RNA–Protein interactions for RNA: ENST00000381551.8

PDGFB-202, Transcript of platelet derived growth factor subunit B, humanhuman

TSL 5 BASIC

Gene PDGFB, Length 1,125 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFB-202ENST00000381551 GPD2P43304 727 aa16.36■□□□□ 0.21
PDGFB-202ENST00000381551 ITIH3Q06033 890 aa16.36■□□□□ 0.21
PDGFB-202ENST00000381551 PDE4CQ08493 712 aa16.36■□□□□ 0.21
PDGFB-202ENST00000381551 MEA1Q16626 185 aa16.36■□□□□ 0.21
PDGFB-202ENST00000381551 E4F1Q66K89 784 aaPredicted RBP16.36■□□□□ 0.21
PDGFB-202ENST00000381551 DENND1BQ6P3S1 775 aa16.36■□□□□ 0.21
PDGFB-202ENST00000381551 ZNF677Q86XU0 584 aa16.36■□□□□ 0.21
PDGFB-202ENST00000381551 FMNL3Q8IVF7 1028 aa16.36■□□□□ 0.21
PDGFB-202ENST00000381551 WDTC1Q8N5D0 677 aa16.36■□□□□ 0.21
PDGFB-202ENST00000381551 SLC35F5Q8WV83 523 aa16.36■□□□□ 0.21
PDGFB-202ENST00000381551 PSMG2Q969U7 264 aa16.36■□□□□ 0.21
PDGFB-202ENST00000381551 APOL5Q9BWW9 433 aa16.36■□□□□ 0.21
PDGFB-202ENST00000381551 LHX5Q9H2C1 402 aa16.36■□□□□ 0.21
PDGFB-202ENST00000381551 COG5Q9UP83 839 aa16.36■□□□□ 0.21
PDGFB-202ENST00000381551 SPTBN5Q9NRC6 3674 aaKnown RBP16.35■□□□□ 0.21
PDGFB-202ENST00000381551 SLC38A8A6NNN8 435 aa16.35■□□□□ 0.21
PDGFB-202ENST00000381551 H3BQ06 376 aaPredicted RBP16.35■□□□□ 0.21
PDGFB-202ENST00000381551 M0QYV0 167 aa16.35■□□□□ 0.21
PDGFB-202ENST00000381551 TULP2O00295 520 aa16.35■□□□□ 0.21
PDGFB-202ENST00000381551 XYLBO75191 536 aa16.35■□□□□ 0.21
PDGFB-202ENST00000381551 HMGA1P17096 107 aaKnown RBP16.35■□□□□ 0.21
PDGFB-202ENST00000381551 CHRNB2P17787 502 aa16.35■□□□□ 0.21
PDGFB-202ENST00000381551 PRKCIP41743 596 aa16.35■□□□□ 0.21
PDGFB-202ENST00000381551 PDE6CP51160 858 aa16.35■□□□□ 0.21
PDGFB-202ENST00000381551 BCAT1P54687 386 aa16.35■□□□□ 0.21
PDGFB-202ENST00000381551 SLC8A3P57103 927 aa16.35■□□□□ 0.21
PDGFB-202ENST00000381551 CDR2Q01850 454 aa16.35■□□□□ 0.21
PDGFB-202ENST00000381551 BST2Q10589 180 aaKnown RBP16.35■□□□□ 0.21
PDGFB-202ENST00000381551 MTMR3Q13615 1198 aa16.35■□□□□ 0.21
PDGFB-202ENST00000381551 GSE1Q14687 1217 aa16.35■□□□□ 0.21
PDGFB-202ENST00000381551 ASIC2Q16515 512 aa16.35■□□□□ 0.21
PDGFB-202ENST00000381551 TAF3Q5VWG9 929 aa16.35■□□□□ 0.21
PDGFB-202ENST00000381551 DENND5BQ6ZUT9 1274 aa16.35■□□□□ 0.21
PDGFB-202ENST00000381551 ITIH5Q86UX2 942 aa16.35■□□□□ 0.21
PDGFB-202ENST00000381551 PIGZQ86VD9 579 aa16.35■□□□□ 0.21
PDGFB-202ENST00000381551 NUP93Q8N1F7 819 aa16.35■□□□□ 0.21
PDGFB-202ENST00000381551 SLC20A1Q8WUM9 679 aa16.35■□□□□ 0.21
PDGFB-202ENST00000381551 SMG7Q92540 1137 aaKnown RBP16.35■□□□□ 0.21
PDGFB-202ENST00000381551 SECISBP2LQ93073 1101 aaKnown RBP16.35■□□□□ 0.21
PDGFB-202ENST00000381551 LRRC3Q9BY71 257 aa16.35■□□□□ 0.21
PDGFB-202ENST00000381551 PIDD1Q9HB75 910 aa16.35■□□□□ 0.21
PDGFB-202ENST00000381551 DNMT3BQ9UBC3 853 aaKnown RBP16.35■□□□□ 0.21
PDGFB-202ENST00000381551 CD207Q9UJ71 328 aa16.35■□□□□ 0.21
PDGFB-202ENST00000381551 BRWD1Q9NSI6 2320 aa16.34■□□□□ 0.21
PDGFB-202ENST00000381551 XPO1O14980 1071 aaKnown RBP16.34■□□□□ 0.21
PDGFB-202ENST00000381551 MMEP08473 750 aa16.34■□□□□ 0.21
PDGFB-202ENST00000381551 TPM1P09493 284 aa16.34■□□□□ 0.21
PDGFB-202ENST00000381551 SETSIPP0DME0 302 aa16.34■□□□□ 0.21
PDGFB-202ENST00000381551 CSH1P0DML2 217 aa16.34■□□□□ 0.21
PDGFB-202ENST00000381551 CSH2P0DML3 217 aa16.34■□□□□ 0.21
PDGFB-202ENST00000381551 CDC25BP30305 580 aa16.34■□□□□ 0.21
PDGFB-202ENST00000381551 HNRNPH3P31942 346 aaKnown RBP16.34■□□□□ 0.21
PDGFB-202ENST00000381551 MRE11P49959 708 aa16.34■□□□□ 0.21
PDGFB-202ENST00000381551 ARID5BQ14865 1188 aa16.34■□□□□ 0.21
PDGFB-202ENST00000381551 VEPH1Q14D04 833 aa16.34■□□□□ 0.21
PDGFB-202ENST00000381551 CLUL1Q15846 466 aa16.34■□□□□ 0.21
PDGFB-202ENST00000381551 ATAT1Q5SQI0 421 aa16.34■□□□□ 0.21
PDGFB-202ENST00000381551 CES5AQ6NT32 575 aa16.34■□□□□ 0.21
PDGFB-202ENST00000381551 PMF1Q6P1K2 205 aa16.34■□□□□ 0.21
PDGFB-202ENST00000381551 GRASPQ7Z6J2 395 aaPredicted RBP16.34■□□□□ 0.21
PDGFB-202ENST00000381551 ELMOD1Q8N336 334 aa16.34■□□□□ 0.21
PDGFB-202ENST00000381551 SMRP1Q8NCR6 262 aa16.34■□□□□ 0.21
PDGFB-202ENST00000381551 STKLD1Q8NE28 680 aa16.34■□□□□ 0.21
PDGFB-202ENST00000381551 OR8K1Q8NGG5 319 aa16.34■□□□□ 0.21
PDGFB-202ENST00000381551 STK32AQ8WU08 396 aa16.34■□□□□ 0.21
PDGFB-202ENST00000381551 MYRFLQ96LU7 910 aa16.34■□□□□ 0.21
PDGFB-202ENST00000381551 DNAJC7Q99615 494 aa16.34■□□□□ 0.21
PDGFB-202ENST00000381551 AGPAT1Q99943 283 aa16.34■□□□□ 0.21
PDGFB-202ENST00000381551 PNPLA8Q9NP80 782 aa16.34■□□□□ 0.21
PDGFB-202ENST00000381551 HCFC1R1Q9NWW0 138 aa16.34■□□□□ 0.21
PDGFB-202ENST00000381551 IL37Q9NZH6 218 aa16.34■□□□□ 0.21
PDGFB-202ENST00000381551 PRUNE2Q8WUY3 3088 aa16.33■□□□□ 0.21
PDGFB-202ENST00000381551 XIRP2A4UGR9 3374 aa16.33■□□□□ 0.2
PDGFB-202ENST00000381551 AKR1B15C9JRZ8 316 aaPredicted RBP16.33■□□□□ 0.2
PDGFB-202ENST00000381551 GABBR2O75899 941 aa16.33■□□□□ 0.2
PDGFB-202ENST00000381551 SKILP12757 684 aa16.33■□□□□ 0.2
PDGFB-202ENST00000381551 PLA2G4AP47712 749 aa16.33■□□□□ 0.2
PDGFB-202ENST00000381551 RPL34P49207 117 aaKnown RBP16.33■□□□□ 0.2
PDGFB-202ENST00000381551 KIF11P52732 1056 aa16.33■□□□□ 0.2
PDGFB-202ENST00000381551 EPHA5P54756 1037 aa16.33■□□□□ 0.2
PDGFB-202ENST00000381551 ADKP55263 362 aaKnown RBP16.33■□□□□ 0.2
PDGFB-202ENST00000381551 USP46P62068 366 aa16.33■□□□□ 0.2
PDGFB-202ENST00000381551 FMO1Q01740 532 aa16.33■□□□□ 0.2
PDGFB-202ENST00000381551 GOLGA8FQ08AF8 430 aa16.33■□□□□ 0.2
PDGFB-202ENST00000381551 GOLGA8DPQ0D2H9 430 aa16.33■□□□□ 0.2
PDGFB-202ENST00000381551 TAF12Q16514 161 aa16.33■□□□□ 0.2
PDGFB-202ENST00000381551 LEXMQ3ZCV2 418 aa16.33■□□□□ 0.2
PDGFB-202ENST00000381551 RAB41Q5JT25 222 aa16.33■□□□□ 0.2
PDGFB-202ENST00000381551 HGSNATQ68CP4 663 aa16.33■□□□□ 0.2
PDGFB-202ENST00000381551 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.33■□□□□ 0.2
PDGFB-202ENST00000381551 DRC7Q8IY82 874 aa16.33■□□□□ 0.2
PDGFB-202ENST00000381551 HS6ST3Q8IZP7 471 aa16.33■□□□□ 0.2
PDGFB-202ENST00000381551 SCAMP5Q8TAC9 235 aa16.33■□□□□ 0.2
PDGFB-202ENST00000381551 KCTD13Q8WZ19 329 aa16.33■□□□□ 0.2
PDGFB-202ENST00000381551 TRMT2BQ96GJ1 504 aaKnown RBP16.33■□□□□ 0.2
PDGFB-202ENST00000381551 CORO1BQ9BR76 489 aa16.33■□□□□ 0.2
PDGFB-202ENST00000381551 SYT11Q9BT88 431 aa16.33■□□□□ 0.2
PDGFB-202ENST00000381551 PDCL3Q9H2J4 239 aa16.33■□□□□ 0.2
PDGFB-202ENST00000381551 HAUS4Q9H6D7 363 aa16.33■□□□□ 0.2
PDGFB-202ENST00000381551 PRDM6Q9NQX0 595 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms