RNA–Protein interactions for RNA: ENST00000380180.7

PDLIM5-205, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 2,020 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-205ENST00000380180 CDKN2BP42772 138 aa20.86■□□□□ 0.93
PDLIM5-205ENST00000380180 RAB27AP51159 221 aa20.86■□□□□ 0.93
PDLIM5-205ENST00000380180 BCAT1P54687 386 aa20.86■□□□□ 0.93
PDLIM5-205ENST00000380180 PLTPP55058 493 aa20.86■□□□□ 0.93
PDLIM5-205ENST00000380180 SLC6A3Q01959 620 aa20.86■□□□□ 0.93
PDLIM5-205ENST00000380180 TAF5Q15542 800 aa20.86■□□□□ 0.93
PDLIM5-205ENST00000380180 CFAP58Q5T655 872 aa20.86■□□□□ 0.93
PDLIM5-205ENST00000380180 ZDHHC24Q6UX98 284 aa20.86■□□□□ 0.93
PDLIM5-205ENST00000380180 ATL2Q8NHH9 583 aa20.86■□□□□ 0.93
PDLIM5-205ENST00000380180 SLC2A14Q8TDB8 520 aa20.86■□□□□ 0.93
PDLIM5-205ENST00000380180 SENP8Q96LD8 212 aa20.86■□□□□ 0.93
PDLIM5-205ENST00000380180 FMO2Q99518 471 aa20.86■□□□□ 0.93
PDLIM5-205ENST00000380180 B3GNT5Q9BYG0 378 aa20.86■□□□□ 0.93
PDLIM5-205ENST00000380180 PCSK1NQ9UHG2 260 aa20.86■□□□□ 0.93
PDLIM5-205ENST00000380180 hCG_1818297A0A087WSY0 165 aa20.85■□□□□ 0.93
PDLIM5-205ENST00000380180 C3orf70A6NLC5 250 aaPredicted RBP20.85■□□□□ 0.93
PDLIM5-205ENST00000380180 PAPSS1O43252 624 aaPredicted RBP20.85■□□□□ 0.93
PDLIM5-205ENST00000380180 ATP2C2O75185 946 aa20.85■□□□□ 0.93
PDLIM5-205ENST00000380180 MIPP30301 263 aa20.85■□□□□ 0.93
PDLIM5-205ENST00000380180 PTPN7P35236 360 aa20.85■□□□□ 0.93
PDLIM5-205ENST00000380180 SNX16P57768 344 aa20.85■□□□□ 0.93
PDLIM5-205ENST00000380180 KRT17Q04695 432 aa20.85■□□□□ 0.93
PDLIM5-205ENST00000380180 SH3PXD2AQ5TCZ1 1133 aa20.85■□□□□ 0.93
PDLIM5-205ENST00000380180 B3GALNT2Q8NCR0 500 aa20.85■□□□□ 0.93
PDLIM5-205ENST00000380180 KHSRPQ92945 711 aaKnown RBP eCLIP20.85■□□□□ 0.931e-6■■■■□ 20.4
PDLIM5-205ENST00000380180 LRRC45Q96CN5 670 aa20.85■□□□□ 0.93
PDLIM5-205ENST00000380180 TSEN34Q9BSV6 310 aaKnown RBP20.85■□□□□ 0.93
PDLIM5-205ENST00000380180 CNPY3Q9BT09 278 aa20.85■□□□□ 0.93
PDLIM5-205ENST00000380180 TRPV6Q9H1D0 765 aa20.85■□□□□ 0.93
PDLIM5-205ENST00000380180 HMX1Q9NP08 348 aaPredicted RBP20.85■□□□□ 0.93
PDLIM5-205ENST00000380180 VPS18Q9P253 973 aa20.85■□□□□ 0.93
PDLIM5-205ENST00000380180 FEZ2Q9UHY8 353 aaPredicted RBP20.85■□□□□ 0.93
PDLIM5-205ENST00000380180 FAN1Q9Y2M0 1017 aa20.85■□□□□ 0.93
PDLIM5-205ENST00000380180 FAM163BP0C2L3 166 aa20.85■□□□□ 0.93
PDLIM5-205ENST00000380180 GYS2P54840 703 aa20.85■□□□□ 0.93
PDLIM5-205ENST00000380180 GABPB1Q06547 395 aaPredicted RBP20.85■□□□□ 0.93
PDLIM5-205ENST00000380180 C3orf58Q8NDZ4 430 aa20.85■□□□□ 0.93
PDLIM5-205ENST00000380180 FBXO25Q8TCJ0 367 aa20.85■□□□□ 0.93
PDLIM5-205ENST00000380180 GRK7Q8WTQ7 553 aa20.85■□□□□ 0.93
PDLIM5-205ENST00000380180 RSAD1Q9HA92 442 aa20.85■□□□□ 0.93
PDLIM5-205ENST00000380180 USP18Q9UMW8 372 aa20.85■□□□□ 0.93
PDLIM5-205ENST00000380180 GABRDO14764 452 aa20.84■□□□□ 0.93
PDLIM5-205ENST00000380180 TRUB2O95900 331 aaKnown RBP20.84■□□□□ 0.93
PDLIM5-205ENST00000380180 CKBP12277 381 aa20.84■□□□□ 0.93
PDLIM5-205ENST00000380180 ACAT1P24752 427 aaKnown RBP20.84■□□□□ 0.93
PDLIM5-205ENST00000380180 HSD17B3P37058 310 aa20.84■□□□□ 0.93
PDLIM5-205ENST00000380180 C15orf59Q2T9L4 293 aaPredicted RBP20.84■□□□□ 0.93
PDLIM5-205ENST00000380180 TMC3Q7Z5M5 1100 aa20.84■□□□□ 0.93
PDLIM5-205ENST00000380180 CCDC114Q96M63 670 aa20.84■□□□□ 0.93
PDLIM5-205ENST00000380180 PAAF1Q9BRP4 392 aa20.84■□□□□ 0.93
PDLIM5-205ENST00000380180 SQORQ9Y6N5 450 aa20.84■□□□□ 0.93
PDLIM5-205ENST00000380180 A0A1W2PQ45 241 aaPredicted RBP20.83■□□□□ 0.93
PDLIM5-205ENST00000380180 A0A1W2PQY0 241 aa20.83■□□□□ 0.93
PDLIM5-205ENST00000380180 CASTOR2A6NHX0 329 aa20.83■□□□□ 0.93
PDLIM5-205ENST00000380180 RNF40O75150 1001 aa20.83■□□□□ 0.93
PDLIM5-205ENST00000380180 PTPN1P18031 435 aaKnown RBP20.83■□□□□ 0.93
PDLIM5-205ENST00000380180 KDELR1P24390 212 aa20.83■□□□□ 0.93
PDLIM5-205ENST00000380180 TKTP29401 623 aaKnown RBP20.83■□□□□ 0.93
PDLIM5-205ENST00000380180 GBP1P32455 592 aa20.83■□□□□ 0.93
PDLIM5-205ENST00000380180 PCK1P35558 622 aa20.83■□□□□ 0.93
PDLIM5-205ENST00000380180 DHX9Q08211 1270 aaKnown RBP20.83■□□□□ 0.93
PDLIM5-205ENST00000380180 UAP1Q16222 522 aaPredicted RBP20.83■□□□□ 0.93
PDLIM5-205ENST00000380180 CCDC142Q17RM4 750 aa20.83■□□□□ 0.93
PDLIM5-205ENST00000380180 RAB6CQ53S08 254 aa20.83■□□□□ 0.93
PDLIM5-205ENST00000380180 ZDHHC17Q8IUH5 632 aa20.83■□□□□ 0.93
PDLIM5-205ENST00000380180 SLAIN1Q8ND83 568 aa20.83■□□□□ 0.93
PDLIM5-205ENST00000380180 ZNF296Q8WUU4 475 aaPredicted RBP20.83■□□□□ 0.93
PDLIM5-205ENST00000380180 CFAP57Q96MR6 1250 aa20.83■□□□□ 0.93
PDLIM5-205ENST00000380180 RUFY1Q96T51 708 aa20.83■□□□□ 0.93
PDLIM5-205ENST00000380180 SH3GL2Q99962 352 aa20.83■□□□□ 0.93
PDLIM5-205ENST00000380180 RAB6CQ9H0N0 254 aa20.83■□□□□ 0.93
PDLIM5-205ENST00000380180 FKTNO75072 461 aa20.83■□□□□ 0.92
PDLIM5-205ENST00000380180 GAS8O95995 478 aa20.83■□□□□ 0.92
PDLIM5-205ENST00000380180 POMCP01189 267 aa20.83■□□□□ 0.92
PDLIM5-205ENST00000380180 RPL9P32969 192 aaKnown RBP20.83■□□□□ 0.92
PDLIM5-205ENST00000380180 RPL34P49207 117 aaKnown RBP20.83■□□□□ 0.92
PDLIM5-205ENST00000380180 UPP1Q16831 310 aa20.83■□□□□ 0.92
PDLIM5-205ENST00000380180 CCDC14Q49A88 953 aa20.83■□□□□ 0.92
PDLIM5-205ENST00000380180 SYDE1Q6ZW31 735 aaPredicted RBP20.83■□□□□ 0.92
PDLIM5-205ENST00000380180 FUKQ8N0W3 1084 aa20.83■□□□□ 0.92
PDLIM5-205ENST00000380180 HNRNPABQ99729 332 aaKnown RBP20.83■□□□□ 0.92
PDLIM5-205ENST00000380180 GRK4P32298 578 aa20.82■□□□□ 0.92
PDLIM5-205ENST00000380180 CDO1Q16878 200 aa20.82■□□□□ 0.92
PDLIM5-205ENST00000380180 KIAA0319Q5VV43 1072 aa20.82■□□□□ 0.92
PDLIM5-205ENST00000380180 CMASQ8NFW8 434 aaPredicted RBP20.82■□□□□ 0.92
PDLIM5-205ENST00000380180 CLEC4CQ8WTT0 213 aa20.82■□□□□ 0.92
PDLIM5-205ENST00000380180 ART4Q93070 314 aa20.82■□□□□ 0.92
PDLIM5-205ENST00000380180 PGBD4Q96DM1 585 aa20.82■□□□□ 0.92
PDLIM5-205ENST00000380180 PEBP4Q96S96 227 aa20.82■□□□□ 0.92
PDLIM5-205ENST00000380180 STARD7Q9NQZ5 370 aa20.82■□□□□ 0.92
PDLIM5-205ENST00000380180 DDX43Q9NXZ2 648 aaKnown RBP20.82■□□□□ 0.92
PDLIM5-205ENST00000380180 OPA1O60313 960 aa20.82■□□□□ 0.92
PDLIM5-205ENST00000380180 CAND2O75155 1236 aa20.82■□□□□ 0.92
PDLIM5-205ENST00000380180 LCP1P13796 627 aa20.82■□□□□ 0.92
PDLIM5-205ENST00000380180 HTRA3P83110 453 aa20.82■□□□□ 0.92
PDLIM5-205ENST00000380180 ATP11AP98196 1134 aa20.82■□□□□ 0.92
PDLIM5-205ENST00000380180 PTK6Q13882 451 aa20.82■□□□□ 0.92
PDLIM5-205ENST00000380180 TERF2Q15554 542 aa20.82■□□□□ 0.92
PDLIM5-205ENST00000380180 TRIP13Q15645 432 aaPredicted RBP20.82■□□□□ 0.92
PDLIM5-205ENST00000380180 DSTYKQ6XUX3 929 aa20.82■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms