RNA–Protein interactions for RNA: ENST00000379826.4

SMAD9-202, Transcript of SMAD family member 9, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMAD9, Length 5,592 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-202ENST00000379826 TAF1P21675 1872 aa11.87□□□□□ -0.51
SMAD9-202ENST00000379826 CCDC78A2IDD5 438 aa11.87□□□□□ -0.51
SMAD9-202ENST00000379826 MANSC4A6NHS7 340 aaPredicted RBP11.87□□□□□ -0.51
SMAD9-202ENST00000379826 CREB3O43889 395 aa11.87□□□□□ -0.51
SMAD9-202ENST00000379826 PRKCBP05771 671 aa11.87□□□□□ -0.51
SMAD9-202ENST00000379826 SRGAP2BP0DMP2 458 aa11.87□□□□□ -0.51
SMAD9-202ENST00000379826 MAPTP10636 758 aaKnown RBP11.87□□□□□ -0.51
SMAD9-202ENST00000379826 PDGFRAP16234 1089 aa11.87□□□□□ -0.51
SMAD9-202ENST00000379826 HMGCS2P54868 508 aa11.87□□□□□ -0.51
SMAD9-202ENST00000379826 C4orf19Q8IY42 314 aa11.87□□□□□ -0.51
SMAD9-202ENST00000379826 ICA1LQ8NDH6 482 aa11.87□□□□□ -0.51
SMAD9-202ENST00000379826 FAM13CQ8NE31 585 aa11.87□□□□□ -0.51
SMAD9-202ENST00000379826 SYTL5Q8TDW5 730 aaPredicted RBP11.87□□□□□ -0.51
SMAD9-202ENST00000379826 ATG4CQ96DT6 458 aa11.87□□□□□ -0.51
SMAD9-202ENST00000379826 PXMP2Q9NR77 195 aa11.87□□□□□ -0.51
SMAD9-202ENST00000379826 FBXO6Q9NRD1 293 aaPredicted RBP11.87□□□□□ -0.51
SMAD9-202ENST00000379826 PAPOLBQ9NRJ5 636 aaKnown RBP11.87□□□□□ -0.51
SMAD9-202ENST00000379826 COL18A1P39060 1754 aa11.87□□□□□ -0.51
SMAD9-202ENST00000379826 MAGEA13PA6NCF6 341 aa11.86□□□□□ -0.51
SMAD9-202ENST00000379826 FCHO1O14526 889 aa11.86□□□□□ -0.51
SMAD9-202ENST00000379826 DGKIO75912 1065 aa11.86□□□□□ -0.51
SMAD9-202ENST00000379826 ITGB5P18084 799 aa11.86□□□□□ -0.51
SMAD9-202ENST00000379826 ARL4AP40617 200 aa11.86□□□□□ -0.51
SMAD9-202ENST00000379826 ACTR2P61160 394 aa11.86□□□□□ -0.51
SMAD9-202ENST00000379826 ART3Q13508 389 aa11.86□□□□□ -0.51
SMAD9-202ENST00000379826 ALYREFQ86V81 257 aaKnown RBP11.86□□□□□ -0.51
SMAD9-202ENST00000379826 ALLCQ8N6M5 410 aa11.86□□□□□ -0.51
SMAD9-202ENST00000379826 CEP70Q8NHQ1 597 aa11.86□□□□□ -0.51
SMAD9-202ENST00000379826 PIH1D1Q9NWS0 290 aaKnown RBP11.86□□□□□ -0.51
SMAD9-202ENST00000379826 SLIT2O94813 1529 aa11.86□□□□□ -0.51
SMAD9-202ENST00000379826 SNRPAP09012 282 aaKnown RBP11.86□□□□□ -0.51
SMAD9-202ENST00000379826 TDRD10Q5VZ19 366 aaKnown RBP11.86□□□□□ -0.51
SMAD9-202ENST00000379826 RFWD3Q6PCD5 774 aa11.86□□□□□ -0.51
SMAD9-202ENST00000379826 SAMD7Q7Z3H4 446 aa11.86□□□□□ -0.51
SMAD9-202ENST00000379826 TRABD2AQ86V40 505 aa11.86□□□□□ -0.51
SMAD9-202ENST00000379826 MAP4K3Q8IVH8 894 aa11.86□□□□□ -0.51
SMAD9-202ENST00000379826 ADORA2BP29275 332 aa11.86□□□□□ -0.51
SMAD9-202ENST00000379826 SLC34A1Q06495 639 aa11.86□□□□□ -0.51
SMAD9-202ENST00000379826 SLC9A9Q8IVB4 645 aa11.86□□□□□ -0.51
SMAD9-202ENST00000379826 OR6B3Q8NGW1 331 aa11.86□□□□□ -0.51
SMAD9-202ENST00000379826 FAM151AQ8WW52 585 aa11.86□□□□□ -0.51
SMAD9-202ENST00000379826 ZNF606Q8WXB4 792 aa11.86□□□□□ -0.51
SMAD9-202ENST00000379826 INPP5DQ92835 1189 aa11.86□□□□□ -0.51
SMAD9-202ENST00000379826 ZNF570Q96NI8 536 aa11.86□□□□□ -0.51
SMAD9-202ENST00000379826 POLIQ9UNA4 740 aa11.86□□□□□ -0.51
SMAD9-202ENST00000379826 SEC23IPQ9Y6Y8 1000 aaKnown RBP11.86□□□□□ -0.51
SMAD9-202ENST00000379826 TM9SF1O15321 606 aa11.86□□□□□ -0.51
SMAD9-202ENST00000379826 LCP1P13796 627 aa11.86□□□□□ -0.51
SMAD9-202ENST00000379826 GCNT1Q02742 428 aa11.86□□□□□ -0.51
SMAD9-202ENST00000379826 SGSM1Q2NKQ1 1148 aa11.86□□□□□ -0.51
SMAD9-202ENST00000379826 XKR3Q5GH77 459 aa11.86□□□□□ -0.51
SMAD9-202ENST00000379826 HEATR6Q6AI08 1181 aaKnown RBP11.86□□□□□ -0.51
SMAD9-202ENST00000379826 TTC30AQ86WT1 665 aa11.86□□□□□ -0.51
SMAD9-202ENST00000379826 ANKRD13AQ8IZ07 590 aa11.86□□□□□ -0.51
SMAD9-202ENST00000379826 CEP120Q8N960 986 aa11.86□□□□□ -0.51
SMAD9-202ENST00000379826 TMEM161BQ8NDZ6 487 aa11.86□□□□□ -0.51
SMAD9-202ENST00000379826 RNF208Q9H0X6 261 aa11.86□□□□□ -0.51
SMAD9-202ENST00000379826 PIDD1Q9HB75 910 aa11.86□□□□□ -0.51
SMAD9-202ENST00000379826 ARL8BQ9NVJ2 186 aa11.86□□□□□ -0.51
SMAD9-202ENST00000379826 ATP11BQ9Y2G3 1177 aa11.86□□□□□ -0.51
SMAD9-202ENST00000379826 DOT1LQ8TEK3 1739 aa11.86□□□□□ -0.51
SMAD9-202ENST00000379826 WDR46O15213 610 aaKnown RBP11.86□□□□□ -0.51
SMAD9-202ENST00000379826 PSMG1O95456 288 aa11.86□□□□□ -0.51
SMAD9-202ENST00000379826 SDC4P31431 198 aa11.86□□□□□ -0.51
SMAD9-202ENST00000379826 RIPK1Q13546 671 aa11.86□□□□□ -0.51
SMAD9-202ENST00000379826 PDK4Q16654 411 aa11.86□□□□□ -0.51
SMAD9-202ENST00000379826 SH3BP5LQ7L8J4 393 aa11.86□□□□□ -0.51
SMAD9-202ENST00000379826 FAM228AQ86W67 206 aa11.86□□□□□ -0.51
SMAD9-202ENST00000379826 ZC3H3Q8IXZ2 948 aaKnown RBP11.86□□□□□ -0.51
SMAD9-202ENST00000379826 HELQQ8TDG4 1101 aa11.86□□□□□ -0.51
SMAD9-202ENST00000379826 DDX50Q9BQ39 737 aaKnown RBP11.86□□□□□ -0.51
SMAD9-202ENST00000379826 NIF3L1Q9GZT8 377 aa11.86□□□□□ -0.51
SMAD9-202ENST00000379826 PLIN4Q96Q06 1357 aa11.85□□□□□ -0.51
SMAD9-202ENST00000379826 A0A1B0GUL6 1792 aa11.85□□□□□ -0.51
SMAD9-202ENST00000379826 CRCPO75575 148 aa11.85□□□□□ -0.51
SMAD9-202ENST00000379826 ACADSP16219 412 aa11.85□□□□□ -0.51
SMAD9-202ENST00000379826 GLRA2P23416 452 aa11.85□□□□□ -0.51
SMAD9-202ENST00000379826 SLC12A2P55011 1212 aa11.85□□□□□ -0.51
SMAD9-202ENST00000379826 SURF1Q15526 300 aa11.85□□□□□ -0.51
SMAD9-202ENST00000379826 RABGAP1LQ5R372 815 aa11.85□□□□□ -0.51
SMAD9-202ENST00000379826 RINLQ6ZS11 566 aa11.85□□□□□ -0.51
SMAD9-202ENST00000379826 PPWD1Q96BP3 646 aaKnown RBP11.85□□□□□ -0.51
SMAD9-202ENST00000379826 PCDH9Q9HC56 1237 aa11.85□□□□□ -0.51
SMAD9-202ENST00000379826 AVENQ9NQS1 362 aaPredicted RBP11.85□□□□□ -0.51
SMAD9-202ENST00000379826 DNAL1Q4LDG9 190 aa11.85□□□□□ -0.51
SMAD9-202ENST00000379826 USP50Q70EL3 339 aaPredicted RBP11.85□□□□□ -0.51
SMAD9-202ENST00000379826 PPCSQ9HAB8 311 aa11.85□□□□□ -0.51
SMAD9-202ENST00000379826 CISHQ9NSE2 258 aa11.85□□□□□ -0.51
SMAD9-202ENST00000379826 AVILO75366 819 aa11.85□□□□□ -0.51
SMAD9-202ENST00000379826 CDK16Q00536 496 aa11.85□□□□□ -0.51
SMAD9-202ENST00000379826 TRIP10Q15642 601 aa11.85□□□□□ -0.51
SMAD9-202ENST00000379826 CGRRF1Q99675 332 aa11.85□□□□□ -0.51
SMAD9-202ENST00000379826 C2CD2Q9Y426 696 aa11.85□□□□□ -0.51
SMAD9-202ENST00000379826 NAV1Q8NEY1 1877 aa11.85□□□□□ -0.51
SMAD9-202ENST00000379826 GARTP22102 1010 aa11.85□□□□□ -0.51
SMAD9-202ENST00000379826 TYK2P29597 1187 aa11.85□□□□□ -0.51
SMAD9-202ENST00000379826 TPD52P55327 224 aaPredicted RBP11.85□□□□□ -0.51
SMAD9-202ENST00000379826 MED21Q13503 144 aa11.85□□□□□ -0.51
SMAD9-202ENST00000379826 NBPF20Q3BBV1 942 aa11.85□□□□□ -0.51
SMAD9-202ENST00000379826 FNBP1LQ5T0N5 605 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms