RNA–Protein interactions for RNA: ENST00000394114.2

CASC3-202, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 2

Gene CASC3, Length 2,792 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-202ENST00000394114 ARF4P18085 180 aaPredicted RBP6.25□□□□□ -1.41
CASC3-202ENST00000394114 PPM1FP49593 454 aaPredicted RBP6.25□□□□□ -1.41
CASC3-202ENST00000394114 CPT1AP50416 773 aa6.25□□□□□ -1.41
CASC3-202ENST00000394114 GPC3P51654 580 aa6.25□□□□□ -1.41
CASC3-202ENST00000394114 TERF1P54274 439 aa6.25□□□□□ -1.41
CASC3-202ENST00000394114 SPRED3Q2MJR0 410 aa6.25□□□□□ -1.41
CASC3-202ENST00000394114 ZACNQ401N2 412 aa6.25□□□□□ -1.41
CASC3-202ENST00000394114 ICE2Q659A1 982 aa6.25□□□□□ -1.41
CASC3-202ENST00000394114 C15orf39Q6ZRI6 1047 aa6.25□□□□□ -1.41
CASC3-202ENST00000394114 VPS36Q86VN1 386 aa6.25□□□□□ -1.41
CASC3-202ENST00000394114 BRSK2Q8IWQ3 736 aa6.25□□□□□ -1.41
CASC3-202ENST00000394114 MNS1Q8NEH6 495 aa6.25□□□□□ -1.41
CASC3-202ENST00000394114 DNAJB3Q8WWF6 145 aa6.25□□□□□ -1.41
CASC3-202ENST00000394114 KLHL6Q8WZ60 621 aa6.25□□□□□ -1.41
CASC3-202ENST00000394114 CAPZA3Q96KX2 299 aa6.25□□□□□ -1.41
CASC3-202ENST00000394114 TTC1Q99614 292 aa6.25□□□□□ -1.41
CASC3-202ENST00000394114 C1orf112Q9NSG2 853 aa6.25□□□□□ -1.41
CASC3-202ENST00000394114 TMEM39AQ9NV64 488 aa6.25□□□□□ -1.41
CASC3-202ENST00000394114 PRMT7Q9NVM4 692 aaPredicted RBP6.25□□□□□ -1.41
CASC3-202ENST00000394114 RNF186Q9NXI6 227 aa6.25□□□□□ -1.41
CASC3-202ENST00000394114 TAS2R14Q9NYV8 317 aa6.25□□□□□ -1.41
CASC3-202ENST00000394114 GPN3Q9UHW5 284 aaPredicted RBP6.25□□□□□ -1.41
CASC3-202ENST00000394114 COQ4Q9Y3A0 265 aa6.25□□□□□ -1.41
CASC3-202ENST00000394114 MRFAP1Q9Y605 127 aa6.25□□□□□ -1.41
CASC3-202ENST00000394114 COL1A2P08123 1366 aa6.25□□□□□ -1.41
CASC3-202ENST00000394114 ZEB2O60315 1214 aa6.25□□□□□ -1.41
CASC3-202ENST00000394114 CST3P01034 146 aaPredicted RBP6.25□□□□□ -1.41
CASC3-202ENST00000394114 AKR1A1P14550 325 aa6.25□□□□□ -1.41
CASC3-202ENST00000394114 TNFAIP3P21580 790 aa6.25□□□□□ -1.41
CASC3-202ENST00000394114 CXCR5P32302 372 aa6.25□□□□□ -1.41
CASC3-202ENST00000394114 NOP2P46087 812 aaKnown RBP6.25□□□□□ -1.41
CASC3-202ENST00000394114 MFAP3P55082 362 aa6.25□□□□□ -1.41
CASC3-202ENST00000394114 SATB1Q01826 763 aa6.25□□□□□ -1.41
CASC3-202ENST00000394114 ERCC6LQ2NKX8 1250 aa6.25□□□□□ -1.41
CASC3-202ENST00000394114 FAM47CQ5HY64 1035 aa6.25□□□□□ -1.41
CASC3-202ENST00000394114 WDR44Q5JSH3 913 aa6.25□□□□□ -1.41
CASC3-202ENST00000394114 LCE2DQ5TA82 110 aaPredicted RBP6.25□□□□□ -1.41
CASC3-202ENST00000394114 UNC5AQ6ZN44 842 aa6.25□□□□□ -1.41
CASC3-202ENST00000394114 SCUBE1Q8IWY4 988 aa6.25□□□□□ -1.41
CASC3-202ENST00000394114 OLIG1Q8TAK6 271 aa6.25□□□□□ -1.41
CASC3-202ENST00000394114 CGRRF1Q99675 332 aa6.25□□□□□ -1.41
CASC3-202ENST00000394114 TSGA10Q9BZW7 698 aa6.25□□□□□ -1.41
CASC3-202ENST00000394114 EPC1Q9H2F5 836 aa6.25□□□□□ -1.41
CASC3-202ENST00000394114 PDZD7Q9H5P4 517 aa6.25□□□□□ -1.41
CASC3-202ENST00000394114 APOBEC3GQ9HC16 384 aaKnown RBP6.25□□□□□ -1.41
CASC3-202ENST00000394114 CPSF3Q9UKF6 684 aaKnown RBP6.25□□□□□ -1.41
CASC3-202ENST00000394114 PNMA8BQ9ULN7 279 aaPredicted RBP6.25□□□□□ -1.41
CASC3-202ENST00000394114 PACSIN2Q9UNF0 486 aaPredicted RBP6.25□□□□□ -1.41
CASC3-202ENST00000394114 BZW2Q9Y6E2 419 aaKnown RBP6.25□□□□□ -1.41
CASC3-202ENST00000394114 TRAV20A0A0B4J274 112 aa6.24□□□□□ -1.41
CASC3-202ENST00000394114 METTL12A8MUP2 240 aa6.24□□□□□ -1.41
CASC3-202ENST00000394114 KIAA0391O15091 583 aaKnown RBP6.24□□□□□ -1.41
CASC3-202ENST00000394114 ZNF185O15231 689 aa6.24□□□□□ -1.41
CASC3-202ENST00000394114 PJA2O43164 708 aa6.24□□□□□ -1.41
CASC3-202ENST00000394114 TSPAN1O60635 241 aa6.24□□□□□ -1.41
CASC3-202ENST00000394114 TACC1O75410 805 aa6.24□□□□□ -1.41
CASC3-202ENST00000394114 FTCDO95954 541 aa6.24□□□□□ -1.41
CASC3-202ENST00000394114 KRT19P08727 400 aa6.24□□□□□ -1.41
CASC3-202ENST00000394114 TMEM191BP0C7N4 346 aa6.24□□□□□ -1.41
CASC3-202ENST00000394114 PROZP22891 400 aa6.24□□□□□ -1.41
CASC3-202ENST00000394114 CCND3P30281 292 aaPredicted RBP6.24□□□□□ -1.41
CASC3-202ENST00000394114 GTF2H1P32780 548 aa6.24□□□□□ -1.41
CASC3-202ENST00000394114 SP3Q02447 781 aa6.24□□□□□ -1.41
CASC3-202ENST00000394114 CACNB2Q08289 660 aaPredicted RBP6.24□□□□□ -1.41
CASC3-202ENST00000394114 NCBP1Q09161 790 aaKnown RBP6.24□□□□□ -1.41
CASC3-202ENST00000394114 ELF2Q15723 593 aa6.24□□□□□ -1.41
CASC3-202ENST00000394114 NAB2Q15742 525 aa6.24□□□□□ -1.41
CASC3-202ENST00000394114 MFSD14CQ5VZR4 134 aa6.24□□□□□ -1.41
CASC3-202ENST00000394114 KIAA1211LQ6NV74 962 aa6.24□□□□□ -1.41
CASC3-202ENST00000394114 SCARA5Q6ZMJ2 495 aa6.24□□□□□ -1.41
CASC3-202ENST00000394114 EFCAB13Q8IY85 973 aa6.24□□□□□ -1.41
CASC3-202ENST00000394114 SDR16C5Q8N3Y7 309 aa6.24□□□□□ -1.41
CASC3-202ENST00000394114 C7orf31Q8N865 590 aa6.24□□□□□ -1.41
CASC3-202ENST00000394114 CD99L2Q8TCZ2 262 aa6.24□□□□□ -1.41
CASC3-202ENST00000394114 AGPAT1Q99943 283 aa6.24□□□□□ -1.41
CASC3-202ENST00000394114 BHLHE41Q9C0J9 482 aaPredicted RBP6.24□□□□□ -1.41
CASC3-202ENST00000394114 CXCL16Q9H2A7 254 aa6.24□□□□□ -1.41
CASC3-202ENST00000394114 MYO1AQ9UBC5 1043 aa6.24□□□□□ -1.41
CASC3-202ENST00000394114 GTF2IRD1Q9UHL9 959 aa6.24□□□□□ -1.41
CASC3-202ENST00000394114 PCDHB10Q9UN67 800 aa6.24□□□□□ -1.41
CASC3-202ENST00000394114 TNFSF13BQ9Y275 285 aa6.24□□□□□ -1.41
CASC3-202ENST00000394114 HES2Q9Y543 173 aa6.24□□□□□ -1.41
CASC3-202ENST00000394114 NUB1Q9Y5A7 615 aa6.24□□□□□ -1.41
CASC3-202ENST00000394114 NRCAMQ92823 1304 aa6.24□□□□□ -1.41
CASC3-202ENST00000394114 RRN3P2A6NIE6 340 aa6.24□□□□□ -1.41
CASC3-202ENST00000394114 DYNC1I1O14576 645 aa6.24□□□□□ -1.41
CASC3-202ENST00000394114 PMM2O15305 246 aa6.24□□□□□ -1.41
CASC3-202ENST00000394114 MEFVO15553 781 aaPredicted RBP6.24□□□□□ -1.41
CASC3-202ENST00000394114 CTIFO43310 598 aaKnown RBP6.24□□□□□ -1.41
CASC3-202ENST00000394114 PALMO75781 387 aa6.24□□□□□ -1.41
CASC3-202ENST00000394114 ALDH1A1P00352 501 aa6.24□□□□□ -1.41
CASC3-202ENST00000394114 MMEP08473 750 aa6.24□□□□□ -1.41
CASC3-202ENST00000394114 NFICP08651 508 aa6.24□□□□□ -1.41
CASC3-202ENST00000394114 STAG3L1P0CL83 205 aa6.24□□□□□ -1.41
CASC3-202ENST00000394114 CYBAP13498 195 aa6.24□□□□□ -1.41
CASC3-202ENST00000394114 ACPPP15309 386 aa6.24□□□□□ -1.41
CASC3-202ENST00000394114 BPIP17213 487 aa6.24□□□□□ -1.41
CASC3-202ENST00000394114 CD58P19256 250 aa6.24□□□□□ -1.41
CASC3-202ENST00000394114 GALCP54803 685 aa6.24□□□□□ -1.41
CASC3-202ENST00000394114 MYL6P60660 151 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms