RNA–Protein interactions for RNA: ENST00000376619.6

HDAC6-203, Transcript of histone deacetylase 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC6, Length 4,179 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-203ENST00000376619 ACO2Q99798 780 aaKnown RBP11.63□□□□□ -0.55
HDAC6-203ENST00000376619 GBA2Q9HCG7 927 aaPredicted RBP11.63□□□□□ -0.55
HDAC6-203ENST00000376619 DDIT4Q9NX09 232 aa11.63□□□□□ -0.55
HDAC6-203ENST00000376619 MYH7P12883 1935 aa11.63□□□□□ -0.55
HDAC6-203ENST00000376619 NDC80O14777 642 aa11.63□□□□□ -0.55
HDAC6-203ENST00000376619 ENDOD1O94919 500 aa11.63□□□□□ -0.55
HDAC6-203ENST00000376619 TTC4O95801 387 aa11.63□□□□□ -0.55
HDAC6-203ENST00000376619 SLC12A1Q13621 1099 aa11.63□□□□□ -0.55
HDAC6-203ENST00000376619 LRRC36Q1X8D7 754 aa11.63□□□□□ -0.55
HDAC6-203ENST00000376619 MYLK4Q86YV6 388 aaPredicted RBP11.63□□□□□ -0.55
HDAC6-203ENST00000376619 SUDS3Q9H7L9 328 aaPredicted RBP11.63□□□□□ -0.55
HDAC6-203ENST00000376619 ECT2Q9H8V3 914 aa11.63□□□□□ -0.55
HDAC6-203ENST00000376619 DDX20Q9UHI6 824 aaKnown RBP11.63□□□□□ -0.55
HDAC6-203ENST00000376619 ATRNL1Q5VV63 1379 aa11.63□□□□□ -0.55
HDAC6-203ENST00000376619 PEX19P40855 299 aa11.63□□□□□ -0.55
HDAC6-203ENST00000376619 WDR49Q8IV35 697 aa11.63□□□□□ -0.55
HDAC6-203ENST00000376619 ATP11CQ8NB49 1132 aa11.63□□□□□ -0.55
HDAC6-203ENST00000376619 ARMC2Q8NEN0 867 aa11.63□□□□□ -0.55
HDAC6-203ENST00000376619 LRRC37BQ96QE4 947 aa11.63□□□□□ -0.55
HDAC6-203ENST00000376619 C4AP0C0L4 1744 aa11.62□□□□□ -0.55
HDAC6-203ENST00000376619 CEP350Q5VT06 3117 aa11.62□□□□□ -0.55
HDAC6-203ENST00000376619 TULP2O00295 520 aa11.62□□□□□ -0.55
HDAC6-203ENST00000376619 ATP4AP20648 1035 aa11.62□□□□□ -0.55
HDAC6-203ENST00000376619 MUTP22033 750 aa11.62□□□□□ -0.55
HDAC6-203ENST00000376619 TARSP26639 723 aaKnown RBP11.62□□□□□ -0.55
HDAC6-203ENST00000376619 PTK7Q13308 1070 aa11.62□□□□□ -0.55
HDAC6-203ENST00000376619 KIAA1841Q6NSI8 718 aa11.62□□□□□ -0.55
HDAC6-203ENST00000376619 KDM7AQ6ZMT4 941 aa11.62□□□□□ -0.55
HDAC6-203ENST00000376619 USP50Q70EL3 339 aaPredicted RBP11.62□□□□□ -0.55
HDAC6-203ENST00000376619 RSPH3Q86UC2 560 aa11.62□□□□□ -0.55
HDAC6-203ENST00000376619 RIOX2Q8IUF8 465 aa11.62□□□□□ -0.55
HDAC6-203ENST00000376619 EXOC8Q8IYI6 725 aa11.62□□□□□ -0.55
HDAC6-203ENST00000376619 PDCD7Q8N8D1 485 aaKnown RBP11.62□□□□□ -0.55
HDAC6-203ENST00000376619 NINJ2Q9NZG7 142 aa11.62□□□□□ -0.55
HDAC6-203ENST00000376619 CPSF2Q9P2I0 782 aaKnown RBP11.62□□□□□ -0.55
HDAC6-203ENST00000376619 ARHGAP28Q9P2N2 729 aa11.62□□□□□ -0.55
HDAC6-203ENST00000376619 RBPJLQ9UBG7 517 aa11.62□□□□□ -0.55
HDAC6-203ENST00000376619 FAM8A1Q9UBU6 413 aa11.62□□□□□ -0.55
HDAC6-203ENST00000376619 NOCTQ9UK39 431 aaKnown RBP11.62□□□□□ -0.55
HDAC6-203ENST00000376619 LAMB4A4D0S4 1761 aa11.62□□□□□ -0.55
HDAC6-203ENST00000376619 TRIM49D1C9J1S8 452 aa11.62□□□□□ -0.55
HDAC6-203ENST00000376619 NEMP1O14524 444 aa11.62□□□□□ -0.55
HDAC6-203ENST00000376619 LCA5LO95447 670 aa11.62□□□□□ -0.55
HDAC6-203ENST00000376619 AGTP01019 485 aa11.62□□□□□ -0.55
HDAC6-203ENST00000376619 HMGCRP04035 888 aa11.62□□□□□ -0.55
HDAC6-203ENST00000376619 ANXA13P27216 316 aa11.62□□□□□ -0.55
HDAC6-203ENST00000376619 EPHB2P29323 1055 aa11.62□□□□□ -0.55
HDAC6-203ENST00000376619 MMP14P50281 582 aa11.62□□□□□ -0.55
HDAC6-203ENST00000376619 EFTUD2Q15029 972 aaKnown RBP eCLIP11.62□□□□□ -0.555e-7■■■■■ 27.2
HDAC6-203ENST00000376619 HABP4Q5JVS0 413 aaKnown RBP11.62□□□□□ -0.55
HDAC6-203ENST00000376619 SPATA21Q7Z572 469 aa11.62□□□□□ -0.55
HDAC6-203ENST00000376619 GPR20Q99678 358 aa11.62□□□□□ -0.55
HDAC6-203ENST00000376619 LRRC4CQ9HCJ2 640 aa11.62□□□□□ -0.55
HDAC6-203ENST00000376619 ABI2Q9NYB9 513 aaPredicted RBP11.62□□□□□ -0.55
HDAC6-203ENST00000376619 MAGEB2O15479 319 aa11.62□□□□□ -0.55
HDAC6-203ENST00000376619 VNN1O95497 513 aa11.62□□□□□ -0.55
HDAC6-203ENST00000376619 CETPP11597 493 aa11.62□□□□□ -0.55
HDAC6-203ENST00000376619 RBL1P28749 1068 aa11.62□□□□□ -0.55
HDAC6-203ENST00000376619 CDC25CP30307 473 aa11.62□□□□□ -0.55
HDAC6-203ENST00000376619 GRIK1P39086 918 aa11.62□□□□□ -0.55
HDAC6-203ENST00000376619 ELK3P41970 407 aa11.62□□□□□ -0.55
HDAC6-203ENST00000376619 ADIGQ0VDE8 80 aa11.62□□□□□ -0.55
HDAC6-203ENST00000376619 CCDC142Q17RM4 750 aa11.62□□□□□ -0.55
HDAC6-203ENST00000376619 DUPD1Q68J44 220 aa11.62□□□□□ -0.55
HDAC6-203ENST00000376619 ZCCHC23Q6ZST2 131 aa11.62□□□□□ -0.55
HDAC6-203ENST00000376619 STKLD1Q8NE28 680 aa11.62□□□□□ -0.55
HDAC6-203ENST00000376619 OR6P1Q8NGX9 317 aa11.62□□□□□ -0.55
HDAC6-203ENST00000376619 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.62□□□□□ -0.558e-10■■□□□ 12.3
HDAC6-203ENST00000376619 PABPC5Q96DU9 382 aaKnown RBP11.62□□□□□ -0.55
HDAC6-203ENST00000376619 LY75O60449 1722 aa11.62□□□□□ -0.55
HDAC6-203ENST00000376619 DIAPH2O60879 1101 aa11.61□□□□□ -0.55
HDAC6-203ENST00000376619 TGFB3P10600 412 aa11.61□□□□□ -0.55
HDAC6-203ENST00000376619 TYK2P29597 1187 aa11.61□□□□□ -0.55
HDAC6-203ENST00000376619 ETFBP38117 255 aa11.61□□□□□ -0.55
HDAC6-203ENST00000376619 ATN1P54259 1190 aaPredicted RBP11.61□□□□□ -0.55
HDAC6-203ENST00000376619 GAD2Q05329 585 aa11.61□□□□□ -0.55
HDAC6-203ENST00000376619 DEUP1Q05D60 604 aa11.61□□□□□ -0.55
HDAC6-203ENST00000376619 SDHAF4Q5VUM1 108 aa11.61□□□□□ -0.55
HDAC6-203ENST00000376619 CDKL2Q92772 493 aa11.61□□□□□ -0.55
HDAC6-203ENST00000376619 KAT2BQ92831 832 aa11.61□□□□□ -0.55
HDAC6-203ENST00000376619 MFSD14AQ96MC6 490 aa11.61□□□□□ -0.55
HDAC6-203ENST00000376619 TWNKQ96RR1 684 aa11.61□□□□□ -0.55
HDAC6-203ENST00000376619 VPS33BQ9H267 617 aa11.61□□□□□ -0.55
HDAC6-203ENST00000376619 TUBGCP4Q9UGJ1 667 aa11.61□□□□□ -0.55
HDAC6-203ENST00000376619 FAM47DPA6NHR8 397 aa11.61□□□□□ -0.55
HDAC6-203ENST00000376619 SLC26A4O43511 780 aa11.61□□□□□ -0.55
HDAC6-203ENST00000376619 MAFO75444 373 aaPredicted RBP11.61□□□□□ -0.55
HDAC6-203ENST00000376619 KRT37O76014 449 aa11.61□□□□□ -0.55
HDAC6-203ENST00000376619 C4BPAP04003 597 aaKnown RBP11.61□□□□□ -0.55
HDAC6-203ENST00000376619 FNTAP49354 379 aa11.61□□□□□ -0.55
HDAC6-203ENST00000376619 AARSP49588 968 aaKnown RBP eCLIP11.61□□□□□ -0.55
HDAC6-203ENST00000376619 UNC45BQ8IWX7 931 aa11.61□□□□□ -0.55
HDAC6-203ENST00000376619 NDUFAF2Q8N183 169 aa11.61□□□□□ -0.55
HDAC6-203ENST00000376619 GPR152Q8TDT2 470 aa11.61□□□□□ -0.55
HDAC6-203ENST00000376619 TRIM33Q9UPN9 1127 aa11.61□□□□□ -0.55
HDAC6-203ENST00000376619 CYB561D2O14569 222 aa11.61□□□□□ -0.55
HDAC6-203ENST00000376619 PPEF2O14830 753 aa11.61□□□□□ -0.55
HDAC6-203ENST00000376619 PMPCBO75439 489 aa11.61□□□□□ -0.55
HDAC6-203ENST00000376619 ESRRAP11474 423 aaPredicted RBP11.61□□□□□ -0.55
HDAC6-203ENST00000376619 OR1G1P47890 313 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms