RNA–Protein interactions for RNA: ENST00000399002.6

SPTLC3-201, Transcript of serine palmitoyltransferase long chain base subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC3, Length 6,169 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC3-201ENST00000399002 ATXN2LQ8WWM7 1075 aaKnown RBP8.67□□□□□ -1.02
SPTLC3-201ENST00000399002 LRRIQ1Q96JM4 1722 aa8.67□□□□□ -1.02
SPTLC3-201ENST00000399002 ITGA11Q9UKX5 1188 aa8.67□□□□□ -1.02
SPTLC3-201ENST00000399002 CAB39Q9Y376 341 aaPredicted RBP8.67□□□□□ -1.02
SPTLC3-201ENST00000399002 F5H423 210 aaPredicted RBP8.67□□□□□ -1.02
SPTLC3-201ENST00000399002 GPR182O15218 404 aa8.67□□□□□ -1.02
SPTLC3-201ENST00000399002 SLC9A1P19634 815 aa8.67□□□□□ -1.02
SPTLC3-201ENST00000399002 PTPAQ15257 358 aa8.67□□□□□ -1.02
SPTLC3-201ENST00000399002 TRIP10Q15642 601 aa8.67□□□□□ -1.02
SPTLC3-201ENST00000399002 CLEC16AQ2KHT3 1053 aa8.67□□□□□ -1.02
SPTLC3-201ENST00000399002 HERC6Q8IVU3 1022 aa8.67□□□□□ -1.02
SPTLC3-201ENST00000399002 ZFYVE19Q96K21 471 aa8.67□□□□□ -1.02
SPTLC3-201ENST00000399002 DDX28Q9NUL7 540 aaKnown RBP8.67□□□□□ -1.02
SPTLC3-201ENST00000399002 CTNNAL1Q9UBT7 734 aa8.67□□□□□ -1.02
SPTLC3-201ENST00000399002 CLCA2Q9UQC9 943 aa8.67□□□□□ -1.02
SPTLC3-201ENST00000399002 SPATA31A1Q5TZJ5 1347 aa8.67□□□□□ -1.02
SPTLC3-201ENST00000399002 HACD1B0YJ81 288 aa8.67□□□□□ -1.02
SPTLC3-201ENST00000399002 VPS26AO75436 327 aa8.67□□□□□ -1.02
SPTLC3-201ENST00000399002 RRM2P31350 389 aa8.67□□□□□ -1.02
SPTLC3-201ENST00000399002 BCAT1P54687 386 aa8.67□□□□□ -1.02
SPTLC3-201ENST00000399002 GLB1LQ6UWU2 654 aa8.67□□□□□ -1.02
SPTLC3-201ENST00000399002 BNC2Q6ZN30 1099 aaPredicted RBP8.67□□□□□ -1.02
SPTLC3-201ENST00000399002 NT5DC4Q86YG4 428 aa8.67□□□□□ -1.02
SPTLC3-201ENST00000399002 MAML3Q96JK9 1138 aa8.67□□□□□ -1.02
SPTLC3-201ENST00000399002 ZNF333Q96JL9 665 aa8.67□□□□□ -1.02
SPTLC3-201ENST00000399002 GJD4Q96KN9 370 aaPredicted RBP8.67□□□□□ -1.02
SPTLC3-201ENST00000399002 KLHL4Q9C0H6 718 aa8.67□□□□□ -1.02
SPTLC3-201ENST00000399002 STMN3Q9NZ72 180 aa8.67□□□□□ -1.02
SPTLC3-201ENST00000399002 RABGEF1Q9UJ41 708 aa8.67□□□□□ -1.02
SPTLC3-201ENST00000399002 HACL1Q9UJ83 578 aa8.67□□□□□ -1.02
SPTLC3-201ENST00000399002 PCDHB7Q9Y5E2 793 aa8.67□□□□□ -1.02
SPTLC3-201ENST00000399002 SPACA6W5XKT8 324 aa8.67□□□□□ -1.02
SPTLC3-201ENST00000399002 ARHGAP23Q9P227 1491 aa8.67□□□□□ -1.02
SPTLC3-201ENST00000399002 SRRM3A6NNA2 597 aaPredicted RBP8.66□□□□□ -1.02
SPTLC3-201ENST00000399002 OGTO15294 1046 aa8.66□□□□□ -1.02
SPTLC3-201ENST00000399002 STAG3L1P0CL83 205 aa8.66□□□□□ -1.02
SPTLC3-201ENST00000399002 MLNP12872 115 aa8.66□□□□□ -1.02
SPTLC3-201ENST00000399002 RANBP1P43487 201 aa8.66□□□□□ -1.02
SPTLC3-201ENST00000399002 OXCT1P55809 520 aa8.66□□□□□ -1.02
SPTLC3-201ENST00000399002 DEPDC1Q5TB30 811 aa8.66□□□□□ -1.02
SPTLC3-201ENST00000399002 SDE2Q6IQ49 451 aa8.66□□□□□ -1.02
SPTLC3-201ENST00000399002 TTC33Q6PID6 262 aaPredicted RBP8.66□□□□□ -1.02
SPTLC3-201ENST00000399002 P3H2Q8IVL5 708 aa8.66□□□□□ -1.02
SPTLC3-201ENST00000399002 GPRC5AQ8NFJ5 357 aa8.66□□□□□ -1.02
SPTLC3-201ENST00000399002 VPS33AQ96AX1 596 aa8.66□□□□□ -1.02
SPTLC3-201ENST00000399002 WNK4Q96J92 1243 aa8.66□□□□□ -1.02
SPTLC3-201ENST00000399002 VCPIP1Q96JH7 1222 aa8.66□□□□□ -1.02
SPTLC3-201ENST00000399002 CNDP1Q96KN2 507 aa8.66□□□□□ -1.02
SPTLC3-201ENST00000399002 ASB2Q96Q27 587 aa8.66□□□□□ -1.02
SPTLC3-201ENST00000399002 SYTL2Q9HCH5 934 aa8.66□□□□□ -1.02
SPTLC3-201ENST00000399002 KCNH7Q9NS40 1196 aa8.66□□□□□ -1.02
SPTLC3-201ENST00000399002 SLC25A13Q9UJS0 675 aa8.66□□□□□ -1.02
SPTLC3-201ENST00000399002 SESN1Q9Y6P5 492 aa8.66□□□□□ -1.02
SPTLC3-201ENST00000399002 AIM2O14862 343 aa8.66□□□□□ -1.02
SPTLC3-201ENST00000399002 CRTAMO95727 393 aa8.66□□□□□ -1.02
SPTLC3-201ENST00000399002 LHX1P48742 406 aa8.66□□□□□ -1.02
SPTLC3-201ENST00000399002 PEX5P50542 639 aa8.66□□□□□ -1.02
SPTLC3-201ENST00000399002 C1QBPQ07021 282 aaKnown RBP8.66□□□□□ -1.02
SPTLC3-201ENST00000399002 MICALL2Q8IY33 904 aa8.66□□□□□ -1.02
SPTLC3-201ENST00000399002 FAM71DQ8N9W8 422 aa8.66□□□□□ -1.02
SPTLC3-201ENST00000399002 SLC20A1Q8WUM9 679 aa8.66□□□□□ -1.02
SPTLC3-201ENST00000399002 POP5Q969H6 163 aaKnown RBP8.66□□□□□ -1.02
SPTLC3-201ENST00000399002 ATXN7L3BQ96GX2 97 aa8.66□□□□□ -1.02
SPTLC3-201ENST00000399002 ZFP42Q96MM3 310 aa8.66□□□□□ -1.02
SPTLC3-201ENST00000399002 RXFP1Q9HBX9 757 aa8.66□□□□□ -1.02
SPTLC3-201ENST00000399002 TRPC7Q9HCX4 862 aa8.66□□□□□ -1.02
SPTLC3-201ENST00000399002 SYBUQ9NX95 663 aa8.66□□□□□ -1.02
SPTLC3-201ENST00000399002 RNF112Q9ULX5 631 aa8.66□□□□□ -1.02
SPTLC3-201ENST00000399002 MSH4O15457 936 aa8.66□□□□□ -1.02
SPTLC3-201ENST00000399002 CYTH3O43739 400 aa8.66□□□□□ -1.02
SPTLC3-201ENST00000399002 FKBP9O95302 570 aa8.66□□□□□ -1.02
SPTLC3-201ENST00000399002 PPP3CCP48454 512 aa8.66□□□□□ -1.02
SPTLC3-201ENST00000399002 RGS7P49802 495 aa8.66□□□□□ -1.02
SPTLC3-201ENST00000399002 PLOD1Q02809 727 aaPredicted RBP8.66□□□□□ -1.02
SPTLC3-201ENST00000399002 SPANXN3Q5MJ09 141 aa8.66□□□□□ -1.02
SPTLC3-201ENST00000399002 PRR5LQ6MZQ0 368 aa8.66□□□□□ -1.02
SPTLC3-201ENST00000399002 FKBP9P1Q75LS8 142 aa8.66□□□□□ -1.02
SPTLC3-201ENST00000399002 SCUBE1Q8IWY4 988 aa8.66□□□□□ -1.02
SPTLC3-201ENST00000399002 NUP93Q8N1F7 819 aa8.66□□□□□ -1.02
SPTLC3-201ENST00000399002 C1orf131Q8NDD1 294 aaKnown RBP8.66□□□□□ -1.02
SPTLC3-201ENST00000399002 STARD8Q92502 1023 aa8.66□□□□□ -1.02
SPTLC3-201ENST00000399002 DCCP43146 1447 aa8.66□□□□□ -1.02
SPTLC3-201ENST00000399002 SEC24DO94855 1032 aaPredicted RBP8.66□□□□□ -1.02
SPTLC3-201ENST00000399002 KLRC1P26715 233 aa8.66□□□□□ -1.02
SPTLC3-201ENST00000399002 SLC29A2Q14542 456 aa8.66□□□□□ -1.02
SPTLC3-201ENST00000399002 ACAP1Q15027 740 aa8.66□□□□□ -1.02
SPTLC3-201ENST00000399002 LMBRD2Q68DH5 695 aaPredicted RBP8.66□□□□□ -1.02
SPTLC3-201ENST00000399002 PLEKHM3Q6ZWE6 761 aa8.66□□□□□ -1.02
SPTLC3-201ENST00000399002 SH2D3CQ8N5H7 860 aa8.66□□□□□ -1.02
SPTLC3-201ENST00000399002 SLITRK1Q96PX8 696 aa8.66□□□□□ -1.02
SPTLC3-201ENST00000399002 CAMKK2Q96RR4 588 aa8.66□□□□□ -1.02
SPTLC3-201ENST00000399002 SRPK1Q96SB4 655 aaKnown RBP8.66□□□□□ -1.02
SPTLC3-201ENST00000399002 STAU2Q9NUL3 570 aaKnown RBP eCLIP8.66□□□□□ -1.02
SPTLC3-201ENST00000399002 STK39Q9UEW8 545 aa8.66□□□□□ -1.02
SPTLC3-201ENST00000399002 NPTXRO95502 500 aa8.66□□□□□ -1.02
SPTLC3-201ENST00000399002 RBP3P10745 1247 aa8.66□□□□□ -1.02
SPTLC3-201ENST00000399002 H2AFXP16104 143 aaPredicted RBP8.66□□□□□ -1.02
SPTLC3-201ENST00000399002 TSHRP16473 764 aa8.66□□□□□ -1.02
SPTLC3-201ENST00000399002 HOXB8P17481 243 aaPredicted RBP8.66□□□□□ -1.02
SPTLC3-201ENST00000399002 VCLP18206 1134 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms