RNA–Protein interactions for RNA: ENST00000396352.8

HOXA3-202, Transcript of homeobox A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA3, Length 3,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA3-202ENST00000396352 CADM1Q9BY67 442 aaKnown RBP16.43■□□□□ 0.22
HOXA3-202ENST00000396352 METTL5Q9NRN9 209 aaKnown RBP16.43■□□□□ 0.22
HOXA3-202ENST00000396352 SMAPO00193 183 aa16.43■□□□□ 0.22
HOXA3-202ENST00000396352 MAFO75444 373 aaPredicted RBP16.43■□□□□ 0.22
HOXA3-202ENST00000396352 LUC7L3O95232 432 aaKnown RBP16.43■□□□□ 0.22
HOXA3-202ENST00000396352 ERBB2P04626 1255 aa16.43■□□□□ 0.22
HOXA3-202ENST00000396352 UBA1P22314 1058 aaKnown RBP16.43■□□□□ 0.22
HOXA3-202ENST00000396352 POLR2BP30876 1174 aaKnown RBP16.43■□□□□ 0.22
HOXA3-202ENST00000396352 RAP1GAPP47736 663 aa16.43■□□□□ 0.22
HOXA3-202ENST00000396352 EIF3EP60228 445 aaKnown RBP16.43■□□□□ 0.22
HOXA3-202ENST00000396352 PSMC1P62191 440 aaKnown RBP16.43■□□□□ 0.22
HOXA3-202ENST00000396352 BASP1P80723 227 aaKnown RBP16.43■□□□□ 0.22
HOXA3-202ENST00000396352 TFAMQ00059 246 aaKnown RBP16.43■□□□□ 0.22
HOXA3-202ENST00000396352 CNTN2Q02246 1040 aa16.43■□□□□ 0.22
HOXA3-202ENST00000396352 DPYSL3Q14195 570 aa16.43■□□□□ 0.22
HOXA3-202ENST00000396352 CDCA2Q69YH5 1023 aaPredicted RBP16.43■□□□□ 0.22
HOXA3-202ENST00000396352 CHSY1Q86X52 802 aa16.43■□□□□ 0.22
HOXA3-202ENST00000396352 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP16.43■□□□□ 0.22
HOXA3-202ENST00000396352 CMASQ8NFW8 434 aaPredicted RBP16.43■□□□□ 0.22
HOXA3-202ENST00000396352 SKA1Q96BD8 255 aa16.43■□□□□ 0.22
HOXA3-202ENST00000396352 CYTH2Q99418 400 aa16.43■□□□□ 0.22
HOXA3-202ENST00000396352 TSSK1BQ9BXA7 367 aa16.43■□□□□ 0.22
HOXA3-202ENST00000396352 ARL8BQ9NVJ2 186 aa16.43■□□□□ 0.22
HOXA3-202ENST00000396352 HEY2Q9UBP5 337 aa16.43■□□□□ 0.22
HOXA3-202ENST00000396352 A0A0G2JND7 137 aa16.43■□□□□ 0.22
HOXA3-202ENST00000396352 TCRBV9S1A1TA0A576 114 aa16.43■□□□□ 0.22
HOXA3-202ENST00000396352 LPXNO60711 386 aa16.43■□□□□ 0.22
HOXA3-202ENST00000396352 ELK3P41970 407 aa16.43■□□□□ 0.22
HOXA3-202ENST00000396352 PRKD1Q15139 912 aaPredicted RBP16.43■□□□□ 0.22
HOXA3-202ENST00000396352 RFX6Q8HWS3 928 aa16.43■□□□□ 0.22
HOXA3-202ENST00000396352 PRR11Q96HE9 360 aaPredicted RBP16.43■□□□□ 0.22
HOXA3-202ENST00000396352 TRIM55Q9BYV6 548 aa16.43■□□□□ 0.22
HOXA3-202ENST00000396352 AS3MTQ9HBK9 375 aa16.43■□□□□ 0.22
HOXA3-202ENST00000396352 PCSK1NQ9UHG2 260 aa16.43■□□□□ 0.22
HOXA3-202ENST00000396352 FZD1Q9UP38 647 aa16.43■□□□□ 0.22
HOXA3-202ENST00000396352 H0Y3Z8 333 aa16.42■□□□□ 0.22
HOXA3-202ENST00000396352 FARP2O94887 1054 aaPredicted RBP16.42■□□□□ 0.22
HOXA3-202ENST00000396352 PTDSS1P48651 473 aaKnown RBP16.42■□□□□ 0.22
HOXA3-202ENST00000396352 EFNA5P52803 228 aa16.42■□□□□ 0.22
HOXA3-202ENST00000396352 PTK7Q13308 1070 aa16.42■□□□□ 0.22
HOXA3-202ENST00000396352 C4orf50Q6ZRC1 276 aa16.42■□□□□ 0.22
HOXA3-202ENST00000396352 KCTD6Q8NC69 237 aa16.42■□□□□ 0.22
HOXA3-202ENST00000396352 APOPT1Q96IL0 206 aa16.42■□□□□ 0.22
HOXA3-202ENST00000396352 FAM167BQ9BTA0 163 aa16.42■□□□□ 0.22
HOXA3-202ENST00000396352 ZNF112Q9UJU3 913 aa16.42■□□□□ 0.22
HOXA3-202ENST00000396352 TEX264Q9Y6I9 313 aa16.42■□□□□ 0.22
HOXA3-202ENST00000396352 DNAJC6O75061 913 aa16.42■□□□□ 0.22
HOXA3-202ENST00000396352 MIPP30301 263 aa16.42■□□□□ 0.22
HOXA3-202ENST00000396352 SLC18A2Q05940 514 aa16.42■□□□□ 0.22
HOXA3-202ENST00000396352 KBTBD12Q3ZCT8 623 aa16.42■□□□□ 0.22
HOXA3-202ENST00000396352 CMPK2Q5EBM0 449 aa16.42■□□□□ 0.22
HOXA3-202ENST00000396352 CATSPERGQ6ZRH7 1159 aa16.42■□□□□ 0.22
HOXA3-202ENST00000396352 SLC44A1Q8WWI5 657 aa16.42■□□□□ 0.22
HOXA3-202ENST00000396352 PDGFDQ9GZP0 370 aaPredicted RBP16.42■□□□□ 0.22
HOXA3-202ENST00000396352 CNTN3Q9P232 1028 aa16.42■□□□□ 0.22
HOXA3-202ENST00000396352 CORO1CQ9ULV4 474 aaPredicted RBP16.42■□□□□ 0.22
HOXA3-202ENST00000396352 KBTBD13C9JR72 458 aa16.41■□□□□ 0.22
HOXA3-202ENST00000396352 HAUS5O94927 633 aa16.41■□□□□ 0.22
HOXA3-202ENST00000396352 MT-ND3P03897 115 aa16.41■□□□□ 0.22
HOXA3-202ENST00000396352 DLDP09622 509 aaKnown RBP16.41■□□□□ 0.22
HOXA3-202ENST00000396352 RBP3P10745 1247 aa16.41■□□□□ 0.22
HOXA3-202ENST00000396352 CD19P15391 556 aa16.41■□□□□ 0.22
HOXA3-202ENST00000396352 PSEN1P49768 467 aa16.41■□□□□ 0.22
HOXA3-202ENST00000396352 FBXO41Q8TF61 875 aa16.41■□□□□ 0.22
HOXA3-202ENST00000396352 FBXO6Q9NRD1 293 aaPredicted RBP16.41■□□□□ 0.22
HOXA3-202ENST00000396352 HACL1Q9UJ83 578 aa16.41■□□□□ 0.22
HOXA3-202ENST00000396352 TGDSO95455 350 aa16.41■□□□□ 0.22
HOXA3-202ENST00000396352 FAAP100Q0VG06 881 aa16.41■□□□□ 0.22
HOXA3-202ENST00000396352 KCNJ11Q14654 390 aa16.41■□□□□ 0.22
HOXA3-202ENST00000396352 NPNTQ6UXI9 565 aa16.41■□□□□ 0.22
HOXA3-202ENST00000396352 DNERQ8NFT8 737 aa16.41■□□□□ 0.22
HOXA3-202ENST00000396352 SPATA18Q8TC71 538 aa16.41■□□□□ 0.22
HOXA3-202ENST00000396352 HSPH1Q92598 858 aa16.41■□□□□ 0.22
HOXA3-202ENST00000396352 SPDL1Q96EA4 605 aa16.41■□□□□ 0.22
HOXA3-202ENST00000396352 FAM111AQ96PZ2 611 aa16.41■□□□□ 0.22
HOXA3-202ENST00000396352 PEBP4Q96S96 227 aa16.41■□□□□ 0.22
HOXA3-202ENST00000396352 BTBD10Q9BSF8 475 aa16.41■□□□□ 0.22
HOXA3-202ENST00000396352 TMEM120AQ9BXJ8 343 aa16.41■□□□□ 0.22
HOXA3-202ENST00000396352 NRBP2Q9NSY0 501 aa16.41■□□□□ 0.22
HOXA3-202ENST00000396352 NXF1Q9UBU9 619 aaKnown RBP16.41■□□□□ 0.22
HOXA3-202ENST00000396352 IQANK1A0A1B0GTG1 560 aa16.41■□□□□ 0.22
HOXA3-202ENST00000396352 CFAP69A5D8W1 941 aa16.41■□□□□ 0.22
HOXA3-202ENST00000396352 SPDYE16A6NNV3 312 aaPredicted RBP16.41■□□□□ 0.22
HOXA3-202ENST00000396352 MCF2LO15068 1137 aa16.41■□□□□ 0.22
HOXA3-202ENST00000396352 CCDC22O60826 627 aa16.41■□□□□ 0.22
HOXA3-202ENST00000396352 NEBLO76041 1014 aa16.41■□□□□ 0.22
HOXA3-202ENST00000396352 TRUB2O95900 331 aaKnown RBP16.41■□□□□ 0.22
HOXA3-202ENST00000396352 C1QAP02745 245 aa16.41■□□□□ 0.22
HOXA3-202ENST00000396352 PRKCBP05771 671 aa16.41■□□□□ 0.22
HOXA3-202ENST00000396352 SERPINB3P29508 390 aa16.41■□□□□ 0.22
HOXA3-202ENST00000396352 ORC1Q13415 861 aa16.41■□□□□ 0.22
HOXA3-202ENST00000396352 KHDC1Q4VXA5 237 aaKnown RBP16.41■□□□□ 0.22
HOXA3-202ENST00000396352 DSTYKQ6XUX3 929 aa16.41■□□□□ 0.22
HOXA3-202ENST00000396352 WRNIP1Q96S55 665 aa16.41■□□□□ 0.22
HOXA3-202ENST00000396352 BCO2Q9BYV7 579 aa16.41■□□□□ 0.22
HOXA3-202ENST00000396352 SDCBP2Q9H190 292 aa16.41■□□□□ 0.22
HOXA3-202ENST00000396352 DCLRE1BQ9H816 532 aa16.41■□□□□ 0.22
HOXA3-202ENST00000396352 A0A0G2JMZ2 1700 aa16.4■□□□□ 0.22
HOXA3-202ENST00000396352 LRRC37A2A6NM11 1700 aa16.4■□□□□ 0.22
HOXA3-202ENST00000396352 WDR90Q96KV7 1748 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms