RNA–Protein interactions for RNA: ENST00000397511.6

SSR1-202, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 5 BASIC

Gene SSR1, Length 3,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-202ENST00000397511 IZUMO3Q5VZ72 239 aa5.26□□□□□ -1.57
SSR1-202ENST00000397511 GRAMD4Q6IC98 578 aa5.26□□□□□ -1.57
SSR1-202ENST00000397511 DCUN1D2Q6PH85 259 aa5.26□□□□□ -1.57
SSR1-202ENST00000397511 C4orf50Q6ZRC1 276 aa5.26□□□□□ -1.57
SSR1-202ENST00000397511 MICALL2Q8IY33 904 aa5.26□□□□□ -1.57
SSR1-202ENST00000397511 THNSL1Q8IYQ7 743 aa5.26□□□□□ -1.57
SSR1-202ENST00000397511 RIBC1Q8N443 379 aaPredicted RBP5.26□□□□□ -1.57
SSR1-202ENST00000397511 PDCD7Q8N8D1 485 aaKnown RBP5.26□□□□□ -1.57
SSR1-202ENST00000397511 ANKLE1Q8NAG6 615 aa5.26□□□□□ -1.57
SSR1-202ENST00000397511 DEPTORQ8TB45 409 aa5.26□□□□□ -1.57
SSR1-202ENST00000397511 NRG4Q8WWG1 115 aa5.26□□□□□ -1.57
SSR1-202ENST00000397511 SNF8Q96H20 258 aa5.26□□□□□ -1.57
SSR1-202ENST00000397511 ABHD8Q96I13 439 aa5.26□□□□□ -1.57
SSR1-202ENST00000397511 MAGEB18Q96M61 343 aa5.26□□□□□ -1.57
SSR1-202ENST00000397511 TUBGCP5Q96RT8 1024 aa5.26□□□□□ -1.57
SSR1-202ENST00000397511 RBM15Q96T37 977 aaKnown RBP eCLIP5.26□□□□□ -1.574e-9■□□□□ 10.4
SSR1-202ENST00000397511 ROPN1BQ9BZX4 212 aaPredicted RBP5.26□□□□□ -1.57
SSR1-202ENST00000397511 MTMR12Q9C0I1 747 aa5.26□□□□□ -1.57
SSR1-202ENST00000397511 R3HDMLQ9H3Y0 253 aa5.26□□□□□ -1.57
SSR1-202ENST00000397511 VPS37BQ9H9H4 285 aa5.26□□□□□ -1.57
SSR1-202ENST00000397511 ROPN1Q9HAT0 212 aaPredicted RBP5.26□□□□□ -1.57
SSR1-202ENST00000397511 SAYSD1Q9NPB0 183 aa5.26□□□□□ -1.57
SSR1-202ENST00000397511 RNF19AQ9NV58 838 aa5.26□□□□□ -1.57
SSR1-202ENST00000397511 NKIRAS1Q9NYS0 192 aa5.26□□□□□ -1.57
SSR1-202ENST00000397511 PTTG2Q9NZH5 202 aa5.26□□□□□ -1.57
SSR1-202ENST00000397511 SLC9A2Q9UBY0 812 aa5.26□□□□□ -1.57
SSR1-202ENST00000397511 PARP2Q9UGN5 583 aa5.26□□□□□ -1.57
SSR1-202ENST00000397511 LNPEPQ9UIQ6 1025 aa5.26□□□□□ -1.57
SSR1-202ENST00000397511 ANGPTL2Q9UKU9 493 aa5.26□□□□□ -1.57
SSR1-202ENST00000397511 SBDSQ9Y3A5 250 aaKnown RBP eCLIP5.26□□□□□ -1.57
SSR1-202ENST00000397511 MYPNQ86TC9 1320 aa5.26□□□□□ -1.57
SSR1-202ENST00000397511 C10orf71Q711Q0 1435 aa5.26□□□□□ -1.57
SSR1-202ENST00000397511 TRIM43BA6NCK2 446 aa5.25□□□□□ -1.57
SSR1-202ENST00000397511 BTBD19C9JJ37 291 aa5.25□□□□□ -1.57
SSR1-202ENST00000397511 OPHN1O60890 802 aa5.25□□□□□ -1.57
SSR1-202ENST00000397511 PSMG1O95456 288 aa5.25□□□□□ -1.57
SSR1-202ENST00000397511 VNN1O95497 513 aa5.25□□□□□ -1.57
SSR1-202ENST00000397511 ASMTLO95671 621 aa5.25□□□□□ -1.57
SSR1-202ENST00000397511 GAS8O95995 478 aa5.25□□□□□ -1.57
SSR1-202ENST00000397511 FDX1P10109 184 aa5.25□□□□□ -1.57
SSR1-202ENST00000397511 KRT15P19012 456 aa5.25□□□□□ -1.57
SSR1-202ENST00000397511 CCND2P30279 289 aa5.25□□□□□ -1.57
SSR1-202ENST00000397511 GTF2H1P32780 548 aa5.25□□□□□ -1.57
SSR1-202ENST00000397511 RAP1GAPP47736 663 aa5.25□□□□□ -1.57
SSR1-202ENST00000397511 ERFP50548 548 aa5.25□□□□□ -1.57
SSR1-202ENST00000397511 GPS1Q13098 491 aa5.25□□□□□ -1.57
SSR1-202ENST00000397511 DNAJC3Q13217 504 aa5.25□□□□□ -1.57
SSR1-202ENST00000397511 MAMLD1Q13495 774 aa5.25□□□□□ -1.57
SSR1-202ENST00000397511 ITGA9Q13797 1035 aa5.25□□□□□ -1.57
SSR1-202ENST00000397511 EMC2Q15006 297 aa5.25□□□□□ -1.57
SSR1-202ENST00000397511 WDR72Q3MJ13 1102 aa5.25□□□□□ -1.57
SSR1-202ENST00000397511 TNFAIP8L3Q5GJ75 292 aa5.25□□□□□ -1.57
SSR1-202ENST00000397511 CIAPIN1Q6FI81 312 aa5.25□□□□□ -1.57
SSR1-202ENST00000397511 ARHGEF18Q6ZSZ5 1173 aa5.25□□□□□ -1.57
SSR1-202ENST00000397511 TMEM110Q86TL2 294 aa5.25□□□□□ -1.57
SSR1-202ENST00000397511 VSIG10LQ86VR7 867 aa5.25□□□□□ -1.57
SSR1-202ENST00000397511 ZBED8Q8IZ13 594 aa5.25□□□□□ -1.57
SSR1-202ENST00000397511 ANKRD35Q8N283 1001 aa5.25□□□□□ -1.57
SSR1-202ENST00000397511 CCDC33Q8N5R6 958 aa5.25□□□□□ -1.57
SSR1-202ENST00000397511 EMC1Q8N766 993 aa5.25□□□□□ -1.57
SSR1-202ENST00000397511 PPP1R13LQ8WUF5 828 aa5.25□□□□□ -1.57
SSR1-202ENST00000397511 TRAPPC12Q8WVT3 735 aa5.25□□□□□ -1.57
SSR1-202ENST00000397511 ATP6V0A1Q93050 837 aa5.25□□□□□ -1.57
SSR1-202ENST00000397511 SLC7A6OSQ96CW6 309 aaPredicted RBP5.25□□□□□ -1.57
SSR1-202ENST00000397511 RUNDC3BQ96NL0 473 aa5.25□□□□□ -1.57
SSR1-202ENST00000397511 PLVAPQ9BX97 442 aa5.25□□□□□ -1.57
SSR1-202ENST00000397511 OSBPL8Q9BZF1 889 aa5.25□□□□□ -1.57
SSR1-202ENST00000397511 SYNCQ9H7C4 482 aa5.25□□□□□ -1.57
SSR1-202ENST00000397511 SLCO1B3Q9NPD5 702 aa5.25□□□□□ -1.57
SSR1-202ENST00000397511 TBCCD1Q9NVR7 557 aa5.25□□□□□ -1.57
SSR1-202ENST00000397511 TUBA8Q9NY65 449 aaPredicted RBP5.25□□□□□ -1.57
SSR1-202ENST00000397511 NINJ2Q9NZG7 142 aa5.25□□□□□ -1.57
SSR1-202ENST00000397511 BTBD7Q9P203 1132 aa5.25□□□□□ -1.57
SSR1-202ENST00000397511 STX18Q9P2W9 335 aaKnown RBP5.25□□□□□ -1.57
SSR1-202ENST00000397511 UVRAGQ9P2Y5 699 aa5.25□□□□□ -1.57
SSR1-202ENST00000397511 PCSK1NQ9UHG2 260 aa5.25□□□□□ -1.57
SSR1-202ENST00000397511 NAALADL1Q9UQQ1 740 aa5.25□□□□□ -1.57
SSR1-202ENST00000397511 PCDHB2Q9Y5E7 798 aa5.25□□□□□ -1.57
SSR1-202ENST00000397511 IVNS1ABPQ9Y6Y0 642 aa5.25□□□□□ -1.57
SSR1-202ENST00000397511 TMEM247A6NEH6 219 aa5.25□□□□□ -1.57
SSR1-202ENST00000397511 SGK1O00141 431 aa5.25□□□□□ -1.57
SSR1-202ENST00000397511 P4HA2O15460 535 aa5.25□□□□□ -1.57
SSR1-202ENST00000397511 KRT36O76013 467 aa5.25□□□□□ -1.57
SSR1-202ENST00000397511 TTC4O95801 387 aa5.25□□□□□ -1.57
SSR1-202ENST00000397511 KRT1P04264 644 aa5.25□□□□□ -1.57
SSR1-202ENST00000397511 PSAPP07602 524 aa5.25□□□□□ -1.57
SSR1-202ENST00000397511 CD19P15391 556 aa5.25□□□□□ -1.57
SSR1-202ENST00000397511 KCNA2P16389 499 aa5.25□□□□□ -1.57
SSR1-202ENST00000397511 FUT4P22083 530 aa5.25□□□□□ -1.57
SSR1-202ENST00000397511 HOXD12P35452 270 aa5.25□□□□□ -1.57
SSR1-202ENST00000397511 ARSEP51690 589 aa5.25□□□□□ -1.57
SSR1-202ENST00000397511 MTTPP55157 894 aa5.25□□□□□ -1.57
SSR1-202ENST00000397511 CDH8P55286 799 aa5.25□□□□□ -1.57
SSR1-202ENST00000397511 CUL2Q13617 745 aa5.25□□□□□ -1.57
SSR1-202ENST00000397511 ALCAMQ13740 583 aa5.25□□□□□ -1.57
SSR1-202ENST00000397511 SPDYAQ5MJ70 313 aa5.25□□□□□ -1.57
SSR1-202ENST00000397511 TMEM63BQ5T3F8 832 aa5.25□□□□□ -1.57
SSR1-202ENST00000397511 VSTM1Q6UX27 236 aa5.25□□□□□ -1.57
SSR1-202ENST00000397511 MFSD7Q6UXD7 560 aa5.25□□□□□ -1.57
SSR1-202ENST00000397511 RTKN2Q8IZC4 609 aa5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms