RNA–Protein interactions for RNA: ENST00000396545.4

TNFSF13-205, Transcript of TNF superfamily member 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TNFSF13, Length 1,593 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13-205ENST00000396545 PTK2Q05397 1052 aa18.58■□□□□ 0.56
TNFSF13-205ENST00000396545 VARS2Q5ST30 1063 aaKnown RBP18.58■□□□□ 0.56
TNFSF13-205ENST00000396545 C10orf76Q5T2E6 689 aa18.58■□□□□ 0.56
TNFSF13-205ENST00000396545 BRSK2Q8IWQ3 736 aa18.58■□□□□ 0.56
TNFSF13-205ENST00000396545 RNF10Q8N5U6 811 aaKnown RBP18.58■□□□□ 0.56
TNFSF13-205ENST00000396545 ZNF461Q8TAF7 563 aa18.58■□□□□ 0.56
TNFSF13-205ENST00000396545 UBXN4Q92575 508 aa18.58■□□□□ 0.56
TNFSF13-205ENST00000396545 SHDQ96IW2 340 aa18.58■□□□□ 0.56
TNFSF13-205ENST00000396545 FAM81BQ96LP2 452 aa18.58■□□□□ 0.56
TNFSF13-205ENST00000396545 DDX23Q9BUQ8 820 aaKnown RBP18.58■□□□□ 0.56
TNFSF13-205ENST00000396545 GPR88Q9GZN0 384 aa18.58■□□□□ 0.56
TNFSF13-205ENST00000396545 RBAKQ9NYW8 714 aaPredicted RBP18.58■□□□□ 0.56
TNFSF13-205ENST00000396545 DNAJC12Q9UKB3 198 aa18.58■□□□□ 0.56
TNFSF13-205ENST00000396545 ARHGEF37A1IGU5 675 aa18.57■□□□□ 0.56
TNFSF13-205ENST00000396545 MACROD2A1Z1Q3 448 aa18.57■□□□□ 0.56
TNFSF13-205ENST00000396545 TBC1D4O60343 1298 aa18.57■□□□□ 0.56
TNFSF13-205ENST00000396545 TACC1O75410 805 aa18.57■□□□□ 0.56
TNFSF13-205ENST00000396545 GLULP15104 373 aa18.57■□□□□ 0.56
TNFSF13-205ENST00000396545 ARID5AQ03989 594 aa18.57■□□□□ 0.56
TNFSF13-205ENST00000396545 CRELD2Q6UXH1 353 aaPredicted RBP18.57■□□□□ 0.56
TNFSF13-205ENST00000396545 CCDC127Q96BQ5 260 aa18.57■□□□□ 0.56
TNFSF13-205ENST00000396545 ACAP3Q96P50 834 aa18.57■□□□□ 0.56
TNFSF13-205ENST00000396545 KXD1Q9BQD3 176 aa18.57■□□□□ 0.56
TNFSF13-205ENST00000396545 HAPLN2Q9GZV7 340 aa18.57■□□□□ 0.56
TNFSF13-205ENST00000396545 AVENQ9NQS1 362 aaPredicted RBP18.57■□□□□ 0.56
TNFSF13-205ENST00000396545 CAPN6Q9Y6Q1 641 aa18.57■□□□□ 0.56
TNFSF13-205ENST00000396545 CACNA1IQ9P0X4 2223 aa18.57■□□□□ 0.56
TNFSF13-205ENST00000396545 CITO14578 2027 aa18.57■□□□□ 0.56
TNFSF13-205ENST00000396545 CACNA1AO00555 2505 aa18.57■□□□□ 0.56
TNFSF13-205ENST00000396545 COL4A3Q01955 1670 aa18.57■□□□□ 0.56
TNFSF13-205ENST00000396545 LRRIQ3A6PVS8 624 aaPredicted RBP18.56■□□□□ 0.56
TNFSF13-205ENST00000396545 BTNL10A8MVZ5 291 aa18.56■□□□□ 0.56
TNFSF13-205ENST00000396545 SYN3O14994 580 aa18.56■□□□□ 0.56
TNFSF13-205ENST00000396545 FAM189A1O60320 539 aa18.56■□□□□ 0.56
TNFSF13-205ENST00000396545 ABLIM3O94929 683 aa18.56■□□□□ 0.56
TNFSF13-205ENST00000396545 ATP1A1P05023 1023 aaKnown RBP18.56■□□□□ 0.56
TNFSF13-205ENST00000396545 RHOP08100 348 aa18.56■□□□□ 0.56
TNFSF13-205ENST00000396545 DRAP1Q14919 205 aaPredicted RBP18.56■□□□□ 0.56
TNFSF13-205ENST00000396545 SLC5A9Q2M3M2 681 aa18.56■□□□□ 0.56
TNFSF13-205ENST00000396545 SMYD5Q6GMV2 418 aa18.56■□□□□ 0.56
TNFSF13-205ENST00000396545 C1orf210Q8IVY1 113 aa18.56■□□□□ 0.56
TNFSF13-205ENST00000396545 OLIG1Q8TAK6 271 aa18.56■□□□□ 0.56
TNFSF13-205ENST00000396545 ING5Q8WYH8 240 aa18.56■□□□□ 0.56
TNFSF13-205ENST00000396545 C18orf25Q96B23 403 aaPredicted RBP18.56■□□□□ 0.56
TNFSF13-205ENST00000396545 SEMA4AQ9H3S1 761 aa18.56■□□□□ 0.56
TNFSF13-205ENST00000396545 GDE1Q9NZC3 331 aa18.56■□□□□ 0.56
TNFSF13-205ENST00000396545 ADAMTS1Q9UHI8 967 aa18.56■□□□□ 0.56
TNFSF13-205ENST00000396545 MRPS23Q9Y3D9 190 aaKnown RBP18.56■□□□□ 0.56
TNFSF13-205ENST00000396545 OTOGLQ3ZCN5 2332 aa18.56■□□□□ 0.56
TNFSF13-205ENST00000396545 WDR27A2RRH5 827 aa18.55■□□□□ 0.56
TNFSF13-205ENST00000396545 RPL9P32969 192 aaKnown RBP18.55■□□□□ 0.56
TNFSF13-205ENST00000396545 GCLMP48507 274 aa18.55■□□□□ 0.56
TNFSF13-205ENST00000396545 ACOT2P49753 483 aa18.55■□□□□ 0.56
TNFSF13-205ENST00000396545 MRPL58Q14197 206 aaKnown RBP18.55■□□□□ 0.56
TNFSF13-205ENST00000396545 MLF2Q15773 248 aaPredicted RBP18.55■□□□□ 0.56
TNFSF13-205ENST00000396545 PDCL2Q8N4E4 241 aa18.55■□□□□ 0.56
TNFSF13-205ENST00000396545 GOLGA1Q92805 767 aa18.55■□□□□ 0.56
TNFSF13-205ENST00000396545 CGRRF1Q99675 332 aa18.55■□□□□ 0.56
TNFSF13-205ENST00000396545 SYT11Q9BT88 431 aa18.55■□□□□ 0.56
TNFSF13-205ENST00000396545 SALL4Q9UJQ4 1053 aa18.55■□□□□ 0.56
TNFSF13-205ENST00000396545 CPSF3Q9UKF6 684 aaKnown RBP18.55■□□□□ 0.56
TNFSF13-205ENST00000396545 JRKLQ9Y4A0 524 aa18.55■□□□□ 0.56
TNFSF13-205ENST00000396545 R4GN57 208 aa18.55■□□□□ 0.56
TNFSF13-205ENST00000396545 KANSL1LA0AUZ9 987 aa18.55■□□□□ 0.56
TNFSF13-205ENST00000396545 LRRN2O75325 713 aa18.55■□□□□ 0.56
TNFSF13-205ENST00000396545 IL18RAPO95256 599 aa18.55■□□□□ 0.56
TNFSF13-205ENST00000396545 MOCS3O95396 460 aa18.55■□□□□ 0.56
TNFSF13-205ENST00000396545 CLTAP09496 248 aa18.55■□□□□ 0.56
TNFSF13-205ENST00000396545 CCDC172P0C7W6 258 aa18.55■□□□□ 0.56
TNFSF13-205ENST00000396545 DLATP10515 647 aaKnown RBP18.55■□□□□ 0.56
TNFSF13-205ENST00000396545 ATF2P15336 505 aa18.55■□□□□ 0.56
TNFSF13-205ENST00000396545 H2AFXP16104 143 aaPredicted RBP18.55■□□□□ 0.56
TNFSF13-205ENST00000396545 TUBB4BP68371 445 aa18.55■□□□□ 0.56
TNFSF13-205ENST00000396545 PFKPQ01813 784 aa18.55■□□□□ 0.56
TNFSF13-205ENST00000396545 PRKCQQ04759 706 aa18.55■□□□□ 0.56
TNFSF13-205ENST00000396545 SLC44A4Q53GD3 710 aa18.55■□□□□ 0.56
TNFSF13-205ENST00000396545 POTEHQ6S545 545 aa18.55■□□□□ 0.56
TNFSF13-205ENST00000396545 TCEAL8Q8IYN2 117 aa18.55■□□□□ 0.56
TNFSF13-205ENST00000396545 FBXL13Q8NEE6 735 aa18.55■□□□□ 0.56
TNFSF13-205ENST00000396545 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18.55■□□□□ 0.56
TNFSF13-205ENST00000396545 SAR1BQ9Y6B6 198 aa18.55■□□□□ 0.56
TNFSF13-205ENST00000396545 PDCD11Q14690 1871 aaKnown RBP18.54■□□□□ 0.56
TNFSF13-205ENST00000396545 H7C4K7 107 aa18.54■□□□□ 0.56
TNFSF13-205ENST00000396545 ENC1O14682 589 aa18.54■□□□□ 0.56
TNFSF13-205ENST00000396545 ECI2O75521 394 aa18.54■□□□□ 0.56
TNFSF13-205ENST00000396545 LMNAP02545 664 aaKnown RBP18.54■□□□□ 0.56
TNFSF13-205ENST00000396545 SP9P0CG40 484 aa18.54■□□□□ 0.56
TNFSF13-205ENST00000396545 HARSP12081 509 aaKnown RBP18.54■□□□□ 0.56
TNFSF13-205ENST00000396545 PRLRP16471 622 aa18.54■□□□□ 0.56
TNFSF13-205ENST00000396545 TNNI1P19237 187 aa18.54■□□□□ 0.56
TNFSF13-205ENST00000396545 SLC10A6Q3KNW5 377 aa18.54■□□□□ 0.56
TNFSF13-205ENST00000396545 SV2AQ7L0J3 742 aa18.54■□□□□ 0.56
TNFSF13-205ENST00000396545 WDR49Q8IV35 697 aa18.54■□□□□ 0.56
TNFSF13-205ENST00000396545 SUSD3Q96L08 255 aa18.54■□□□□ 0.56
TNFSF13-205ENST00000396545 ALS2CR12Q96Q35 445 aa18.54■□□□□ 0.56
TNFSF13-205ENST00000396545 NAGPAQ9UK23 515 aa18.54■□□□□ 0.56
TNFSF13-205ENST00000396545 NUB1Q9Y5A7 615 aa18.54■□□□□ 0.56
TNFSF13-205ENST00000396545 FANCMQ8IYD8 2048 aa18.54■□□□□ 0.56
TNFSF13-205ENST00000396545 MIA3Q5JRA6 1907 aa18.54■□□□□ 0.56
TNFSF13-205ENST00000396545 GPR179Q6PRD1 2367 aa18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms