RNA–Protein interactions for RNA: ENST00000398431.2

TFF3-202, Transcript of trefoil factor 3, humanhuman

TSL 3

Gene TFF3, Length 452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFF3-202ENST00000398431 PSMD2Q13200 908 aa12.87□□□□□ -0.35
TFF3-202ENST00000398431 ALCAMQ13740 583 aa12.87□□□□□ -0.35
TFF3-202ENST00000398431 SLC39A14Q15043 492 aa12.87□□□□□ -0.35
TFF3-202ENST00000398431 VSTM1Q6UX27 236 aa12.87□□□□□ -0.35
TFF3-202ENST00000398431 CCDC73Q6ZRK6 1079 aa12.87□□□□□ -0.35
TFF3-202ENST00000398431 RASSF3Q86WH2 238 aa12.87□□□□□ -0.35
TFF3-202ENST00000398431 SFTPA1Q8IWL2 248 aa12.87□□□□□ -0.35
TFF3-202ENST00000398431 FSIP1Q8NA03 581 aa12.87□□□□□ -0.35
TFF3-202ENST00000398431 EXOC4Q96A65 974 aa12.87□□□□□ -0.35
TFF3-202ENST00000398431 USP28Q96RU2 1077 aa12.87□□□□□ -0.35
TFF3-202ENST00000398431 TTLL2Q9BWV7 592 aa12.87□□□□□ -0.35
TFF3-202ENST00000398431 TMEM30AQ9NV96 361 aa12.87□□□□□ -0.35
TFF3-202ENST00000398431 ANGPTL2Q9UKU9 493 aa12.87□□□□□ -0.35
TFF3-202ENST00000398431 THADAQ6YHU6 1953 aa12.87□□□□□ -0.35
TFF3-202ENST00000398431 HELZP42694 1942 aaKnown RBP12.86□□□□□ -0.35
TFF3-202ENST00000398431 ZNF840PA6NDX5 716 aa12.86□□□□□ -0.35
TFF3-202ENST00000398431 ZNF233A6NK53 670 aa12.86□□□□□ -0.35
TFF3-202ENST00000398431 OLFM2O95897 454 aa12.86□□□□□ -0.35
TFF3-202ENST00000398431 PFKLP17858 780 aa12.86□□□□□ -0.35
TFF3-202ENST00000398431 BCKDHBP21953 392 aa12.86□□□□□ -0.35
TFF3-202ENST00000398431 GRIK1P39086 918 aa12.86□□□□□ -0.35
TFF3-202ENST00000398431 SLC6A11P48066 632 aa12.86□□□□□ -0.35
TFF3-202ENST00000398431 DGKEP52429 567 aa12.86□□□□□ -0.35
TFF3-202ENST00000398431 CACNA2D1P54289 1103 aa12.86□□□□□ -0.35
TFF3-202ENST00000398431 SLC7A9P82251 487 aa12.86□□□□□ -0.35
TFF3-202ENST00000398431 CREB5Q02930 508 aa12.86□□□□□ -0.35
TFF3-202ENST00000398431 MYO1EQ12965 1108 aa12.86□□□□□ -0.35
TFF3-202ENST00000398431 KCNB1Q14721 858 aa12.86□□□□□ -0.35
TFF3-202ENST00000398431 DUOXA2Q1HG44 320 aa12.86□□□□□ -0.35
TFF3-202ENST00000398431 C2orf27AQ580R0 203 aa12.86□□□□□ -0.35
TFF3-202ENST00000398431 PMS2CLQ68D20 193 aa12.86□□□□□ -0.35
TFF3-202ENST00000398431 RNF43Q68DV7 783 aa12.86□□□□□ -0.35
TFF3-202ENST00000398431 C4orf50Q6ZRC1 276 aa12.86□□□□□ -0.35
TFF3-202ENST00000398431 DENND5BQ6ZUT9 1274 aa12.86□□□□□ -0.35
TFF3-202ENST00000398431 NOC3LQ8WTT2 800 aaKnown RBP12.86□□□□□ -0.35
TFF3-202ENST00000398431 ACDQ96AP0 544 aa12.86□□□□□ -0.35
TFF3-202ENST00000398431 PCED1BQ96HM7 432 aa12.86□□□□□ -0.35
TFF3-202ENST00000398431 ANKRD36BP1Q96IX9 119 aa12.86□□□□□ -0.35
TFF3-202ENST00000398431 CEP295NLQ96MC4 621 aa12.86□□□□□ -0.35
TFF3-202ENST00000398431 MRPL45Q9BRJ2 306 aaKnown RBP12.86□□□□□ -0.35
TFF3-202ENST00000398431 A0A0A0MRY4 1105 aa12.85□□□□□ -0.35
TFF3-202ENST00000398431 C4orf47A7E2U8 309 aa12.85□□□□□ -0.35
TFF3-202ENST00000398431 CDX4O14627 284 aaPredicted RBP12.85□□□□□ -0.35
TFF3-202ENST00000398431 GIPC1O14908 333 aa12.85□□□□□ -0.35
TFF3-202ENST00000398431 KIAA0391O15091 583 aaKnown RBP12.85□□□□□ -0.35
TFF3-202ENST00000398431 TGFB1I1O43294 461 aa12.85□□□□□ -0.35
TFF3-202ENST00000398431 CYP17A1P05093 508 aa12.85□□□□□ -0.35
TFF3-202ENST00000398431 FAM163BP0C2L3 166 aa12.85□□□□□ -0.35
TFF3-202ENST00000398431 TXLNAP40222 546 aa12.85□□□□□ -0.35
TFF3-202ENST00000398431 STAT6P42226 847 aa12.85□□□□□ -0.35
TFF3-202ENST00000398431 SEC13P55735 322 aa12.85□□□□□ -0.35
TFF3-202ENST00000398431 NOP14P78316 857 aaKnown RBP12.85□□□□□ -0.35
TFF3-202ENST00000398431 DHCR24Q15392 516 aa12.85□□□□□ -0.35
TFF3-202ENST00000398431 SURF1Q15526 300 aa12.85□□□□□ -0.35
TFF3-202ENST00000398431 ELF2Q15723 593 aa12.85□□□□□ -0.35
TFF3-202ENST00000398431 CRY1Q16526 586 aa12.85□□□□□ -0.35
TFF3-202ENST00000398431 EMC10Q5UCC4 262 aa12.85□□□□□ -0.35
TFF3-202ENST00000398431 RHBDF2Q6PJF5 856 aa12.85□□□□□ -0.35
TFF3-202ENST00000398431 TMEM92Q6UXU6 159 aa12.85□□□□□ -0.35
TFF3-202ENST00000398431 EPM2AIP1Q7L775 607 aaPredicted RBP12.85□□□□□ -0.35
TFF3-202ENST00000398431 TRAPPC11Q7Z392 1133 aa12.85□□□□□ -0.35
TFF3-202ENST00000398431 CCDC33Q8N5R6 958 aa12.85□□□□□ -0.35
TFF3-202ENST00000398431 PDILTQ8N807 584 aa12.85□□□□□ -0.35
TFF3-202ENST00000398431 TSTD1Q8NFU3 115 aa12.85□□□□□ -0.35
TFF3-202ENST00000398431 OLIG1Q8TAK6 271 aa12.85□□□□□ -0.35
TFF3-202ENST00000398431 MYCBPAPQ8TBZ2 947 aa12.85□□□□□ -0.35
TFF3-202ENST00000398431 ZNF507Q8TCN5 953 aa12.85□□□□□ -0.35
TFF3-202ENST00000398431 ZNF516Q92618 1163 aa12.85□□□□□ -0.35
TFF3-202ENST00000398431 C8orf48Q96LL4 319 aa12.85□□□□□ -0.35
TFF3-202ENST00000398431 TPSD1Q9BZJ3 242 aa12.85□□□□□ -0.35
TFF3-202ENST00000398431 GZF1Q9H116 711 aaPredicted RBP12.85□□□□□ -0.35
TFF3-202ENST00000398431 HSPBP1Q9NZL4 362 aa12.85□□□□□ -0.35
TFF3-202ENST00000398431 TRPM5Q9NZQ8 1165 aa12.85□□□□□ -0.35
TFF3-202ENST00000398431 MMP17Q9ULZ9 603 aa12.85□□□□□ -0.35
TFF3-202ENST00000398431 MTMR6Q9Y217 621 aa12.85□□□□□ -0.35
TFF3-202ENST00000398431 MYO18AQ92614 2054 aaKnown RBP12.85□□□□□ -0.35
TFF3-202ENST00000398431 GON4LQ3T8J9 2241 aa12.84□□□□□ -0.35
TFF3-202ENST00000398431 LNP1A1A4G5 178 aa12.84□□□□□ -0.35
TFF3-202ENST00000398431 PATE3B3GLJ2 98 aa12.84□□□□□ -0.35
TFF3-202ENST00000398431 F8VP50 259 aa12.84□□□□□ -0.35
TFF3-202ENST00000398431 TACC1O75410 805 aa12.84□□□□□ -0.35
TFF3-202ENST00000398431 NFATC1O95644 943 aa12.84□□□□□ -0.35
TFF3-202ENST00000398431 OAS1P00973 400 aaKnown RBP12.84□□□□□ -0.35
TFF3-202ENST00000398431 TNNC2P02585 160 aa12.84□□□□□ -0.35
TFF3-202ENST00000398431 PDCP20941 246 aa12.84□□□□□ -0.35
TFF3-202ENST00000398431 GNL1P36915 607 aaPredicted RBP12.84□□□□□ -0.35
TFF3-202ENST00000398431 CYP27A1Q02318 531 aa12.84□□□□□ -0.35
TFF3-202ENST00000398431 TAF10Q12962 218 aa12.84□□□□□ -0.35
TFF3-202ENST00000398431 MAPRE1Q15691 268 aaKnown RBP12.84□□□□□ -0.35
TFF3-202ENST00000398431 E2F4Q16254 413 aa12.84□□□□□ -0.35
TFF3-202ENST00000398431 USP39Q53GS9 565 aaKnown RBP12.84□□□□□ -0.35
TFF3-202ENST00000398431 PSAPL1Q6NUJ1 521 aa12.84□□□□□ -0.35
TFF3-202ENST00000398431 FILIP1Q7Z7B0 1213 aa12.84□□□□□ -0.35
TFF3-202ENST00000398431 WDR49Q8IV35 697 aa12.84□□□□□ -0.35
TFF3-202ENST00000398431 CCDC65Q8IXS2 484 aa12.84□□□□□ -0.35
TFF3-202ENST00000398431 FRMD1Q8N878 549 aa12.84□□□□□ -0.35
TFF3-202ENST00000398431 KIAA1958Q8N8K9 716 aa12.84□□□□□ -0.35
TFF3-202ENST00000398431 RDH13Q8NBN7 331 aa12.84□□□□□ -0.35
TFF3-202ENST00000398431 MDGA1Q8NFP4 955 aa12.84□□□□□ -0.35
TFF3-202ENST00000398431 CNOT6LQ96LI5 555 aaKnown RBP12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 163.4 ms