RNA–Protein interactions for RNA: ENST00000377861.4

PCDH9-201, Transcript of protocadherin 9, humanhuman

TSL 1 (best) BASIC

Gene PCDH9, Length 28,227 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-201ENST00000377861 GJA10Q969M2 543 aa5.13□□□□□ -1.59
PCDH9-201ENST00000377861 FAM167BQ9BTA0 163 aa5.13□□□□□ -1.59
PCDH9-201ENST00000377861 XRN2Q9H0D6 950 aaKnown RBP eCLIP5.13□□□□□ -1.59
PCDH9-201ENST00000377861 PCDHGB4Q9UN71 923 aa5.13□□□□□ -1.59
PCDH9-201ENST00000377861 TMEM127O75204 238 aa5.13□□□□□ -1.59
PCDH9-201ENST00000377861 HSPA4LO95757 839 aa5.13□□□□□ -1.59
PCDH9-201ENST00000377861 FBLN1P23142 703 aa5.13□□□□□ -1.59
PCDH9-201ENST00000377861 TXNL4AP83876 142 aaKnown RBP5.13□□□□□ -1.59
PCDH9-201ENST00000377861 TTLL4Q14679 1199 aa5.13□□□□□ -1.59
PCDH9-201ENST00000377861 EPHA10Q5JZY3 1008 aa5.13□□□□□ -1.59
PCDH9-201ENST00000377861 PAF1Q8N7H5 531 aa5.13□□□□□ -1.59
PCDH9-201ENST00000377861 MTMR14Q8NCE2 650 aa5.13□□□□□ -1.59
PCDH9-201ENST00000377861 C15orf40Q8WUR7 153 aa5.13□□□□□ -1.59
PCDH9-201ENST00000377861 SHC3Q92529 594 aa5.13□□□□□ -1.59
PCDH9-201ENST00000377861 SUCOQ9UBS9 1254 aaKnown RBP5.13□□□□□ -1.59
PCDH9-201ENST00000377861 PLSCR1O15162 318 aa5.13□□□□□ -1.59
PCDH9-201ENST00000377861 PCYT1AP49585 367 aa5.13□□□□□ -1.59
PCDH9-201ENST00000377861 ARSEP51690 589 aa5.13□□□□□ -1.59
PCDH9-201ENST00000377861 SMU1Q2TAY7 513 aa5.13□□□□□ -1.59
PCDH9-201ENST00000377861 BBS12Q6ZW61 710 aa5.13□□□□□ -1.59
PCDH9-201ENST00000377861 BRINP3Q76B58 766 aa5.13□□□□□ -1.59
PCDH9-201ENST00000377861 PROSER1Q86XN7 944 aa5.13□□□□□ -1.59
PCDH9-201ENST00000377861 TBC1D19Q8N5T2 526 aa5.13□□□□□ -1.59
PCDH9-201ENST00000377861 ERCC6L2Q5T890 1561 aa5.13□□□□□ -1.59
PCDH9-201ENST00000377861 ANGPT2O15123 496 aa5.13□□□□□ -1.59
PCDH9-201ENST00000377861 SYF2O95926 243 aaKnown RBP5.13□□□□□ -1.59
PCDH9-201ENST00000377861 PDCLQ13371 301 aa5.13□□□□□ -1.59
PCDH9-201ENST00000377861 UBE2R2Q712K3 238 aaPredicted RBP5.13□□□□□ -1.59
PCDH9-201ENST00000377861 ZNF410Q86VK4 478 aa5.13□□□□□ -1.59
PCDH9-201ENST00000377861 MPP5Q8N3R9 675 aa5.13□□□□□ -1.59
PCDH9-201ENST00000377861 SHROOM2Q13796 1616 aa5.13□□□□□ -1.59
PCDH9-201ENST00000377861 MORF4L1Q9UBU8 362 aa5.13□□□□□ -1.59
PCDH9-201ENST00000377861 GJB6O95452 261 aa5.13□□□□□ -1.59
PCDH9-201ENST00000377861 RPL9P32969 192 aaKnown RBP5.13□□□□□ -1.59
PCDH9-201ENST00000377861 RGS4P49798 205 aa5.13□□□□□ -1.59
PCDH9-201ENST00000377861 MROH9Q5TGP6 573 aa5.13□□□□□ -1.59
PCDH9-201ENST00000377861 HDDC2Q7Z4H3 204 aa5.13□□□□□ -1.59
PCDH9-201ENST00000377861 AMER2Q8N7J2 671 aa5.13□□□□□ -1.59
PCDH9-201ENST00000377861 SETD9Q8NE22 299 aa5.13□□□□□ -1.59
PCDH9-201ENST00000377861 EVPLLA8MZ36 301 aa5.13□□□□□ -1.59
PCDH9-201ENST00000377861 ROR1Q01973 937 aa5.13□□□□□ -1.59
PCDH9-201ENST00000377861 MAMLD1Q13495 774 aa5.13□□□□□ -1.59
PCDH9-201ENST00000377861 GALNT13Q8IUC8 556 aa5.13□□□□□ -1.59
PCDH9-201ENST00000377861 APOPT1Q96IL0 206 aa5.13□□□□□ -1.59
PCDH9-201ENST00000377861 AGPAT5Q9NUQ2 364 aa5.13□□□□□ -1.59
PCDH9-201ENST00000377861 KLRG2A4D1S0 409 aaPredicted RBP5.13□□□□□ -1.59
PCDH9-201ENST00000377861 GPS1Q13098 491 aa5.13□□□□□ -1.59
PCDH9-201ENST00000377861 IRF2BP1Q8IU81 584 aa5.13□□□□□ -1.59
PCDH9-201ENST00000377861 DNAAF3Q8N9W5 541 aa5.13□□□□□ -1.59
PCDH9-201ENST00000377861 RAPGEF5Q92565 580 aa5.13□□□□□ -1.59
PCDH9-201ENST00000377861 FKBP10Q96AY3 582 aa5.13□□□□□ -1.59
PCDH9-201ENST00000377861 IRS2Q9Y4H2 1338 aa5.13□□□□□ -1.59
PCDH9-201ENST00000377861 CCDC160A6NGH7 325 aa5.13□□□□□ -1.59
PCDH9-201ENST00000377861 FAM177BA6PVY3 158 aa5.13□□□□□ -1.59
PCDH9-201ENST00000377861 TBC1D21Q8IYX1 336 aa5.13□□□□□ -1.59
PCDH9-201ENST00000377861 HUS1O60921 280 aa5.12□□□□□ -1.59
PCDH9-201ENST00000377861 CCDC92Q53HC0 331 aaPredicted RBP5.12□□□□□ -1.59
PCDH9-201ENST00000377861 BNC2Q6ZN30 1099 aaPredicted RBP5.12□□□□□ -1.59
PCDH9-201ENST00000377861 C1orf186Q6ZWK4 172 aa5.12□□□□□ -1.59
PCDH9-201ENST00000377861 APPL2Q8NEU8 664 aa5.12□□□□□ -1.59
PCDH9-201ENST00000377861 PRRG3Q9BZD7 231 aa5.12□□□□□ -1.59
PCDH9-201ENST00000377861 PRKAG2Q9UGJ0 569 aa5.12□□□□□ -1.59
PCDH9-201ENST00000377861 MPZL2O60487 215 aa5.12□□□□□ -1.59
PCDH9-201ENST00000377861 RPL3P39023 403 aaKnown RBP5.12□□□□□ -1.59
PCDH9-201ENST00000377861 EXOC3L1Q86VI1 746 aa5.12□□□□□ -1.59
PCDH9-201ENST00000377861 STK40Q8N2I9 435 aa5.12□□□□□ -1.59
PCDH9-201ENST00000377861 MTMR8Q96EF0 704 aa5.12□□□□□ -1.59
PCDH9-201ENST00000377861 FAM47AQ5JRC9 791 aa5.12□□□□□ -1.59
PCDH9-201ENST00000377861 TTBK2Q6IQ55 1244 aa5.12□□□□□ -1.59
PCDH9-201ENST00000377861 PI16Q6UXB8 463 aa5.12□□□□□ -1.59
PCDH9-201ENST00000377861 SFRP1Q8N474 314 aa5.12□□□□□ -1.59
PCDH9-201ENST00000377861 PPARGC1AQ9UBK2 798 aaKnown RBP5.12□□□□□ -1.59
PCDH9-201ENST00000377861 ZSCAN5CA6NGD5 496 aaPredicted RBP5.12□□□□□ -1.59
PCDH9-201ENST00000377861 ATP1A2P50993 1020 aa5.12□□□□□ -1.59
PCDH9-201ENST00000377861 TMEM86AQ8N2M4 240 aa5.12□□□□□ -1.59
PCDH9-201ENST00000377861 ELMOD1Q8N336 334 aa5.12□□□□□ -1.59
PCDH9-201ENST00000377861 LRRC52Q8N7C0 313 aa5.12□□□□□ -1.59
PCDH9-201ENST00000377861 CASP10Q92851 521 aa5.12□□□□□ -1.59
PCDH9-201ENST00000377861 ADGRE3Q9BY15 652 aa5.12□□□□□ -1.59
PCDH9-201ENST00000377861 JPH1Q9HDC5 661 aaPredicted RBP5.12□□□□□ -1.59
PCDH9-201ENST00000377861 CORO2BQ9UQ03 480 aa5.12□□□□□ -1.59
PCDH9-201ENST00000377861 IRGMA1A4Y4 181 aa5.12□□□□□ -1.59
PCDH9-201ENST00000377861 RFX8Q6ZV50 586 aa5.12□□□□□ -1.59
PCDH9-201ENST00000377861 ZNF670Q9BS34 389 aa5.12□□□□□ -1.59
PCDH9-201ENST00000377861 UGT2B28Q9BY64 529 aa5.12□□□□□ -1.59
PCDH9-201ENST00000377861 ABCC6O95255 1503 aa5.12□□□□□ -1.59
PCDH9-201ENST00000377861 TTLL9Q3SXZ7 439 aa5.12□□□□□ -1.59
PCDH9-201ENST00000377861 PATL1Q86TB9 770 aaKnown RBP5.12□□□□□ -1.59
PCDH9-201ENST00000377861 EFHD2Q96C19 240 aaPredicted RBP5.12□□□□□ -1.59
PCDH9-201ENST00000377861 FAF2Q96CS3 445 aa5.12□□□□□ -1.59
PCDH9-201ENST00000377861 JMJD4Q9H9V9 463 aa5.12□□□□□ -1.59
PCDH9-201ENST00000377861 ADCY6O43306 1168 aa5.12□□□□□ -1.59
PCDH9-201ENST00000377861 PIK3CAP42336 1068 aa5.12□□□□□ -1.59
PCDH9-201ENST00000377861 SEMA6BQ9H3T3 888 aa5.12□□□□□ -1.59
PCDH9-201ENST00000377861 PNPLA8Q9NP80 782 aa5.12□□□□□ -1.59
PCDH9-201ENST00000377861 SPATA31A1Q5TZJ5 1347 aa5.12□□□□□ -1.59
PCDH9-201ENST00000377861 K7ENM7 598 aa5.12□□□□□ -1.59
PCDH9-201ENST00000377861 RXRBP28702 533 aa5.12□□□□□ -1.59
PCDH9-201ENST00000377861 ELAVL2Q12926 359 aaKnown RBP5.12□□□□□ -1.59
PCDH9-201ENST00000377861 INTS11Q5TA45 600 aaKnown RBP5.12□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms