RNA–Protein interactions for RNA: ENST00000397906.6

TTC28-201, Transcript of tetratricopeptide repeat domain 28, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TTC28, Length 11,795 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-201ENST00000397906 NAB2Q15742 525 aa11.79□□□□□ -0.52
TTC28-201ENST00000397906 RIN2Q8WYP3 895 aaPredicted RBP11.79□□□□□ -0.52
TTC28-201ENST00000397906 TDRKHQ9Y2W6 561 aaKnown RBP11.79□□□□□ -0.52
TTC28-201ENST00000397906 DSG3P32926 999 aa11.78□□□□□ -0.52
TTC28-201ENST00000397906 LHX1P48742 406 aa11.78□□□□□ -0.52
TTC28-201ENST00000397906 TPGS1Q6ZTW0 290 aa11.78□□□□□ -0.52
TTC28-201ENST00000397906 FAM172AQ8WUF8 416 aa11.78□□□□□ -0.52
TTC28-201ENST00000397906 PPP1R2P1Q96PQ5 205 aa11.78□□□□□ -0.52
TTC28-201ENST00000397906 TNS2Q63HR2 1409 aa11.78□□□□□ -0.52
TTC28-201ENST00000397906 SCNN1BP51168 640 aa11.78□□□□□ -0.52
TTC28-201ENST00000397906 TKTL1P51854 596 aa11.78□□□□□ -0.52
TTC28-201ENST00000397906 CNTN2Q02246 1040 aa11.78□□□□□ -0.52
TTC28-201ENST00000397906 STAT4Q14765 748 aa11.78□□□□□ -0.52
TTC28-201ENST00000397906 PPM1LQ5SGD2 360 aa11.78□□□□□ -0.52
TTC28-201ENST00000397906 TEDDM1Q5T9Z0 273 aa11.78□□□□□ -0.52
TTC28-201ENST00000397906 ST13P4Q8IZP2 240 aaPredicted RBP11.78□□□□□ -0.52
TTC28-201ENST00000397906 OR9Q1Q8NGQ5 310 aa11.78□□□□□ -0.52
TTC28-201ENST00000397906 ETNK1Q9HBU6 452 aa11.78□□□□□ -0.52
TTC28-201ENST00000397906 AKAP10O43572 662 aa11.78□□□□□ -0.52
TTC28-201ENST00000397906 H2AFYO75367 372 aaKnown RBP11.78□□□□□ -0.52
TTC28-201ENST00000397906 IMPDH2P12268 514 aa11.78□□□□□ -0.52
TTC28-201ENST00000397906 BCAT1P54687 386 aa11.78□□□□□ -0.52
TTC28-201ENST00000397906 ATP6V1G3Q96LB4 118 aa11.78□□□□□ -0.52
TTC28-201ENST00000397906 CCDC3Q9BQI4 270 aa11.78□□□□□ -0.52
TTC28-201ENST00000397906 MRFAP1Q9Y605 127 aa11.78□□□□□ -0.52
TTC28-201ENST00000397906 SCAMP3O14828 347 aaKnown RBP11.78□□□□□ -0.52
TTC28-201ENST00000397906 SPRP35270 261 aaPredicted RBP11.78□□□□□ -0.52
TTC28-201ENST00000397906 DNERQ8NFT8 737 aa11.78□□□□□ -0.52
TTC28-201ENST00000397906 MED8Q96G25 268 aa11.78□□□□□ -0.52
TTC28-201ENST00000397906 MRPL1Q9BYD6 325 aaKnown RBP11.78□□□□□ -0.52
TTC28-201ENST00000397906 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.78□□□□□ -0.52
TTC28-201ENST00000397906 ITGA8P53708 1063 aa11.78□□□□□ -0.52
TTC28-201ENST00000397906 MYL6P60660 151 aa11.78□□□□□ -0.52
TTC28-201ENST00000397906 KLHDC7AQ5VTJ3 777 aa11.78□□□□□ -0.52
TTC28-201ENST00000397906 OR2W6PQ8NHA6 318 aa11.78□□□□□ -0.52
TTC28-201ENST00000397906 WNK4Q96J92 1243 aa11.78□□□□□ -0.52
TTC28-201ENST00000397906 CDYLQ9Y232 598 aa11.78□□□□□ -0.52
TTC28-201ENST00000397906 FGFR2P21802 821 aa11.78□□□□□ -0.52
TTC28-201ENST00000397906 METTL7BQ6UX53 244 aa11.78□□□□□ -0.52
TTC28-201ENST00000397906 C16orf59Q7L2K0 433 aa11.78□□□□□ -0.52
TTC28-201ENST00000397906 ICA1LQ8NDH6 482 aa11.78□□□□□ -0.52
TTC28-201ENST00000397906 CEP70Q8NHQ1 597 aa11.78□□□□□ -0.52
TTC28-201ENST00000397906 ALDH5A1P51649 535 aaPredicted RBP11.78□□□□□ -0.52
TTC28-201ENST00000397906 ACVR2BQ13705 512 aa11.78□□□□□ -0.52
TTC28-201ENST00000397906 OVOS1Q6IE37 1185 aa11.78□□□□□ -0.52
TTC28-201ENST00000397906 SNRPFP62306 86 aaKnown RBP11.78□□□□□ -0.52
TTC28-201ENST00000397906 ANKS6Q68DC2 871 aa11.78□□□□□ -0.52
TTC28-201ENST00000397906 LINC00523Q86TU6 105 aa11.78□□□□□ -0.52
TTC28-201ENST00000397906 NT5DC3Q86UY8 548 aa11.78□□□□□ -0.52
TTC28-201ENST00000397906 ZNF677Q86XU0 584 aa11.78□□□□□ -0.52
TTC28-201ENST00000397906 KCTD17Q8N5Z5 321 aa11.78□□□□□ -0.52
TTC28-201ENST00000397906 SOCS4Q8WXH5 440 aa11.78□□□□□ -0.52
TTC28-201ENST00000397906 FRMPD1Q5SYB0 1578 aa11.78□□□□□ -0.52
TTC28-201ENST00000397906 PTPRUQ92729 1446 aa11.78□□□□□ -0.52
TTC28-201ENST00000397906 A0A1B0GTH6 734 aa11.78□□□□□ -0.52
TTC28-201ENST00000397906 IL10P22301 178 aa11.78□□□□□ -0.52
TTC28-201ENST00000397906 CTCFP49711 727 aaPredicted RBP11.78□□□□□ -0.52
TTC28-201ENST00000397906 PLD1Q13393 1074 aa11.78□□□□□ -0.52
TTC28-201ENST00000397906 SYDE1Q6ZW31 735 aaPredicted RBP11.78□□□□□ -0.52
TTC28-201ENST00000397906 HORMAD1Q86X24 394 aa11.78□□□□□ -0.52
TTC28-201ENST00000397906 SYTL5Q8TDW5 730 aaPredicted RBP11.78□□□□□ -0.52
TTC28-201ENST00000397906 PREX1Q8TCU6 1659 aa11.77□□□□□ -0.52
TTC28-201ENST00000397906 CHI3L1P36222 383 aaPredicted RBP11.77□□□□□ -0.52
TTC28-201ENST00000397906 FXR1P51114 621 aaKnown RBP eCLIP11.77□□□□□ -0.52
TTC28-201ENST00000397906 ALDH6A1Q02252 535 aaKnown RBP11.77□□□□□ -0.52
TTC28-201ENST00000397906 FUT11Q495W5 492 aa11.77□□□□□ -0.52
TTC28-201ENST00000397906 FBXO47Q5MNV8 452 aa11.77□□□□□ -0.52
TTC28-201ENST00000397906 UNKQ9C0B0 810 aaKnown RBP11.77□□□□□ -0.52
TTC28-201ENST00000397906 UBXN8O00124 270 aa11.77□□□□□ -0.52
TTC28-201ENST00000397906 CCDC22O60826 627 aa11.77□□□□□ -0.52
TTC28-201ENST00000397906 SNCAIPQ9Y6H5 919 aa11.77□□□□□ -0.52
TTC28-201ENST00000397906 GMNCA6NCL1 334 aa11.77□□□□□ -0.52
TTC28-201ENST00000397906 ITGB6P18564 788 aa11.77□□□□□ -0.52
TTC28-201ENST00000397906 SGCGQ13326 291 aa11.77□□□□□ -0.52
TTC28-201ENST00000397906 STARD3Q14849 445 aa11.77□□□□□ -0.52
TTC28-201ENST00000397906 LRRC36Q1X8D7 754 aa11.77□□□□□ -0.52
TTC28-201ENST00000397906 DOK6Q6PKX4 331 aa11.77□□□□□ -0.52
TTC28-201ENST00000397906 SREBF1P36956 1147 aa11.77□□□□□ -0.53
TTC28-201ENST00000397906 STX3Q13277 289 aa11.77□□□□□ -0.53
TTC28-201ENST00000397906 HIC1Q14526 733 aa11.77□□□□□ -0.53
TTC28-201ENST00000397906 UGT3A1Q6NUS8 523 aa11.77□□□□□ -0.53
TTC28-201ENST00000397906 GMCL1Q96IK5 515 aa11.77□□□□□ -0.53
TTC28-201ENST00000397906 PLEKHA8Q96JA3 519 aa11.77□□□□□ -0.53
TTC28-201ENST00000397906 PON1P27169 355 aa11.77□□□□□ -0.53
TTC28-201ENST00000397906 TP53BP2Q13625 1128 aa11.77□□□□□ -0.53
TTC28-201ENST00000397906 FNDC3BQ53EP0 1204 aaKnown RBP11.77□□□□□ -0.53
TTC28-201ENST00000397906 USP50Q70EL3 339 aaPredicted RBP11.77□□□□□ -0.53
TTC28-201ENST00000397906 RBM23Q86U06 439 aaKnown RBP11.77□□□□□ -0.53
TTC28-201ENST00000397906 CEP41Q9BYV8 373 aa11.77□□□□□ -0.53
TTC28-201ENST00000397906 SNX12Q9UMY4 172 aa11.77□□□□□ -0.53
TTC28-201ENST00000397906 PGK1P00558 417 aa11.77□□□□□ -0.53
TTC28-201ENST00000397906 ABCE1P61221 599 aaKnown RBP11.77□□□□□ -0.53
TTC28-201ENST00000397906 RGL4Q8IZJ4 473 aa11.77□□□□□ -0.53
TTC28-201ENST00000397906 ADAM32Q8TC27 787 aa11.77□□□□□ -0.53
TTC28-201ENST00000397906 ANXA9O76027 345 aa11.77□□□□□ -0.53
TTC28-201ENST00000397906 GLRBP48167 497 aa11.77□□□□□ -0.53
TTC28-201ENST00000397906 APPL1Q9UKG1 709 aa11.77□□□□□ -0.53
TTC28-201ENST00000397906 ADCY3O60266 1144 aa11.77□□□□□ -0.53
TTC28-201ENST00000397906 MUTP22033 750 aa11.77□□□□□ -0.53
TTC28-201ENST00000397906 MTFR1Q15390 333 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms