RNA–Protein interactions for RNA: ENST00000394253.7

USP49-203, Transcript of ubiquitin specific peptidase 49, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP49, Length 9,034 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-203ENST00000394253 TXNDC11Q6PKC3 985 aa13.87□□□□□ -0.19
USP49-203ENST00000394253 CASZ1Q86V15 1759 aa13.87□□□□□ -0.19
USP49-203ENST00000394253 A0A0G2JPF8 293 aa13.87□□□□□ -0.19
USP49-203ENST00000394253 HNRNPCL3B7ZW38 293 aa13.87□□□□□ -0.19
USP49-203ENST00000394253 M0QYV0 167 aa13.87□□□□□ -0.19
USP49-203ENST00000394253 NDUFB5O43674 189 aa13.87□□□□□ -0.19
USP49-203ENST00000394253 HNRNPCL4P0DMR1 293 aa13.87□□□□□ -0.19
USP49-203ENST00000394253 LONRF1Q17RB8 773 aa13.87□□□□□ -0.19
USP49-203ENST00000394253 FAM81AQ8TBF8 368 aa13.87□□□□□ -0.19
USP49-203ENST00000394253 MYLPFQ96A32 169 aa13.87□□□□□ -0.19
USP49-203ENST00000394253 COX4I2Q96KJ9 171 aa13.87□□□□□ -0.19
USP49-203ENST00000394253 ZCCHC17Q9NP64 241 aaKnown RBP13.87□□□□□ -0.19
USP49-203ENST00000394253 TIMMDC1Q9NPL8 285 aa13.87□□□□□ -0.19
USP49-203ENST00000394253 ZNF112Q9UJU3 913 aa13.87□□□□□ -0.19
USP49-203ENST00000394253 RUVBL2Q9Y230 463 aaKnown RBP13.87□□□□□ -0.19
USP49-203ENST00000394253 OR6B1O95007 311 aa13.87□□□□□ -0.19
USP49-203ENST00000394253 NT5DC4Q86YG4 428 aa13.87□□□□□ -0.19
USP49-203ENST00000394253 RXFP1Q9HBX9 757 aa13.87□□□□□ -0.19
USP49-203ENST00000394253 STOX2Q9P2F5 926 aaPredicted RBP13.87□□□□□ -0.19
USP49-203ENST00000394253 ASB14A6NK59 587 aa13.87□□□□□ -0.19
USP49-203ENST00000394253 MYL4P12829 197 aa13.87□□□□□ -0.19
USP49-203ENST00000394253 GPC3P51654 580 aa13.87□□□□□ -0.19
USP49-203ENST00000394253 PTGES3Q15185 160 aaKnown RBP13.87□□□□□ -0.19
USP49-203ENST00000394253 GALNTL6Q49A17 601 aa13.87□□□□□ -0.19
USP49-203ENST00000394253 ZNF184Q99676 751 aaPredicted RBP13.87□□□□□ -0.19
USP49-203ENST00000394253 MAP3K20Q9NYL2 800 aaKnown RBP13.87□□□□□ -0.19
USP49-203ENST00000394253 HEATR9A2RTY3 570 aa13.87□□□□□ -0.19
USP49-203ENST00000394253 ZAP70P43403 619 aa13.87□□□□□ -0.19
USP49-203ENST00000394253 TWF1Q12792 350 aa13.87□□□□□ -0.19
USP49-203ENST00000394253 HAUS6Q7Z4H7 955 aa13.87□□□□□ -0.19
USP49-203ENST00000394253 RAB6BQ9NRW1 208 aa13.87□□□□□ -0.19
USP49-203ENST00000394253 DUSP12Q9UNI6 340 aa13.87□□□□□ -0.19
USP49-203ENST00000394253 POLR1DQ9Y2S0 133 aa13.87□□□□□ -0.19
USP49-203ENST00000394253 ARHGEF11O15085 1522 aa13.87□□□□□ -0.19
USP49-203ENST00000394253 SMIM22K7EJ46 135 aa13.87□□□□□ -0.19
USP49-203ENST00000394253 VBP1P61758 197 aa13.87□□□□□ -0.19
USP49-203ENST00000394253 FAM220AQ7Z4H9 259 aa13.87□□□□□ -0.19
USP49-203ENST00000394253 GAS2O43903 313 aaKnown RBP13.87□□□□□ -0.19
USP49-203ENST00000394253 VEPH1Q14D04 833 aa13.87□□□□□ -0.19
USP49-203ENST00000394253 TNFAIP8L3Q5GJ75 292 aa13.87□□□□□ -0.19
USP49-203ENST00000394253 RHOBTB2Q9BYZ6 727 aa13.87□□□□□ -0.19
USP49-203ENST00000394253 CARD8Q9Y2G2 431 aa13.87□□□□□ -0.19
USP49-203ENST00000394253 HBS1LQ9Y450 684 aaKnown RBP13.87□□□□□ -0.19
USP49-203ENST00000394253 SGO1Q5FBB7 561 aa13.86□□□□□ -0.19
USP49-203ENST00000394253 EXOC3L1Q86VI1 746 aa13.86□□□□□ -0.19
USP49-203ENST00000394253 LINC00301Q8NCQ3 95 aa13.86□□□□□ -0.19
USP49-203ENST00000394253 NUP50Q9UKX7 468 aa13.86□□□□□ -0.19
USP49-203ENST00000394253 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.86□□□□□ -0.19
USP49-203ENST00000394253 BARGINQ6ZT62 677 aa13.86□□□□□ -0.19
USP49-203ENST00000394253 OSCP1Q8WVF1 389 aa13.86□□□□□ -0.19
USP49-203ENST00000394253 RRN3Q9NYV6 651 aa13.86□□□□□ -0.19
USP49-203ENST00000394253 F5H423 210 aaPredicted RBP13.86□□□□□ -0.19
USP49-203ENST00000394253 PSME3P61289 254 aa13.86□□□□□ -0.19
USP49-203ENST00000394253 SPIRE1Q08AE8 756 aa13.86□□□□□ -0.19
USP49-203ENST00000394253 NEDD8Q15843 81 aa13.86□□□□□ -0.19
USP49-203ENST00000394253 PID1Q7Z2X4 250 aa13.86□□□□□ -0.19
USP49-203ENST00000394253 ANKMY2Q8IV38 441 aa13.86□□□□□ -0.19
USP49-203ENST00000394253 HS6ST3Q8IZP7 471 aa13.86□□□□□ -0.19
USP49-203ENST00000394253 SNX12Q9UMY4 172 aa13.86□□□□□ -0.19
USP49-203ENST00000394253 SAGE2PA6NJ88 616 aa13.86□□□□□ -0.19
USP49-203ENST00000394253 TPST1O60507 370 aa13.86□□□□□ -0.19
USP49-203ENST00000394253 TAF5LO75529 589 aa13.86□□□□□ -0.19
USP49-203ENST00000394253 CYBBP04839 570 aa13.86□□□□□ -0.19
USP49-203ENST00000394253 ATP5BP06576 529 aaKnown RBP13.86□□□□□ -0.19
USP49-203ENST00000394253 KCNJ6P48051 423 aa13.86□□□□□ -0.19
USP49-203ENST00000394253 ERMARDQ5T6L9 678 aa13.86□□□□□ -0.19
USP49-203ENST00000394253 ATG14Q6ZNE5 492 aa13.86□□□□□ -0.19
USP49-203ENST00000394253 PAK5Q9P286 719 aa13.86□□□□□ -0.19
USP49-203ENST00000394253 MGAT4DA6NG13 374 aa13.86□□□□□ -0.19
USP49-203ENST00000394253 ATP6AP1LQ52LC2 224 aa13.86□□□□□ -0.19
USP49-203ENST00000394253 SPATA18Q8TC71 538 aa13.86□□□□□ -0.19
USP49-203ENST00000394253 C1orf54Q8WWF1 131 aa13.86□□□□□ -0.19
USP49-203ENST00000394253 Q96MT0 163 aa13.86□□□□□ -0.19
USP49-203ENST00000394253 UBP1Q9NZI7 540 aa13.86□□□□□ -0.19
USP49-203ENST00000394253 DMRT2Q9Y5R5 561 aa13.86□□□□□ -0.19
USP49-203ENST00000394253 CDC16Q13042 620 aa13.86□□□□□ -0.19
USP49-203ENST00000394253 PTGISQ16647 500 aa13.86□□□□□ -0.19
USP49-203ENST00000394253 RC3H1Q5TC82 1133 aaKnown RBP13.86□□□□□ -0.19
USP49-203ENST00000394253 ZNF790Q6PG37 636 aa13.86□□□□□ -0.19
USP49-203ENST00000394253 LRRC74BQ6ZQY2 392 aa13.86□□□□□ -0.19
USP49-203ENST00000394253 CD2BP2O95400 341 aaKnown RBP13.86□□□□□ -0.19
USP49-203ENST00000394253 LYNP07948 512 aa13.86□□□□□ -0.19
USP49-203ENST00000394253 ERO1BQ86YB8 467 aa13.86□□□□□ -0.19
USP49-203ENST00000394253 UGT2B28Q9BY64 529 aa13.86□□□□□ -0.19
USP49-203ENST00000394253 MAGI1Q96QZ7 1491 aaPredicted RBP13.86□□□□□ -0.19
USP49-203ENST00000394253 CAPGP40121 348 aa13.85□□□□□ -0.19
USP49-203ENST00000394253 NR1D2Q14995 579 aa13.85□□□□□ -0.19
USP49-203ENST00000394253 TRPC4APQ8TEL6 797 aa13.85□□□□□ -0.19
USP49-203ENST00000394253 PCSK1NQ9UHG2 260 aa13.85□□□□□ -0.19
USP49-203ENST00000394253 LOC100506127A0A0U1RQW1 187 aa13.85□□□□□ -0.19
USP49-203ENST00000394253 DENND3A2RUS2 1198 aa13.85□□□□□ -0.19
USP49-203ENST00000394253 G3V2T6 193 aa13.85□□□□□ -0.19
USP49-203ENST00000394253 GPC1P35052 558 aa13.85□□□□□ -0.19
USP49-203ENST00000394253 VAMP7P51809 220 aa13.85□□□□□ -0.19
USP49-203ENST00000394253 KRT24Q2M2I5 525 aa13.85□□□□□ -0.19
USP49-203ENST00000394253 SLC27A3Q5K4L6 730 aa13.85□□□□□ -0.19
USP49-203ENST00000394253 FAM83BQ5T0W9 1011 aa13.85□□□□□ -0.19
USP49-203ENST00000394253 RPTNQ6XPR3 784 aa13.85□□□□□ -0.19
USP49-203ENST00000394253 MED15Q96RN5 788 aa13.85□□□□□ -0.19
USP49-203ENST00000394253 MIEF1Q9NQG6 463 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 128.6 ms