 0.69
UFD1-202ENST00000399523 ADAM32Q8TC27 787 aa19.34■□□□□ 0.69
UFD1-202ENST00000399523 KCNV2Q8TDN2 545 aa19.34■□□□□ 0.69
UFD1-202ENST00000399523 ARHGEF4Q9NR80 690 aa19.34■□□□□ 0.69
UFD1-202ENST00000399523 STYXL1Q9Y6J8 313 aa19.34■□□□□ 0.69
UFD1-202ENST00000399523 KNTC1P50748 2209 aa19.34■□□□□ 0.69
UFD1-202ENST00000399523 ANKRD63C9JTQ0 380 aa19.33■□□□□ 0.68
UFD1-202ENST00000399523 K7ENM7 598 aa19.33■□□□□ 0.68
UFD1-202ENST00000399523 SLC9A3R1O14745 358 aaPredicted RBP19.33■□□□□ 0.68
UFD1-202ENST00000399523 ZNF131P52739 623 aa19.33■□□□□ 0.68
UFD1-202ENST00000399523 MYL7Q01449 175 aa19.33■□□□□ 0.68
UFD1-202ENST00000399523 RESTQ13127 1097 aa19.33■□□□□ 0.68
UFD1-202ENST00000399523 CCDC142Q17RM4 750 aa19.33■□□□□ 0.68
UFD1-202ENST00000399523 NT5DC4Q86YG4 428 aa19.33■□□□□ 0.68
UFD1-202ENST00000399523 SPATA2LQ8IUW3 424 aaPredicted RBP19.33■□□□□ 0.68
UFD1-202ENST00000399523 SLC41A1Q8IVJ1 513 aa19.33■□□□□ 0.68
UFD1-202ENST00000399523 NAXDQ8IW45 347 aa19.33■□□□□ 0.68
UFD1-202ENST00000399523 SCN4BQ8IWT1 228 aa19.33■□□□□ 0.68
UFD1-202ENST00000399523 TMEM86AQ8N2M4 240 aa19.33■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms