RNA–Protein interactions for RNA: ENST00000392334.6

CSNK1D-203, Transcript of casein kinase 1 delta, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CSNK1D, Length 2,047 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-203ENST00000392334 AGO3Q9H9G7 860 aaKnown RBP20.92■□□□□ 0.94
CSNK1D-203ENST00000392334 IPPQ9Y573 584 aa20.92■□□□□ 0.94
CSNK1D-203ENST00000392334 PCDHB2Q9Y5E7 798 aa20.92■□□□□ 0.94
CSNK1D-203ENST00000392334 ATP2C2O75185 946 aa20.92■□□□□ 0.94
CSNK1D-203ENST00000392334 GNA15P30679 374 aa20.92■□□□□ 0.94
CSNK1D-203ENST00000392334 SLCO1A2P46721 670 aa20.92■□□□□ 0.94
CSNK1D-203ENST00000392334 ATN1P54259 1190 aaPredicted RBP20.92■□□□□ 0.94
CSNK1D-203ENST00000392334 KRT17Q04695 432 aa20.92■□□□□ 0.94
CSNK1D-203ENST00000392334 PTK6Q13882 451 aa20.92■□□□□ 0.94
CSNK1D-203ENST00000392334 PASD1Q8IV76 773 aa20.92■□□□□ 0.94
CSNK1D-203ENST00000392334 UHMK1Q8TAS1 419 aaKnown RBP20.92■□□□□ 0.94
CSNK1D-203ENST00000392334 DIS3LQ8TF46 1054 aaKnown RBP20.92■□□□□ 0.94
CSNK1D-203ENST00000392334 BTBD6Q96KE9 485 aa20.92■□□□□ 0.94
CSNK1D-203ENST00000392334 C2CD2Q9Y426 696 aa20.92■□□□□ 0.94
CSNK1D-203ENST00000392334 MEIS3P2A8K0S8 358 aa20.91■□□□□ 0.94
CSNK1D-203ENST00000392334 PPEF2O14830 753 aa20.91■□□□□ 0.94
CSNK1D-203ENST00000392334 SGO2Q562F6 1265 aa20.91■□□□□ 0.94
CSNK1D-203ENST00000392334 ZNF667Q5HYK9 610 aa20.91■□□□□ 0.94
CSNK1D-203ENST00000392334 CCDC63Q8NA47 563 aa20.91■□□□□ 0.94
CSNK1D-203ENST00000392334 SMG8Q8ND04 991 aaKnown RBP20.91■□□□□ 0.94
CSNK1D-203ENST00000392334 HPDLQ96IR7 371 aa20.91■□□□□ 0.94
CSNK1D-203ENST00000392334 AVENQ9NQS1 362 aaPredicted RBP20.91■□□□□ 0.94
CSNK1D-203ENST00000392334 IVDP26440 423 aa20.9■□□□□ 0.94
CSNK1D-203ENST00000392334 PTPN11Q06124 597 aaPredicted RBP20.9■□□□□ 0.94
CSNK1D-203ENST00000392334 MGAT3Q09327 533 aa20.9■□□□□ 0.94
CSNK1D-203ENST00000392334 CLEC16AQ2KHT3 1053 aa20.9■□□□□ 0.94
CSNK1D-203ENST00000392334 C2CD6Q53TS8 623 aa20.9■□□□□ 0.94
CSNK1D-203ENST00000392334 GRK7Q8WTQ7 553 aa20.9■□□□□ 0.94
CSNK1D-203ENST00000392334 CPA5Q8WXQ8 436 aa20.9■□□□□ 0.94
CSNK1D-203ENST00000392334 SNF8Q96H20 258 aa20.9■□□□□ 0.94
CSNK1D-203ENST00000392334 SMYD3Q9H7B4 428 aa20.9■□□□□ 0.94
CSNK1D-203ENST00000392334 THAP12O43422 761 aa20.9■□□□□ 0.94
CSNK1D-203ENST00000392334 ATP6V1G2O95670 118 aa20.9■□□□□ 0.94
CSNK1D-203ENST00000392334 CD52P31358 61 aa20.9■□□□□ 0.94
CSNK1D-203ENST00000392334 PHLDB2Q86SQ0 1253 aa20.9■□□□□ 0.94
CSNK1D-203ENST00000392334 ARHGEF2Q92974 986 aaKnown RBP20.9■□□□□ 0.94
CSNK1D-203ENST00000392334 SDCBP2Q9H190 292 aa20.9■□□□□ 0.94
CSNK1D-203ENST00000392334 CXorf56Q9H5V9 222 aa20.9■□□□□ 0.94
CSNK1D-203ENST00000392334 PLEKHA5Q9HAU0 1116 aa20.9■□□□□ 0.94
CSNK1D-203ENST00000392334 USP15Q9Y4E8 981 aaPredicted RBP20.9■□□□□ 0.94
CSNK1D-203ENST00000392334 TTC4O95801 387 aa20.89■□□□□ 0.93
CSNK1D-203ENST00000392334 SLC1A1P43005 524 aa20.89■□□□□ 0.93
CSNK1D-203ENST00000392334 CDK7P50613 346 aa20.89■□□□□ 0.93
CSNK1D-203ENST00000392334 PTK7Q13308 1070 aa20.89■□□□□ 0.93
CSNK1D-203ENST00000392334 VSTM1Q6UX27 236 aa20.89■□□□□ 0.93
CSNK1D-203ENST00000392334 ALKAL1Q6UXT8 129 aa20.89■□□□□ 0.93
CSNK1D-203ENST00000392334 CCDC25Q86WR0 208 aa20.89■□□□□ 0.93
CSNK1D-203ENST00000392334 UBR7Q8N806 425 aa20.89■□□□□ 0.93
CSNK1D-203ENST00000392334 PLCD4Q9BRC7 762 aa20.89■□□□□ 0.93
CSNK1D-203ENST00000392334 DDX23Q9BUQ8 820 aaKnown RBP20.89■□□□□ 0.93
CSNK1D-203ENST00000392334 GOLGA2P5Q9HBQ8 144 aa20.89■□□□□ 0.93
CSNK1D-203ENST00000392334 EZRP15311 586 aaKnown RBP20.88■□□□□ 0.93
CSNK1D-203ENST00000392334 GJA8P48165 433 aa20.88■□□□□ 0.93
CSNK1D-203ENST00000392334 RBP5P82980 135 aa20.88■□□□□ 0.93
CSNK1D-203ENST00000392334 PTP4A2Q12974 167 aa20.88■□□□□ 0.93
CSNK1D-203ENST00000392334 LONRF1Q17RB8 773 aa20.88■□□□□ 0.93
CSNK1D-203ENST00000392334 TRIM71Q2Q1W2 868 aaKnown RBP20.88■□□□□ 0.93
CSNK1D-203ENST00000392334 GALNTL6Q49A17 601 aa20.88■□□□□ 0.93
CSNK1D-203ENST00000392334 ZNF618Q5T7W0 954 aa20.88■□□□□ 0.93
CSNK1D-203ENST00000392334 HIBCHQ6NVY1 386 aaPredicted RBP20.88■□□□□ 0.93
CSNK1D-203ENST00000392334 GBP7Q8N8V2 638 aaPredicted RBP20.88■□□□□ 0.93
CSNK1D-203ENST00000392334 ZFP42Q96MM3 310 aa20.88■□□□□ 0.93
CSNK1D-203ENST00000392334 ITGA11Q9UKX5 1188 aa20.88■□□□□ 0.93
CSNK1D-203ENST00000392334 PADI3Q9ULW8 664 aa20.88■□□□□ 0.93
CSNK1D-203ENST00000392334 SMIM28A0A1B0GU29 152 aa20.88■□□□□ 0.93
CSNK1D-203ENST00000392334 BRD2P25440 801 aaKnown RBP20.88■□□□□ 0.93
CSNK1D-203ENST00000392334 IFNAR2P48551 515 aa20.88■□□□□ 0.93
CSNK1D-203ENST00000392334 BPIFB4P59827 614 aa20.88■□□□□ 0.93
CSNK1D-203ENST00000392334 C1orf54Q8WWF1 131 aa20.88■□□□□ 0.93
CSNK1D-203ENST00000392334 CKAP2Q8WWK9 683 aa20.88■□□□□ 0.93
CSNK1D-203ENST00000392334 LPPQ93052 612 aa20.88■□□□□ 0.93
CSNK1D-203ENST00000392334 CNTN3Q9P232 1028 aa20.88■□□□□ 0.93
CSNK1D-203ENST00000392334 HMGXB4Q9UGU5 601 aa20.88■□□□□ 0.93
CSNK1D-203ENST00000392334 LGALS13Q9UHV8 139 aa20.88■□□□□ 0.93
CSNK1D-203ENST00000392334 CNTN6Q9UQ52 1028 aa20.88■□□□□ 0.93
CSNK1D-203ENST00000392334 CITO14578 2027 aa20.88■□□□□ 0.93
CSNK1D-203ENST00000392334 TMEM120BA0PK00 339 aa20.87■□□□□ 0.93
CSNK1D-203ENST00000392334 O00370 1275 aa20.87■□□□□ 0.93
CSNK1D-203ENST00000392334 MYBL1P10243 752 aa20.87■□□□□ 0.93
CSNK1D-203ENST00000392334 CENPCQ03188 943 aa20.87■□□□□ 0.93
CSNK1D-203ENST00000392334 TRIP11Q15643 1979 aa20.87■□□□□ 0.93
CSNK1D-203ENST00000392334 CCDC38Q502W7 563 aa20.87■□□□□ 0.93
CSNK1D-203ENST00000392334 FAM126BQ8IXS8 530 aa20.87■□□□□ 0.93
CSNK1D-203ENST00000392334 ZNF606Q8WXB4 792 aa20.87■□□□□ 0.93
CSNK1D-203ENST00000392334 TRIM11Q96F44 468 aa20.87■□□□□ 0.93
CSNK1D-203ENST00000392334 DCLK3Q9C098 648 aa20.87■□□□□ 0.93
CSNK1D-203ENST00000392334 MCOLN1Q9GZU1 580 aa20.87■□□□□ 0.93
CSNK1D-203ENST00000392334 NOD2Q9HC29 1040 aa20.87■□□□□ 0.93
CSNK1D-203ENST00000392334 ASIC3Q9UHC3 531 aa20.87■□□□□ 0.93
CSNK1D-203ENST00000392334 PQBP1O60828 265 aaKnown RBP20.87■□□□□ 0.93
CSNK1D-203ENST00000392334 SUN1O94901 812 aa20.87■□□□□ 0.93
CSNK1D-203ENST00000392334 GAS8O95995 478 aa20.87■□□□□ 0.93
CSNK1D-203ENST00000392334 UNGP13051 313 aaPredicted RBP20.87■□□□□ 0.93
CSNK1D-203ENST00000392334 CHKAP35790 457 aa20.87■□□□□ 0.93
CSNK1D-203ENST00000392334 AFF1P51825 1210 aaKnown RBP20.87■□□□□ 0.93
CSNK1D-203ENST00000392334 ZNF132P52740 706 aa20.87■□□□□ 0.93
CSNK1D-203ENST00000392334 ZBTB6Q15916 424 aa20.87■□□□□ 0.93
CSNK1D-203ENST00000392334 FBXO47Q5MNV8 452 aa20.87■□□□□ 0.93
CSNK1D-203ENST00000392334 ZNF677Q86XU0 584 aa20.87■□□□□ 0.93
CSNK1D-203ENST00000392334 RELL1Q8IUW5 271 aa20.87■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms