RNA–Protein interactions for RNA: ENST00000393551.5

PDLIM7-205, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best) BASIC

Gene PDLIM7, Length 1,226 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-205ENST00000393551 TMEM174Q8WUU8 243 aa19.47■□□□□ 0.71
PDLIM7-205ENST00000393551 EZH1Q92800 747 aaPredicted RBP19.47■□□□□ 0.71
PDLIM7-205ENST00000393551 TTLL2Q9BWV7 592 aa19.47■□□□□ 0.71
PDLIM7-205ENST00000393551 SNX25Q9H3E2 840 aa19.47■□□□□ 0.71
PDLIM7-205ENST00000393551 POLR3BQ9NW08 1133 aaPredicted RBP19.47■□□□□ 0.71
PDLIM7-205ENST00000393551 DLL3Q9NYJ7 618 aa19.47■□□□□ 0.71
PDLIM7-205ENST00000393551 WNT6Q9Y6F9 365 aa19.47■□□□□ 0.71
PDLIM7-205ENST00000393551 F8VP50 259 aa19.46■□□□□ 0.71
PDLIM7-205ENST00000393551 VNN1O95497 513 aa19.46■□□□□ 0.71
PDLIM7-205ENST00000393551 EGFP01133 1207 aa19.46■□□□□ 0.71
PDLIM7-205ENST00000393551 C4BPAP04003 597 aaKnown RBP19.46■□□□□ 0.71
PDLIM7-205ENST00000393551 CKMP06732 381 aa19.46■□□□□ 0.71
PDLIM7-205ENST00000393551 GJA4P35212 333 aa19.46■□□□□ 0.71
PDLIM7-205ENST00000393551 GALK1P51570 392 aa19.46■□□□□ 0.71
PDLIM7-205ENST00000393551 CDH8P55286 799 aa19.46■□□□□ 0.71
PDLIM7-205ENST00000393551 DLG4P78352 724 aa19.46■□□□□ 0.71
PDLIM7-205ENST00000393551 FOXK2Q01167 660 aa19.46■□□□□ 0.71
PDLIM7-205ENST00000393551 PDGFRLQ15198 375 aa19.46■□□□□ 0.71
PDLIM7-205ENST00000393551 EML3Q32P44 896 aa19.46■□□□□ 0.71
PDLIM7-205ENST00000393551 HEATR6Q6AI08 1181 aaKnown RBP19.46■□□□□ 0.71
PDLIM7-205ENST00000393551 CC2D1AQ6P1N0 951 aaPredicted RBP19.46■□□□□ 0.71
PDLIM7-205ENST00000393551 OSCP1Q8WVF1 389 aa19.46■□□□□ 0.71
PDLIM7-205ENST00000393551 C8orf48Q96LL4 319 aa19.46■□□□□ 0.71
PDLIM7-205ENST00000393551 CEP295NLQ96MC4 621 aa19.46■□□□□ 0.71
PDLIM7-205ENST00000393551 B3GNT5Q9BYG0 378 aa19.46■□□□□ 0.71
PDLIM7-205ENST00000393551 ZNF518BQ9C0D4 1074 aa19.46■□□□□ 0.71
PDLIM7-205ENST00000393551 RNF38Q9H0F5 515 aa19.46■□□□□ 0.71
PDLIM7-205ENST00000393551 LINC00597Q9H2U6 94 aa19.46■□□□□ 0.71
PDLIM7-205ENST00000393551 SMYD3Q9H7B4 428 aa19.46■□□□□ 0.71
PDLIM7-205ENST00000393551 ECT2Q9H8V3 914 aa19.46■□□□□ 0.71
PDLIM7-205ENST00000393551 VRTNQ9H8Y1 702 aa19.46■□□□□ 0.71
PDLIM7-205ENST00000393551 NXF1Q9UBU9 619 aaKnown RBP19.46■□□□□ 0.71
PDLIM7-205ENST00000393551 LAMA1P25391 3075 aa19.46■□□□□ 0.71
PDLIM7-205ENST00000393551 RALGAPA1Q6GYQ0 2036 aa19.46■□□□□ 0.71
PDLIM7-205ENST00000393551 SPAG17Q6Q759 2223 aa19.45■□□□□ 0.7
PDLIM7-205ENST00000393551 CLDN5O00501 218 aa19.45■□□□□ 0.7
PDLIM7-205ENST00000393551 HDCP19113 662 aa19.45■□□□□ 0.7
PDLIM7-205ENST00000393551 HOXA6P31267 233 aa19.45■□□□□ 0.7
PDLIM7-205ENST00000393551 ATICP31939 592 aa19.45■□□□□ 0.7
PDLIM7-205ENST00000393551 TNNC1P63316 161 aa19.45■□□□□ 0.7
PDLIM7-205ENST00000393551 NOP14P78316 857 aaKnown RBP19.45■□□□□ 0.7
PDLIM7-205ENST00000393551 TRPC3Q13507 836 aa19.45■□□□□ 0.7
PDLIM7-205ENST00000393551 LONP2Q86WA8 852 aa19.45■□□□□ 0.7
PDLIM7-205ENST00000393551 SLC9A9Q8IVB4 645 aa19.45■□□□□ 0.7
PDLIM7-205ENST00000393551 FSIP1Q8NA03 581 aa19.45■□□□□ 0.7
PDLIM7-205ENST00000393551 TTC16Q8NEE8 873 aa19.45■□□□□ 0.7
PDLIM7-205ENST00000393551 SH3RF2Q8TEC5 729 aa19.45■□□□□ 0.7
PDLIM7-205ENST00000393551 SDCBP2Q9H190 292 aa19.45■□□□□ 0.7
PDLIM7-205ENST00000393551 DUS2Q9NX74 493 aaKnown RBP19.45■□□□□ 0.7
PDLIM7-205ENST00000393551 ARHGAP26Q9UNA1 814 aa19.45■□□□□ 0.7
PDLIM7-205ENST00000393551 MYOFQ9NZM1 2061 aa19.45■□□□□ 0.7
PDLIM7-205ENST00000393551 ZNF840PA6NDX5 716 aa19.44■□□□□ 0.7
PDLIM7-205ENST00000393551 A8MXQ7 604 aa19.44■□□□□ 0.7
PDLIM7-205ENST00000393551 TRIM66O15016 1216 aa19.44■□□□□ 0.7
PDLIM7-205ENST00000393551 PRR29P0C7W0 189 aa19.44■□□□□ 0.7
PDLIM7-205ENST00000393551 TCF3P15923 654 aa19.44■□□□□ 0.7
PDLIM7-205ENST00000393551 RAP1GAPP47736 663 aa19.44■□□□□ 0.7
PDLIM7-205ENST00000393551 GRSF1Q12849 480 aaKnown RBP eCLIP19.44■□□□□ 0.7
PDLIM7-205ENST00000393551 PSMD2Q13200 908 aa19.44■□□□□ 0.7
PDLIM7-205ENST00000393551 RSPO4Q2I0M5 234 aaPredicted RBP19.44■□□□□ 0.7
PDLIM7-205ENST00000393551 C1orf220Q5T0J3 134 aa19.44■□□□□ 0.7
PDLIM7-205ENST00000393551 PAQR9Q6ZVX9 377 aa19.44■□□□□ 0.7
PDLIM7-205ENST00000393551 B3GALNT2Q8NCR0 500 aa19.44■□□□□ 0.7
PDLIM7-205ENST00000393551 GOLGA5Q8TBA6 731 aa19.44■□□□□ 0.7
PDLIM7-205ENST00000393551 SYAP1Q96A49 352 aaPredicted RBP19.44■□□□□ 0.7
PDLIM7-205ENST00000393551 EXOC1Q9NV70 894 aa19.44■□□□□ 0.7
PDLIM7-205ENST00000393551 FAM237AA0A1B0GTK4 181 aa19.43■□□□□ 0.7
PDLIM7-205ENST00000393551 RNF40O75150 1001 aa19.43■□□□□ 0.7
PDLIM7-205ENST00000393551 OLFM2O95897 454 aa19.43■□□□□ 0.7
PDLIM7-205ENST00000393551 ANXA13P27216 316 aa19.43■□□□□ 0.7
PDLIM7-205ENST00000393551 NCOA4Q13772 614 aa19.43■□□□□ 0.7
PDLIM7-205ENST00000393551 SIM2Q14190 667 aaPredicted RBP19.43■□□□□ 0.7
PDLIM7-205ENST00000393551 KCNB1Q14721 858 aa19.43■□□□□ 0.7
PDLIM7-205ENST00000393551 GAB4Q2WGN9 574 aa19.43■□□□□ 0.7
PDLIM7-205ENST00000393551 LAIR1Q6GTX8 287 aa19.43■□□□□ 0.7
PDLIM7-205ENST00000393551 PRR23BQ6ZRT6 265 aa19.43■□□□□ 0.7
PDLIM7-205ENST00000393551 SPATA32Q96LK8 384 aa19.43■□□□□ 0.7
PDLIM7-205ENST00000393551 KCNK16Q96T55 309 aa19.43■□□□□ 0.7
PDLIM7-205ENST00000393551 TRPM5Q9NZQ8 1165 aa19.43■□□□□ 0.7
PDLIM7-205ENST00000393551 ANTXRLA6NF34 631 aa19.42■□□□□ 0.7
PDLIM7-205ENST00000393551 PDXKO00764 312 aa19.42■□□□□ 0.7
PDLIM7-205ENST00000393551 PHACTR2O75167 634 aa19.42■□□□□ 0.7
PDLIM7-205ENST00000393551 NR3C1P04150 777 aa19.42■□□□□ 0.7
PDLIM7-205ENST00000393551 PXNP49023 591 aaPredicted RBP19.42■□□□□ 0.7
PDLIM7-205ENST00000393551 NDUFA8P51970 172 aa19.42■□□□□ 0.7
PDLIM7-205ENST00000393551 SPEM2Q0P670 501 aa19.42■□□□□ 0.7
PDLIM7-205ENST00000393551 TAF10Q12962 218 aa19.42■□□□□ 0.7
PDLIM7-205ENST00000393551 BIRC3Q13489 604 aa19.42■□□□□ 0.7
PDLIM7-205ENST00000393551 PUM1Q14671 1186 aaKnown RBP eCLIP19.42■□□□□ 0.72e-7■□□□□ 10.8
PDLIM7-205ENST00000393551 ZNF699Q32M78 642 aa19.42■□□□□ 0.7
PDLIM7-205ENST00000393551 WDR5BQ86VZ2 330 aa19.42■□□□□ 0.7
PDLIM7-205ENST00000393551 CPA6Q8N4T0 437 aa19.42■□□□□ 0.7
PDLIM7-205ENST00000393551 SECISBP2LQ93073 1101 aaKnown RBP19.42■□□□□ 0.7
PDLIM7-205ENST00000393551 P2RY13Q9BPV8 354 aa19.42■□□□□ 0.7
PDLIM7-205ENST00000393551 ELOVL4Q9GZR5 314 aa19.42■□□□□ 0.7
PDLIM7-205ENST00000393551 GMEB2Q9UKD1 530 aa19.42■□□□□ 0.7
PDLIM7-205ENST00000393551 MYH10P35580 1976 aa19.41■□□□□ 0.7
PDLIM7-205ENST00000393551 MED19A0JLT2 244 aaPredicted RBP19.41■□□□□ 0.7
PDLIM7-205ENST00000393551 LEFTY2O00292 366 aa19.41■□□□□ 0.7
PDLIM7-205ENST00000393551 OAS1P00973 400 aaKnown RBP19.41■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms