RNA–Protein interactions for RNA: ENST00000392959.5

LCA5-202, Transcript of LCA5, lebercilin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LCA5, Length 4,719 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCA5-202ENST00000392959 CYP2C9P11712 490 aa13.6□□□□□ -0.23
LCA5-202ENST00000392959 GRK2P25098 689 aa13.6□□□□□ -0.23
LCA5-202ENST00000392959 PSMA4P25789 261 aaKnown RBP13.6□□□□□ -0.23
LCA5-202ENST00000392959 TWF1Q12792 350 aa13.6□□□□□ -0.23
LCA5-202ENST00000392959 BNC2Q6ZN30 1099 aaPredicted RBP13.6□□□□□ -0.23
LCA5-202ENST00000392959 DENND5BQ6ZUT9 1274 aa13.6□□□□□ -0.23
LCA5-202ENST00000392959 SV2AQ7L0J3 742 aa13.6□□□□□ -0.23
LCA5-202ENST00000392959 TMC3Q7Z5M5 1100 aa13.6□□□□□ -0.23
LCA5-202ENST00000392959 TUBGCP3Q96CW5 907 aa13.6□□□□□ -0.23
LCA5-202ENST00000392959 C17orf80Q9BSJ5 609 aa13.6□□□□□ -0.23
LCA5-202ENST00000392959 KCTD10Q9H3F6 313 aa13.6□□□□□ -0.23
LCA5-202ENST00000392959 VDRP11473 427 aa13.6□□□□□ -0.23
LCA5-202ENST00000392959 TFE3P19532 575 aaPredicted RBP13.6□□□□□ -0.23
LCA5-202ENST00000392959 TAF6P49848 677 aa13.6□□□□□ -0.23
LCA5-202ENST00000392959 POU4F1Q01851 419 aa13.6□□□□□ -0.23
LCA5-202ENST00000392959 SLC5A5Q92911 643 aa13.6□□□□□ -0.23
LCA5-202ENST00000392959 FAR2Q96K12 515 aa13.6□□□□□ -0.23
LCA5-202ENST00000392959 FOPNLQ96NB1 174 aa13.6□□□□□ -0.23
LCA5-202ENST00000392959 TMEM120AQ9BXJ8 343 aa13.6□□□□□ -0.23
LCA5-202ENST00000392959 LRRC40Q9H9A6 602 aa13.6□□□□□ -0.23
LCA5-202ENST00000392959 SEPT3Q9UH03 358 aa13.6□□□□□ -0.23
LCA5-202ENST00000392959 TAGLN3Q9UI15 199 aa13.6□□□□□ -0.23
LCA5-202ENST00000392959 FAM95CA0A1B0GW59 222 aa13.59□□□□□ -0.23
LCA5-202ENST00000392959 SPDYE5A6NIY4 337 aa13.59□□□□□ -0.23
LCA5-202ENST00000392959 TM9SF1O15321 606 aa13.59□□□□□ -0.23
LCA5-202ENST00000392959 RIPK2O43353 540 aa13.59□□□□□ -0.23
LCA5-202ENST00000392959 TADA2AO75478 443 aa13.59□□□□□ -0.23
LCA5-202ENST00000392959 SOAT2O75908 522 aa13.59□□□□□ -0.23
LCA5-202ENST00000392959 ZBTB7AO95365 584 aa13.59□□□□□ -0.23
LCA5-202ENST00000392959 ATP6V1G2O95670 118 aa13.59□□□□□ -0.23
LCA5-202ENST00000392959 RALBP11234 206 aa13.59□□□□□ -0.23
LCA5-202ENST00000392959 PNPLA4P41247 253 aa13.59□□□□□ -0.23
LCA5-202ENST00000392959 ZNF844Q08AG5 666 aa13.59□□□□□ -0.23
LCA5-202ENST00000392959 SPDYE7PQ495Y7 208 aa13.59□□□□□ -0.23
LCA5-202ENST00000392959 VPS50Q96JG6 964 aa13.59□□□□□ -0.23
LCA5-202ENST00000392959 POP1Q99575 1024 aaKnown RBP13.59□□□□□ -0.23
LCA5-202ENST00000392959 FKBP6O75344 327 aa13.59□□□□□ -0.23
LCA5-202ENST00000392959 CYBBP04839 570 aa13.59□□□□□ -0.23
LCA5-202ENST00000392959 FAM153BP0C7A2 387 aa13.59□□□□□ -0.23
LCA5-202ENST00000392959 FGFR2P21802 821 aa13.59□□□□□ -0.23
LCA5-202ENST00000392959 SERPINB8P50452 374 aa13.59□□□□□ -0.23
LCA5-202ENST00000392959 ADRM1Q16186 407 aa13.59□□□□□ -0.23
LCA5-202ENST00000392959 FAM153CQ494X1 144 aa13.59□□□□□ -0.23
LCA5-202ENST00000392959 SGO1Q5FBB7 561 aa13.59□□□□□ -0.23
LCA5-202ENST00000392959 VPS37AQ8NEZ2 397 aa13.59□□□□□ -0.23
LCA5-202ENST00000392959 AENQ8WTP8 325 aaKnown RBP13.59□□□□□ -0.23
LCA5-202ENST00000392959 DUSP9Q99956 384 aaKnown RBP13.59□□□□□ -0.23
LCA5-202ENST00000392959 CNPY3Q9BT09 278 aa13.59□□□□□ -0.23
LCA5-202ENST00000392959 RIOX1Q9H6W3 641 aa13.59□□□□□ -0.23
LCA5-202ENST00000392959 FAM153AQ9UHL3 310 aa13.59□□□□□ -0.23
LCA5-202ENST00000392959 AP4S1Q9Y587 144 aa13.59□□□□□ -0.23
LCA5-202ENST00000392959 PIK3CDO00329 1044 aa13.59□□□□□ -0.23
LCA5-202ENST00000392959 SERPINB1P30740 379 aa13.59□□□□□ -0.23
LCA5-202ENST00000392959 NUP107P57740 925 aa13.59□□□□□ -0.23
LCA5-202ENST00000392959 UBE3AQ05086 875 aa13.59□□□□□ -0.23
LCA5-202ENST00000392959 TRMT5Q32P41 509 aaKnown RBP13.59□□□□□ -0.23
LCA5-202ENST00000392959 SEL1L3Q68CR1 1132 aa13.59□□□□□ -0.23
LCA5-202ENST00000392959 CHSY1Q86X52 802 aa13.59□□□□□ -0.23
LCA5-202ENST00000392959 ACER1Q8TDN7 264 aa13.59□□□□□ -0.23
LCA5-202ENST00000392959 CCDC126Q96EE4 140 aa13.59□□□□□ -0.23
LCA5-202ENST00000392959 ZNF512Q96ME7 567 aaPredicted RBP13.59□□□□□ -0.23
LCA5-202ENST00000392959 UBQLN1Q9UMX0 589 aaKnown RBP13.59□□□□□ -0.23
LCA5-202ENST00000392959 SHOC2Q9UQ13 582 aa13.59□□□□□ -0.23
LCA5-202ENST00000392959 SLC25A27O95847 323 aa13.59□□□□□ -0.23
LCA5-202ENST00000392959 TFRCP02786 760 aaKnown RBP13.59□□□□□ -0.23
LCA5-202ENST00000392959 PSMC3P17980 439 aa13.59□□□□□ -0.23
LCA5-202ENST00000392959 BGNP21810 368 aa13.59□□□□□ -0.23
LCA5-202ENST00000392959 TCF7P36402 384 aaPredicted RBP13.59□□□□□ -0.23
LCA5-202ENST00000392959 NAMPTP43490 491 aa13.59□□□□□ -0.23
LCA5-202ENST00000392959 EARS2Q5JPH6 523 aaKnown RBP13.59□□□□□ -0.23
LCA5-202ENST00000392959 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.59□□□□□ -0.23
LCA5-202ENST00000392959 GJD4Q96KN9 370 aaPredicted RBP13.59□□□□□ -0.23
LCA5-202ENST00000392959 DYRK4Q9NR20 520 aa13.59□□□□□ -0.23
LCA5-202ENST00000392959 SNX13Q9Y5W8 968 aa13.59□□□□□ -0.23
LCA5-202ENST00000392959 E9PCH4 1651 aa13.59□□□□□ -0.23
LCA5-202ENST00000392959 TNPO2O14787 897 aaKnown RBP13.58□□□□□ -0.23
LCA5-202ENST00000392959 SYTL3Q4VX76 610 aa13.58□□□□□ -0.23
LCA5-202ENST00000392959 PCNX4Q63HM2 1172 aa13.58□□□□□ -0.23
LCA5-202ENST00000392959 PKN3Q6P5Z2 889 aa13.58□□□□□ -0.23
LCA5-202ENST00000392959 NOTUMQ6P988 496 aa13.58□□□□□ -0.23
LCA5-202ENST00000392959 HORMAD1Q86X24 394 aa13.58□□□□□ -0.23
LCA5-202ENST00000392959 B4GALNT2Q8NHY0 566 aa13.58□□□□□ -0.23
LCA5-202ENST00000392959 THUMPD3Q9BV44 507 aaKnown RBP13.58□□□□□ -0.23
LCA5-202ENST00000392959 PCDH9Q9HC56 1237 aa13.58□□□□□ -0.23
LCA5-202ENST00000392959 CES2O00748 559 aa13.58□□□□□ -0.24
LCA5-202ENST00000392959 RPS6KA5O75582 802 aa13.58□□□□□ -0.24
LCA5-202ENST00000392959 USP1O94782 785 aa13.58□□□□□ -0.24
LCA5-202ENST00000392959 C6orf222P0C671 652 aaPredicted RBP13.58□□□□□ -0.24
LCA5-202ENST00000392959 CNTFP26441 200 aa13.58□□□□□ -0.24
LCA5-202ENST00000392959 ORC1Q13415 861 aa13.58□□□□□ -0.24
LCA5-202ENST00000392959 TNIP2Q8NFZ5 429 aa13.58□□□□□ -0.24
LCA5-202ENST00000392959 CGRRF1Q99675 332 aa13.58□□□□□ -0.24
LCA5-202ENST00000392959 KATNAL1Q9BW62 490 aa13.58□□□□□ -0.24
LCA5-202ENST00000392959 GPR63Q9BZJ6 419 aa13.58□□□□□ -0.24
LCA5-202ENST00000392959 CHST12Q9NRB3 414 aa13.58□□□□□ -0.24
LCA5-202ENST00000392959 DPP3Q9NY33 737 aa13.58□□□□□ -0.24
LCA5-202ENST00000392959 IL1RAPL1Q9NZN1 696 aa13.58□□□□□ -0.24
LCA5-202ENST00000392959 RNF181Q9P0P0 153 aa13.58□□□□□ -0.24
LCA5-202ENST00000392959 LSM7Q9UK45 103 aaKnown RBP13.58□□□□□ -0.24
LCA5-202ENST00000392959 NFIBO00712 420 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms