RNA–Protein interactions for RNA: ENST00000374949.2

HLA-DQA1-202, Transcript of major histocompatibility complex, class II, DQ alpha 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DQA1, Length 1,060 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1-202ENST00000374949 MAP1BP46821 2468 aaKnown RBP11.66□□□□□ -0.54
HLA-DQA1-202ENST00000374949 CHD8Q9HCK8 2581 aa11.65□□□□□ -0.54
HLA-DQA1-202ENST00000374949 SHISA7A6NL88 538 aa11.65□□□□□ -0.54
HLA-DQA1-202ENST00000374949 TMEM189-UBE2V1I3L0A0 370 aa11.65□□□□□ -0.54
HLA-DQA1-202ENST00000374949 MEFVO15553 781 aaPredicted RBP11.65□□□□□ -0.54
HLA-DQA1-202ENST00000374949 ZSCAN12O43309 604 aa11.65□□□□□ -0.54
HLA-DQA1-202ENST00000374949 ZNF500O60304 480 aaPredicted RBP11.65□□□□□ -0.54
HLA-DQA1-202ENST00000374949 ECI2O75521 394 aa11.65□□□□□ -0.54
HLA-DQA1-202ENST00000374949 FCARP24071 287 aa11.65□□□□□ -0.54
HLA-DQA1-202ENST00000374949 SOX5P35711 763 aa11.65□□□□□ -0.54
HLA-DQA1-202ENST00000374949 EIF4A3P38919 411 aaKnown RBP11.65□□□□□ -0.54
HLA-DQA1-202ENST00000374949 MAGEA9P43362 315 aa11.65□□□□□ -0.54
HLA-DQA1-202ENST00000374949 BRCC3P46736 316 aa11.65□□□□□ -0.54
HLA-DQA1-202ENST00000374949 GCNT1Q02742 428 aa11.65□□□□□ -0.54
HLA-DQA1-202ENST00000374949 KLHL30Q0D2K2 578 aa11.65□□□□□ -0.54
HLA-DQA1-202ENST00000374949 GRM2Q14416 872 aa11.65□□□□□ -0.54
HLA-DQA1-202ENST00000374949 CD300LGQ6UXG3 332 aa11.65□□□□□ -0.54
HLA-DQA1-202ENST00000374949 ALKAL1Q6UXT8 129 aa11.65□□□□□ -0.54
HLA-DQA1-202ENST00000374949 EFCAB13Q8IY85 973 aa11.65□□□□□ -0.54
HLA-DQA1-202ENST00000374949 PPM1KQ8N3J5 372 aa11.65□□□□□ -0.54
HLA-DQA1-202ENST00000374949 ZBTB44Q8NCP5 570 aa11.65□□□□□ -0.54
HLA-DQA1-202ENST00000374949 TAF4BQ92750 862 aa11.65□□□□□ -0.54
HLA-DQA1-202ENST00000374949 CLDN23Q96B33 292 aa11.65□□□□□ -0.54
HLA-DQA1-202ENST00000374949 KIF12Q96FN5 646 aa11.65□□□□□ -0.54
HLA-DQA1-202ENST00000374949 FAM84AQ96KN4 292 aa11.65□□□□□ -0.54
HLA-DQA1-202ENST00000374949 CNTNAP3BQ96NU0 1288 aa11.65□□□□□ -0.54
HLA-DQA1-202ENST00000374949 PPP1R10Q96QC0 940 aaKnown RBP11.65□□□□□ -0.54
HLA-DQA1-202ENST00000374949 PI4K2AQ9BTU6 479 aa11.65□□□□□ -0.54
HLA-DQA1-202ENST00000374949 CNTNAP3Q9BZ76 1288 aa11.65□□□□□ -0.54
HLA-DQA1-202ENST00000374949 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.65□□□□□ -0.54
HLA-DQA1-202ENST00000374949 ZSCAN32Q9NX65 697 aa11.65□□□□□ -0.54
HLA-DQA1-202ENST00000374949 ARHGAP20Q9P2F6 1191 aa11.65□□□□□ -0.54
HLA-DQA1-202ENST00000374949 R3HCC1Q9Y3T6 440 aaKnown RBP11.65□□□□□ -0.54
HLA-DQA1-202ENST00000374949 SSU72P8A0A1W2PR75 194 aa11.64□□□□□ -0.55
HLA-DQA1-202ENST00000374949 F8VZ95 297 aa11.64□□□□□ -0.55
HLA-DQA1-202ENST00000374949 FOXN3O00409 490 aaPredicted RBP11.64□□□□□ -0.55
HLA-DQA1-202ENST00000374949 NRG2O14511 850 aaPredicted RBP11.64□□□□□ -0.55
HLA-DQA1-202ENST00000374949 LILRB5O75023 590 aa11.64□□□□□ -0.55
HLA-DQA1-202ENST00000374949 GFPT2O94808 682 aa11.64□□□□□ -0.55
HLA-DQA1-202ENST00000374949 NFICP08651 508 aa11.64□□□□□ -0.55
HLA-DQA1-202ENST00000374949 KRT83P78385 493 aa11.64□□□□□ -0.55
HLA-DQA1-202ENST00000374949 RBP5P82980 135 aa11.64□□□□□ -0.55
HLA-DQA1-202ENST00000374949 ROR1Q01973 937 aa11.64□□□□□ -0.55
HLA-DQA1-202ENST00000374949 ARID5AQ03989 594 aa11.64□□□□□ -0.55
HLA-DQA1-202ENST00000374949 SOX4Q06945 474 aaPredicted RBP11.64□□□□□ -0.55
HLA-DQA1-202ENST00000374949 MTAPQ13126 283 aa11.64□□□□□ -0.55
HLA-DQA1-202ENST00000374949 MAPK8IP2Q13387 824 aaPredicted RBP11.64□□□□□ -0.55
HLA-DQA1-202ENST00000374949 MTF1Q14872 753 aa11.64□□□□□ -0.55
HLA-DQA1-202ENST00000374949 LPAL2Q16609 132 aa11.64□□□□□ -0.55
HLA-DQA1-202ENST00000374949 XKR4Q5GH76 650 aa11.64□□□□□ -0.55
HLA-DQA1-202ENST00000374949 E4F1Q66K89 784 aaPredicted RBP11.64□□□□□ -0.55
HLA-DQA1-202ENST00000374949 HGSNATQ68CP4 663 aa11.64□□□□□ -0.55
HLA-DQA1-202ENST00000374949 TANGO2Q6ICL3 276 aa11.64□□□□□ -0.55
HLA-DQA1-202ENST00000374949 ZNF852Q6ZMS4 543 aa11.64□□□□□ -0.55
HLA-DQA1-202ENST00000374949 TOGARAM2Q6ZUX3 1019 aa11.64□□□□□ -0.55
HLA-DQA1-202ENST00000374949 ANKS3Q6ZW76 656 aa11.64□□□□□ -0.55
HLA-DQA1-202ENST00000374949 CCAR2Q8N163 923 aaKnown RBP11.64□□□□□ -0.55
HLA-DQA1-202ENST00000374949 BEST2Q8NFU1 509 aa11.64□□□□□ -0.55
HLA-DQA1-202ENST00000374949 NELL1Q92832 810 aa11.64□□□□□ -0.55
HLA-DQA1-202ENST00000374949 JAKMIP2Q96AA8 810 aa11.64□□□□□ -0.55
HLA-DQA1-202ENST00000374949 KREMEN1Q96MU8 473 aa11.64□□□□□ -0.55
HLA-DQA1-202ENST00000374949 DEF6Q9H4E7 631 aa11.64□□□□□ -0.55
HLA-DQA1-202ENST00000374949 PARD6AQ9NPB6 346 aa11.64□□□□□ -0.55
HLA-DQA1-202ENST00000374949 DPP3Q9NY33 737 aa11.64□□□□□ -0.55
HLA-DQA1-202ENST00000374949 CNTN3Q9P232 1028 aa11.64□□□□□ -0.55
HLA-DQA1-202ENST00000374949 CDV3Q9UKY7 258 aaKnown RBP11.64□□□□□ -0.55
HLA-DQA1-202ENST00000374949 USP18Q9UMW8 372 aa11.64□□□□□ -0.55
HLA-DQA1-202ENST00000374949 NDRG2Q9UN36 371 aaKnown RBP11.64□□□□□ -0.55
HLA-DQA1-202ENST00000374949 BACE2Q9Y5Z0 518 aa11.64□□□□□ -0.55
HLA-DQA1-202ENST00000374949 CITO14578 2027 aa11.64□□□□□ -0.55
HLA-DQA1-202ENST00000374949 PDCD11Q14690 1871 aaKnown RBP11.63□□□□□ -0.55
HLA-DQA1-202ENST00000374949 WDR27A2RRH5 827 aa11.63□□□□□ -0.55
HLA-DQA1-202ENST00000374949 EIF3CLB5ME19 914 aaKnown RBP11.63□□□□□ -0.55
HLA-DQA1-202ENST00000374949 PRRG1O14668 218 aa11.63□□□□□ -0.55
HLA-DQA1-202ENST00000374949 XPOTO43592 962 aaKnown RBP11.63□□□□□ -0.55
HLA-DQA1-202ENST00000374949 AKR1B10O60218 316 aa11.63□□□□□ -0.55
HLA-DQA1-202ENST00000374949 KRT37O76014 449 aa11.63□□□□□ -0.55
HLA-DQA1-202ENST00000374949 NDUFA10O95299 355 aa11.63□□□□□ -0.55
HLA-DQA1-202ENST00000374949 ASS1P00966 412 aaKnown RBP11.63□□□□□ -0.55
HLA-DQA1-202ENST00000374949 LRG1P02750 347 aa11.63□□□□□ -0.55
HLA-DQA1-202ENST00000374949 KRT19P08727 400 aa11.63□□□□□ -0.55
HLA-DQA1-202ENST00000374949 CCDC175P0C221 793 aa11.63□□□□□ -0.55
HLA-DQA1-202ENST00000374949 KCNE1P15382 129 aa11.63□□□□□ -0.55
HLA-DQA1-202ENST00000374949 TBXAS1P24557 533 aaPredicted RBP11.63□□□□□ -0.55
HLA-DQA1-202ENST00000374949 ATICP31939 592 aa11.63□□□□□ -0.55
HLA-DQA1-202ENST00000374949 USP8P40818 1118 aa11.63□□□□□ -0.55
HLA-DQA1-202ENST00000374949 PRKCIP41743 596 aa11.63□□□□□ -0.55
HLA-DQA1-202ENST00000374949 RPS9P46781 194 aaKnown RBP11.63□□□□□ -0.55
HLA-DQA1-202ENST00000374949 ATXN1P54253 815 aaKnown RBP11.63□□□□□ -0.55
HLA-DQA1-202ENST00000374949 ARPP19P56211 112 aa11.63□□□□□ -0.55
HLA-DQA1-202ENST00000374949 MYL6P60660 151 aa11.63□□□□□ -0.55
HLA-DQA1-202ENST00000374949 LMNB2Q03252 620 aa11.63□□□□□ -0.55
HLA-DQA1-202ENST00000374949 FZD5Q13467 585 aa11.63□□□□□ -0.55
HLA-DQA1-202ENST00000374949 ZBTB6Q15916 424 aa11.63□□□□□ -0.55
HLA-DQA1-202ENST00000374949 UPP1Q16831 310 aa11.63□□□□□ -0.55
HLA-DQA1-202ENST00000374949 FAM78AQ5JUQ0 283 aa11.63□□□□□ -0.55
HLA-DQA1-202ENST00000374949 PRSS36Q5K4E3 855 aa11.63□□□□□ -0.55
HLA-DQA1-202ENST00000374949 SMYD5Q6GMV2 418 aa11.63□□□□□ -0.55
HLA-DQA1-202ENST00000374949 C17orf53Q8N3J3 647 aaPredicted RBP11.63□□□□□ -0.55
HLA-DQA1-202ENST00000374949 C1orf127Q8N9H9 656 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms