RNA–Protein interactions for RNA: ENST00000377833.8

CUBN-202, Transcript of cubilin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CUBN, Length 11,949 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUBN-202ENST00000377833 RUBCNLQ9H714 662 aa6.23□□□□□ -1.41
CUBN-202ENST00000377833 L2HGDHQ9H9P8 463 aa6.23□□□□□ -1.41
CUBN-202ENST00000377833 VTA1Q9NP79 307 aa6.23□□□□□ -1.41
CUBN-202ENST00000377833 ZSWIM5Q9P217 1185 aa6.23□□□□□ -1.41
CUBN-202ENST00000377833 PCDHA6Q9UN73 950 aa6.23□□□□□ -1.41
CUBN-202ENST00000377833 PCDHB6Q9Y5E3 794 aa6.23□□□□□ -1.41
CUBN-202ENST00000377833 PCDHA8Q9Y5H6 950 aa6.23□□□□□ -1.41
CUBN-202ENST00000377833 IMPDH2P12268 514 aa6.23□□□□□ -1.41
CUBN-202ENST00000377833 CXCR2P25025 360 aa6.23□□□□□ -1.41
CUBN-202ENST00000377833 SREBF1P36956 1147 aa6.23□□□□□ -1.41
CUBN-202ENST00000377833 BEND6Q5SZJ8 279 aaPredicted RBP6.23□□□□□ -1.41
CUBN-202ENST00000377833 IZUMO3Q5VZ72 239 aa6.23□□□□□ -1.41
CUBN-202ENST00000377833 OSBP2Q969R2 916 aa6.23□□□□□ -1.41
CUBN-202ENST00000377833 HMG20AQ9NP66 347 aa6.23□□□□□ -1.41
CUBN-202ENST00000377833 KLHL28Q9NXS3 571 aa6.23□□□□□ -1.41
CUBN-202ENST00000377833 NDUFS3O75489 264 aa6.23□□□□□ -1.41
CUBN-202ENST00000377833 DAB1O75553 588 aa6.23□□□□□ -1.41
CUBN-202ENST00000377833 SRPRAP08240 638 aaKnown RBP6.23□□□□□ -1.41
CUBN-202ENST00000377833 ERCC2P18074 760 aa6.23□□□□□ -1.41
CUBN-202ENST00000377833 HMOX2P30519 316 aa6.23□□□□□ -1.41
CUBN-202ENST00000377833 ALDH7A1P49419 539 aaKnown RBP6.23□□□□□ -1.41
CUBN-202ENST00000377833 POTEHQ6S545 545 aa6.23□□□□□ -1.41
CUBN-202ENST00000377833 POTEGQ6S5H5 508 aa6.23□□□□□ -1.41
CUBN-202ENST00000377833 NEK10Q6ZWH5 1172 aa6.23□□□□□ -1.41
CUBN-202ENST00000377833 PLD3Q8IV08 490 aa6.23□□□□□ -1.41
CUBN-202ENST00000377833 ERP44Q9BS26 406 aa6.23□□□□□ -1.41
CUBN-202ENST00000377833 FTHL17Q9BXU8 183 aa6.23□□□□□ -1.41
CUBN-202ENST00000377833 NXF1Q9UBU9 619 aaKnown RBP6.23□□□□□ -1.41
CUBN-202ENST00000377833 SLC22A2O15244 555 aa6.23□□□□□ -1.41
CUBN-202ENST00000377833 CDH17Q12864 832 aa6.23□□□□□ -1.41
CUBN-202ENST00000377833 AP3S1Q92572 193 aa6.23□□□□□ -1.41
CUBN-202ENST00000377833 ZNF333Q96JL9 665 aa6.23□□□□□ -1.41
CUBN-202ENST00000377833 RGL1Q9NZL6 768 aa6.23□□□□□ -1.41
CUBN-202ENST00000377833 MINPP1Q9UNW1 487 aa6.23□□□□□ -1.41
CUBN-202ENST00000377833 COL1A1P02452 1464 aaPredicted RBP6.23□□□□□ -1.41
CUBN-202ENST00000377833 UNCXA6NJT0 531 aa6.23□□□□□ -1.41
CUBN-202ENST00000377833 POTECB2RU33 542 aa6.23□□□□□ -1.41
CUBN-202ENST00000377833 TSNQ15631 228 aaKnown RBP6.23□□□□□ -1.41
CUBN-202ENST00000377833 MAPK11Q15759 364 aa6.23□□□□□ -1.41
CUBN-202ENST00000377833 IRAK1BP1Q5VVH5 260 aa6.23□□□□□ -1.41
CUBN-202ENST00000377833 SCARA3Q6AZY7 606 aa6.23□□□□□ -1.41
CUBN-202ENST00000377833 HIBCHQ6NVY1 386 aaPredicted RBP6.23□□□□□ -1.41
CUBN-202ENST00000377833 ZPBP2Q6X784 338 aa6.23□□□□□ -1.41
CUBN-202ENST00000377833 ARCQ7LC44 396 aa6.23□□□□□ -1.41
CUBN-202ENST00000377833 CCDC60Q8IWA6 550 aaPredicted RBP6.23□□□□□ -1.41
CUBN-202ENST00000377833 ARRDC4Q8NCT1 418 aa6.23□□□□□ -1.41
CUBN-202ENST00000377833 UBP1Q9NZI7 540 aa6.23□□□□□ -1.41
CUBN-202ENST00000377833 SPDYE5A6NIY4 337 aa6.23□□□□□ -1.41
CUBN-202ENST00000377833 H3BNX3 289 aa6.23□□□□□ -1.41
CUBN-202ENST00000377833 CD58P19256 250 aa6.23□□□□□ -1.41
CUBN-202ENST00000377833 RNASE9P60153 205 aaKnown RBP6.23□□□□□ -1.41
CUBN-202ENST00000377833 QRICH1Q2TAL8 776 aa6.23□□□□□ -1.41
CUBN-202ENST00000377833 SPDYE7PQ495Y7 208 aa6.23□□□□□ -1.41
CUBN-202ENST00000377833 ARMCX4Q5H9R4 360 aa6.23□□□□□ -1.41
CUBN-202ENST00000377833 LPCAT2Q7L5N7 544 aa6.23□□□□□ -1.41
CUBN-202ENST00000377833 FAM151AQ8WW52 585 aa6.23□□□□□ -1.41
CUBN-202ENST00000377833 USP6NLQ92738 828 aa6.23□□□□□ -1.41
CUBN-202ENST00000377833 KLC4Q9NSK0 619 aa6.23□□□□□ -1.41
CUBN-202ENST00000377833 THG1LQ9NWX6 298 aaKnown RBP6.23□□□□□ -1.41
CUBN-202ENST00000377833 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.23□□□□□ -1.41
CUBN-202ENST00000377833 SQORQ9Y6N5 450 aa6.23□□□□□ -1.41
CUBN-202ENST00000377833 RBBP7Q16576 425 aa6.23□□□□□ -1.41
CUBN-202ENST00000377833 CPNE1Q99829 537 aa6.23□□□□□ -1.41
CUBN-202ENST00000377833 XRN2Q9H0D6 950 aaKnown RBP eCLIP6.23□□□□□ -1.41
CUBN-202ENST00000377833 COPG2Q9UBF2 871 aa6.23□□□□□ -1.41
CUBN-202ENST00000377833 KIF13AQ9H1H9 1805 aa6.23□□□□□ -1.41
CUBN-202ENST00000377833 CNTNAP2Q9UHC6 1331 aa6.23□□□□□ -1.41
CUBN-202ENST00000377833 CAND2O75155 1236 aa6.23□□□□□ -1.41
CUBN-202ENST00000377833 KRT6AP02538 564 aa6.23□□□□□ -1.41
CUBN-202ENST00000377833 ALBP02768 609 aa6.23□□□□□ -1.41
CUBN-202ENST00000377833 KRT6BP04259 564 aa6.23□□□□□ -1.41
CUBN-202ENST00000377833 PPM1AP35813 382 aa6.23□□□□□ -1.41
CUBN-202ENST00000377833 PGM1P36871 562 aa6.23□□□□□ -1.41
CUBN-202ENST00000377833 MDH1P40925 334 aaKnown RBP6.23□□□□□ -1.41
CUBN-202ENST00000377833 IFNAR2P48551 515 aa6.23□□□□□ -1.41
CUBN-202ENST00000377833 KRT6CP48668 564 aa6.23□□□□□ -1.41
CUBN-202ENST00000377833 PLOD1Q02809 727 aaPredicted RBP6.23□□□□□ -1.41
CUBN-202ENST00000377833 SH3BP5LQ7L8J4 393 aa6.23□□□□□ -1.41
CUBN-202ENST00000377833 TBC1D10CQ8IV04 446 aa6.23□□□□□ -1.41
CUBN-202ENST00000377833 ZNF510Q9Y2H8 683 aa6.23□□□□□ -1.41
CUBN-202ENST00000377833 COL1A2P08123 1366 aa6.23□□□□□ -1.41
CUBN-202ENST00000377833 FKBP6O75344 327 aa6.22□□□□□ -1.41
CUBN-202ENST00000377833 ABL1P00519 1130 aa6.22□□□□□ -1.41
CUBN-202ENST00000377833 SLC2A4P14672 509 aa6.22□□□□□ -1.41
CUBN-202ENST00000377833 AKT1P31749 480 aa6.22□□□□□ -1.41
CUBN-202ENST00000377833 MMRN1Q13201 1228 aa6.22□□□□□ -1.41
CUBN-202ENST00000377833 ATP6V0D2Q8N8Y2 350 aa6.22□□□□□ -1.41
CUBN-202ENST00000377833 TRPC4APQ8TEL6 797 aa6.22□□□□□ -1.41
CUBN-202ENST00000377833 PRMT6Q96LA8 375 aaPredicted RBP6.22□□□□□ -1.41
CUBN-202ENST00000377833 LRCH1Q9Y2L9 728 aa6.22□□□□□ -1.41
CUBN-202ENST00000377833 ASTN2O75129 1339 aaPredicted RBP6.22□□□□□ -1.41
CUBN-202ENST00000377833 NR3C2P08235 984 aa6.22□□□□□ -1.41
CUBN-202ENST00000377833 CYP2A6P11509 494 aaPredicted RBP6.22□□□□□ -1.41
CUBN-202ENST00000377833 ITGA2P17301 1181 aa6.22□□□□□ -1.41
CUBN-202ENST00000377833 ADORA1P30542 326 aa6.22□□□□□ -1.41
CUBN-202ENST00000377833 NUP62P37198 522 aaPredicted RBP6.22□□□□□ -1.41
CUBN-202ENST00000377833 SVOPQ8N4V2 548 aa6.22□□□□□ -1.41
CUBN-202ENST00000377833 OR6P1Q8NGX9 317 aa6.22□□□□□ -1.41
CUBN-202ENST00000377833 MOSPD2Q8NHP6 518 aa6.22□□□□□ -1.41
CUBN-202ENST00000377833 MRRFQ96E11 262 aaKnown RBP6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms