RNA–Protein interactions for RNA: ENST00000377387.5

SF1-203, Transcript of splicing factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SF1, Length 2,947 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-203ENST00000377387 FAM111AQ96PZ2 611 aa18.97■□□□□ 0.63
SF1-203ENST00000377387 ASCC2Q9H1I8 757 aaPredicted RBP18.97■□□□□ 0.63
SF1-203ENST00000377387 SMYD3Q9H7B4 428 aa18.97■□□□□ 0.63
SF1-203ENST00000377387 HOXC10Q9NYD6 342 aa18.97■□□□□ 0.63
SF1-203ENST00000377387 KRT7P08729 469 aa18.97■□□□□ 0.63
SF1-203ENST00000377387 SKIV2L2P42285 1042 aaKnown RBP18.97■□□□□ 0.63
SF1-203ENST00000377387 YWHAEP62258 255 aaKnown RBP18.97■□□□□ 0.63
SF1-203ENST00000377387 ZPBP2Q6X784 338 aa18.97■□□□□ 0.63
SF1-203ENST00000377387 PCGF5Q86SE9 256 aa18.97■□□□□ 0.63
SF1-203ENST00000377387 CTAGE3PQ8IX95 158 aa18.97■□□□□ 0.63
SF1-203ENST00000377387 CFAP36Q96G28 342 aa18.97■□□□□ 0.63
SF1-203ENST00000377387 SDCBP2Q9H190 292 aa18.97■□□□□ 0.63
SF1-203ENST00000377387 LRMDAQ9H2I8 198 aa18.97■□□□□ 0.63
SF1-203ENST00000377387 CPSF3Q9UKF6 684 aaKnown RBP18.97■□□□□ 0.63
SF1-203ENST00000377387 IKBKGQ9Y6K9 419 aa18.97■□□□□ 0.63
SF1-203ENST00000377387 RFC5P40937 340 aa18.96■□□□□ 0.63
SF1-203ENST00000377387 RAD23BP54727 409 aa18.96■□□□□ 0.63
SF1-203ENST00000377387 SESN3P58005 492 aa18.96■□□□□ 0.63
SF1-203ENST00000377387 ZNF280AP59817 542 aaPredicted RBP18.96■□□□□ 0.63
SF1-203ENST00000377387 HSDL1Q3SXM5 330 aa18.96■□□□□ 0.63
SF1-203ENST00000377387 KBTBD12Q3ZCT8 623 aa18.96■□□□□ 0.63
SF1-203ENST00000377387 BBS12Q6ZW61 710 aa18.96■□□□□ 0.63
SF1-203ENST00000377387 CCDC33Q8N5R6 958 aa18.96■□□□□ 0.63
SF1-203ENST00000377387 PRR11Q96HE9 360 aaPredicted RBP18.96■□□□□ 0.63
SF1-203ENST00000377387 ANKRD36BP1Q96IX9 119 aa18.96■□□□□ 0.63
SF1-203ENST00000377387 NUDCD1Q96RS6 583 aa18.96■□□□□ 0.63
SF1-203ENST00000377387 ZNF518BQ9C0D4 1074 aa18.96■□□□□ 0.63
SF1-203ENST00000377387 MANSC1Q9H8J5 431 aa18.96■□□□□ 0.63
SF1-203ENST00000377387 H7C0C1 242 aa18.96■□□□□ 0.63
SF1-203ENST00000377387 LPXNO60711 386 aa18.96■□□□□ 0.63
SF1-203ENST00000377387 MAFO75444 373 aaPredicted RBP18.96■□□□□ 0.63
SF1-203ENST00000377387 RNF8O76064 485 aa18.96■□□□□ 0.63
SF1-203ENST00000377387 ATP5OP48047 213 aa18.96■□□□□ 0.63
SF1-203ENST00000377387 TAP1Q03518 808 aa18.96■□□□□ 0.63
SF1-203ENST00000377387 ZBTB16Q05516 673 aa18.96■□□□□ 0.63
SF1-203ENST00000377387 FAAP100Q0VG06 881 aa18.96■□□□□ 0.63
SF1-203ENST00000377387 DPYSL3Q14195 570 aa18.96■□□□□ 0.63
SF1-203ENST00000377387 TAF11Q15544 211 aa18.96■□□□□ 0.63
SF1-203ENST00000377387 C15orf59Q2T9L4 293 aaPredicted RBP18.96■□□□□ 0.63
SF1-203ENST00000377387 FAM102AQ5T9C2 384 aaPredicted RBP18.96■□□□□ 0.63
SF1-203ENST00000377387 SCYL2Q6P3W7 929 aa18.96■□□□□ 0.63
SF1-203ENST00000377387 ADGRD1Q6QNK2 874 aa18.96■□□□□ 0.63
SF1-203ENST00000377387 ZBTB8OSQ8IWT0 167 aa18.96■□□□□ 0.63
SF1-203ENST00000377387 DCAKDQ8WVC6 231 aa18.96■□□□□ 0.63
SF1-203ENST00000377387 SERAC1Q96JX3 654 aa18.96■□□□□ 0.63
SF1-203ENST00000377387 ACSS3Q9H6R3 686 aa18.96■□□□□ 0.63
SF1-203ENST00000377387 FBXO6Q9NRD1 293 aaPredicted RBP18.96■□□□□ 0.63
SF1-203ENST00000377387 GPATCH2LQ9NWQ4 482 aa18.96■□□□□ 0.63
SF1-203ENST00000377387 HEY2Q9UBP5 337 aa18.96■□□□□ 0.63
SF1-203ENST00000377387 STRIP2Q9ULQ0 834 aa18.96■□□□□ 0.63
SF1-203ENST00000377387 M0QYV0 167 aa18.95■□□□□ 0.62
SF1-203ENST00000377387 MCF2LO15068 1137 aa18.95■□□□□ 0.62
SF1-203ENST00000377387 ZWINTO95229 277 aa18.95■□□□□ 0.62
SF1-203ENST00000377387 TROVE2P10155 538 aaKnown RBP eCLIP18.95■□□□□ 0.62
SF1-203ENST00000377387 CDH6P55285 790 aa18.95■□□□□ 0.62
SF1-203ENST00000377387 IGBP1P78318 339 aa18.95■□□□□ 0.62
SF1-203ENST00000377387 PTK7Q13308 1070 aa18.95■□□□□ 0.62
SF1-203ENST00000377387 ZNF667Q5HYK9 610 aa18.95■□□□□ 0.62
SF1-203ENST00000377387 TREML2Q5T2D2 321 aa18.95■□□□□ 0.62
SF1-203ENST00000377387 BZW1Q7L1Q6 419 aaKnown RBP18.95■□□□□ 0.62
SF1-203ENST00000377387 XYLT1Q86Y38 959 aa18.95■□□□□ 0.62
SF1-203ENST00000377387 KBTBD13C9JR72 458 aa18.95■□□□□ 0.62
SF1-203ENST00000377387 NFICP08651 508 aa18.95■□□□□ 0.62
SF1-203ENST00000377387 PYGBP11216 843 aa18.95■□□□□ 0.62
SF1-203ENST00000377387 ERFP50548 548 aa18.95■□□□□ 0.62
SF1-203ENST00000377387 CLCN3P51790 818 aa18.95■□□□□ 0.62
SF1-203ENST00000377387 FAM160B1Q5W0V3 765 aa18.95■□□□□ 0.62
SF1-203ENST00000377387 AGGF1Q8N302 714 aaeCLIP18.95■□□□□ 0.62
SF1-203ENST00000377387 SEPT1Q8WYJ6 367 aa18.95■□□□□ 0.62
SF1-203ENST00000377387 STAU2Q9NUL3 570 aaKnown RBP eCLIP18.95■□□□□ 0.62
SF1-203ENST00000377387 USP18Q9UMW8 372 aa18.95■□□□□ 0.62
SF1-203ENST00000377387 PCDHGC3Q9UN70 934 aa18.95■□□□□ 0.62
SF1-203ENST00000377387 HEY1Q9Y5J3 304 aa18.95■□□□□ 0.62
SF1-203ENST00000377387 PGK2P07205 417 aa18.94■□□□□ 0.62
SF1-203ENST00000377387 BGNP21810 368 aa18.94■□□□□ 0.62
SF1-203ENST00000377387 EFNA5P52803 228 aa18.94■□□□□ 0.62
SF1-203ENST00000377387 ATF7IP2Q5U623 682 aa18.94■□□□□ 0.62
SF1-203ENST00000377387 RFWD3Q6PCD5 774 aa18.94■□□□□ 0.62
SF1-203ENST00000377387 NIPA2Q8N8Q9 360 aa18.94■□□□□ 0.62
SF1-203ENST00000377387 MICAL1Q8TDZ2 1067 aa18.94■□□□□ 0.62
SF1-203ENST00000377387 PIWIL1Q96J94 861 aaKnown RBP18.94■□□□□ 0.62
SF1-203ENST00000377387 HEXIM2Q96MH2 286 aaKnown RBP18.94■□□□□ 0.62
SF1-203ENST00000377387 SLC5A4Q9NY91 659 aa18.94■□□□□ 0.62
SF1-203ENST00000377387 GGA3Q9NZ52 723 aa18.94■□□□□ 0.62
SF1-203ENST00000377387 KANSL3Q9P2N6 904 aa18.94■□□□□ 0.62
SF1-203ENST00000377387 ARIH2O95376 493 aa18.94■□□□□ 0.62
SF1-203ENST00000377387 ITGB3P05106 788 aa18.94■□□□□ 0.62
SF1-203ENST00000377387 AP3M2P53677 418 aa18.94■□□□□ 0.62
SF1-203ENST00000377387 KLHL38Q2WGJ6 581 aa18.94■□□□□ 0.62
SF1-203ENST00000377387 CLNKQ7Z7G1 428 aa18.94■□□□□ 0.62
SF1-203ENST00000377387 PRPF39Q86UA1 669 aaKnown RBP18.94■□□□□ 0.62
SF1-203ENST00000377387 BANPQ8N9N5 519 aa18.94■□□□□ 0.62
SF1-203ENST00000377387 PEBP4Q96S96 227 aa18.94■□□□□ 0.62
SF1-203ENST00000377387 ADPGKQ9BRR6 497 aa18.94■□□□□ 0.62
SF1-203ENST00000377387 MINDY3Q9H8M7 445 aa18.94■□□□□ 0.62
SF1-203ENST00000377387 BTBD7Q9P203 1132 aa18.94■□□□□ 0.62
SF1-203ENST00000377387 IGKV6D-21A0A0A0MT36 114 aa18.94■□□□□ 0.62
SF1-203ENST00000377387 SOWAHBA6NEL2 793 aa18.94■□□□□ 0.62
SF1-203ENST00000377387 C19orf81C9J6K1 198 aa18.94■□□□□ 0.62
SF1-203ENST00000377387 NOP56O00567 594 aaKnown RBP18.94■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms