RNA–Protein interactions for RNA: ENST00000374943.8

HLA-DQB1-201, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,656 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-201ENST00000374943 TNIP3Q96KP6 325 aa18.92■□□□□ 0.62
HLA-DQB1-201ENST00000374943 ZFP42Q96MM3 310 aa18.92■□□□□ 0.62
HLA-DQB1-201ENST00000374943 DDX20Q9UHI6 824 aaKnown RBP18.92■□□□□ 0.62
HLA-DQB1-201ENST00000374943 LIASO43766 372 aa18.91■□□□□ 0.62
HLA-DQB1-201ENST00000374943 ZNF623O75123 536 aa18.91■□□□□ 0.62
HLA-DQB1-201ENST00000374943 KRT10P13645 584 aa18.91■□□□□ 0.62
HLA-DQB1-201ENST00000374943 THPOP40225 353 aa18.91■□□□□ 0.62
HLA-DQB1-201ENST00000374943 LBX1P52954 281 aa18.91■□□□□ 0.62
HLA-DQB1-201ENST00000374943 GYS2P54840 703 aa18.91■□□□□ 0.62
HLA-DQB1-201ENST00000374943 SLC6A3Q01959 620 aa18.91■□□□□ 0.62
HLA-DQB1-201ENST00000374943 PDE4CQ08493 712 aa18.91■□□□□ 0.62
HLA-DQB1-201ENST00000374943 TRNP1Q6NT89 227 aa18.91■□□□□ 0.62
HLA-DQB1-201ENST00000374943 CMASQ8NFW8 434 aaPredicted RBP18.91■□□□□ 0.62
HLA-DQB1-201ENST00000374943 SNF8Q96H20 258 aa18.91■□□□□ 0.62
HLA-DQB1-201ENST00000374943 FRMD8P1Q9BZ68 369 aaPredicted RBP18.91■□□□□ 0.62
HLA-DQB1-201ENST00000374943 AGO3Q9H9G7 860 aaKnown RBP18.91■□□□□ 0.62
HLA-DQB1-201ENST00000374943 GOLGA6CA6NDK9 693 aa18.9■□□□□ 0.62
HLA-DQB1-201ENST00000374943 TULP2O00295 520 aa18.9■□□□□ 0.62
HLA-DQB1-201ENST00000374943 TRUB2O95900 331 aaKnown RBP18.9■□□□□ 0.62
HLA-DQB1-201ENST00000374943 GOLGA6DP0CG33 693 aa18.9■□□□□ 0.62
HLA-DQB1-201ENST00000374943 ITIH2P19823 946 aa18.9■□□□□ 0.62
HLA-DQB1-201ENST00000374943 KDELR1P24390 212 aa18.9■□□□□ 0.62
HLA-DQB1-201ENST00000374943 LMO2P25791 158 aa18.9■□□□□ 0.62
HLA-DQB1-201ENST00000374943 IVDP26440 423 aa18.9■□□□□ 0.62
HLA-DQB1-201ENST00000374943 MIPP30301 263 aa18.9■□□□□ 0.62
HLA-DQB1-201ENST00000374943 MLH1P40692 756 aa18.9■□□□□ 0.62
HLA-DQB1-201ENST00000374943 RGS7P49802 495 aa18.9■□□□□ 0.62
HLA-DQB1-201ENST00000374943 ADCY2Q08462 1091 aa18.9■□□□□ 0.62
HLA-DQB1-201ENST00000374943 CALCOCO2Q13137 446 aa18.9■□□□□ 0.62
HLA-DQB1-201ENST00000374943 DSC3Q14574 896 aa18.9■□□□□ 0.62
HLA-DQB1-201ENST00000374943 TRIM71Q2Q1W2 868 aaKnown RBP18.9■□□□□ 0.62
HLA-DQB1-201ENST00000374943 TTMPQ5BVD1 217 aa18.9■□□□□ 0.62
HLA-DQB1-201ENST00000374943 ZNF618Q5T7W0 954 aa18.9■□□□□ 0.62
HLA-DQB1-201ENST00000374943 ARCQ7LC44 396 aa18.9■□□□□ 0.62
HLA-DQB1-201ENST00000374943 RNF180Q86T96 592 aa18.9■□□□□ 0.62
HLA-DQB1-201ENST00000374943 RXFP2Q8WXD0 754 aa18.9■□□□□ 0.62
HLA-DQB1-201ENST00000374943 PIWIL1Q96J94 861 aaKnown RBP18.9■□□□□ 0.62
HLA-DQB1-201ENST00000374943 CCDC114Q96M63 670 aa18.9■□□□□ 0.62
HLA-DQB1-201ENST00000374943 TSPYL2Q9H2G4 693 aaPredicted RBP18.9■□□□□ 0.62
HLA-DQB1-201ENST00000374943 ZWILCHQ9H900 591 aa18.9■□□□□ 0.62
HLA-DQB1-201ENST00000374943 GOLGA6AQ9NYA3 693 aa18.9■□□□□ 0.62
HLA-DQB1-201ENST00000374943 MEIS3P2A8K0S8 358 aa18.89■□□□□ 0.61
HLA-DQB1-201ENST00000374943 HCRTO43612 131 aa18.89■□□□□ 0.61
HLA-DQB1-201ENST00000374943 CAND2O75155 1236 aa18.89■□□□□ 0.61
HLA-DQB1-201ENST00000374943 THP07101 528 aa18.89■□□□□ 0.61
HLA-DQB1-201ENST00000374943 PDGFRBP09619 1106 aa18.89■□□□□ 0.61
HLA-DQB1-201ENST00000374943 PDGFRAP16234 1089 aa18.89■□□□□ 0.61
HLA-DQB1-201ENST00000374943 CAV1Q03135 178 aa18.89■□□□□ 0.61
HLA-DQB1-201ENST00000374943 ITGA7Q13683 1181 aa18.89■□□□□ 0.61
HLA-DQB1-201ENST00000374943 KAZNQ674X7 775 aa18.89■□□□□ 0.61
HLA-DQB1-201ENST00000374943 RHBDF2Q6PJF5 856 aa18.89■□□□□ 0.61
HLA-DQB1-201ENST00000374943 OSTM1Q86WC4 334 aa18.89■□□□□ 0.61
HLA-DQB1-201ENST00000374943 CCDC89Q8N998 374 aa18.89■□□□□ 0.61
HLA-DQB1-201ENST00000374943 CCHCR1Q8TD31 782 aa18.89■□□□□ 0.61
HLA-DQB1-201ENST00000374943 PXYLP1Q8TE99 480 aa18.89■□□□□ 0.61
HLA-DQB1-201ENST00000374943 UBLCP1Q8WVY7 318 aaPredicted RBP18.89■□□□□ 0.61
HLA-DQB1-201ENST00000374943 NKD2Q969F2 451 aaPredicted RBP18.89■□□□□ 0.61
HLA-DQB1-201ENST00000374943 ARL8AQ96BM9 186 aa18.89■□□□□ 0.61
HLA-DQB1-201ENST00000374943 GAD1Q99259 594 aa18.89■□□□□ 0.61
HLA-DQB1-201ENST00000374943 NCAPGQ9BPX3 1015 aa18.89■□□□□ 0.61
HLA-DQB1-201ENST00000374943 ASIC3Q9UHC3 531 aa18.89■□□□□ 0.61
HLA-DQB1-201ENST00000374943 PADI3Q9ULW8 664 aa18.89■□□□□ 0.61
HLA-DQB1-201ENST00000374943 USP18Q9UMW8 372 aa18.89■□□□□ 0.61
HLA-DQB1-201ENST00000374943 DRG1Q9Y295 367 aaKnown RBP18.89■□□□□ 0.61
HLA-DQB1-201ENST00000374943 SQORQ9Y6N5 450 aa18.89■□□□□ 0.61
HLA-DQB1-201ENST00000374943 CYB561D2O14569 222 aa18.89■□□□□ 0.61
HLA-DQB1-201ENST00000374943 GABRDO14764 452 aa18.89■□□□□ 0.61
HLA-DQB1-201ENST00000374943 TP73O15350 636 aa18.89■□□□□ 0.61
HLA-DQB1-201ENST00000374943 PAPSS1O43252 624 aaPredicted RBP18.89■□□□□ 0.61
HLA-DQB1-201ENST00000374943 GABBR2O75899 941 aa18.89■□□□□ 0.61
HLA-DQB1-201ENST00000374943 GNRH1P01148 92 aa18.89■□□□□ 0.61
HLA-DQB1-201ENST00000374943 KRT14P02533 472 aa18.89■□□□□ 0.61
HLA-DQB1-201ENST00000374943 HSPA8P11142 646 aaKnown RBP18.89■□□□□ 0.61
HLA-DQB1-201ENST00000374943 CCDC130P13994 396 aa18.89■□□□□ 0.61
HLA-DQB1-201ENST00000374943 ACADSBP45954 432 aa18.89■□□□□ 0.61
HLA-DQB1-201ENST00000374943 BYSLQ13895 437 aaKnown RBP18.89■□□□□ 0.61
HLA-DQB1-201ENST00000374943 SLMAPQ14BN4 828 aa18.89■□□□□ 0.61
HLA-DQB1-201ENST00000374943 AGMOQ6ZNB7 445 aa18.89■□□□□ 0.61
HLA-DQB1-201ENST00000374943 BBS12Q6ZW61 710 aa18.89■□□□□ 0.61
HLA-DQB1-201ENST00000374943 B3GALNT2Q8NCR0 500 aa18.89■□□□□ 0.61
HLA-DQB1-201ENST00000374943 BBOF1Q8ND07 529 aa18.89■□□□□ 0.61
HLA-DQB1-201ENST00000374943 FAM76AQ8TAV0 307 aa18.89■□□□□ 0.61
HLA-DQB1-201ENST00000374943 CD99L2Q8TCZ2 262 aa18.89■□□□□ 0.61
HLA-DQB1-201ENST00000374943 KHSRPQ92945 711 aaKnown RBP eCLIP18.89■□□□□ 0.61
HLA-DQB1-201ENST00000374943 ACSF2Q96CM8 615 aaPredicted RBP18.89■□□□□ 0.61
HLA-DQB1-201ENST00000374943 HSFY1Q96LI6 401 aa18.89■□□□□ 0.61
HLA-DQB1-201ENST00000374943 HNRNPABQ99729 332 aaKnown RBP18.89■□□□□ 0.61
HLA-DQB1-201ENST00000374943 PABPC3Q9H361 631 aaKnown RBP18.89■□□□□ 0.61
HLA-DQB1-201ENST00000374943 ZKSCAN7Q9P0L1 754 aaPredicted RBP18.89■□□□□ 0.61
HLA-DQB1-201ENST00000374943 ATP8A1Q9Y2Q0 1164 aa18.89■□□□□ 0.61
HLA-DQB1-201ENST00000374943 ARL5CA6NH57 179 aa18.88■□□□□ 0.61
HLA-DQB1-201ENST00000374943 ENDOD1O94919 500 aa18.88■□□□□ 0.61
HLA-DQB1-201ENST00000374943 NUDT17P0C025 328 aa18.88■□□□□ 0.61
HLA-DQB1-201ENST00000374943 ATF2P15336 505 aa18.88■□□□□ 0.61
HLA-DQB1-201ENST00000374943 KLRC2P26717 231 aa18.88■□□□□ 0.61
HLA-DQB1-201ENST00000374943 CD52P31358 61 aa18.88■□□□□ 0.61
HLA-DQB1-201ENST00000374943 RPL9P32969 192 aaKnown RBP18.88■□□□□ 0.61
HLA-DQB1-201ENST00000374943 ACLYP53396 1101 aa18.88■□□□□ 0.61
HLA-DQB1-201ENST00000374943 PMS2P54278 862 aa18.88■□□□□ 0.61
HLA-DQB1-201ENST00000374943 EIF3BP55884 814 aaKnown RBP18.88■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms