RNA–Protein interactions for RNA: ENST00000374879.4

TMEFF1-201, Transcript of transmembrane protein with EGF like and two follistatin like domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEFF1, Length 2,611 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1-201ENST00000374879 CASQ2O14958 399 aaPredicted RBP21.47■■□□□ 1.03
TMEFF1-201ENST00000374879 ATP2A1O14983 1001 aa21.47■■□□□ 1.03
TMEFF1-201ENST00000374879 IL1BP01584 269 aa21.47■■□□□ 1.03
TMEFF1-201ENST00000374879 CYP11B1P15538 503 aa21.47■■□□□ 1.03
TMEFF1-201ENST00000374879 GAP43P17677 238 aa21.47■■□□□ 1.03
TMEFF1-201ENST00000374879 CD58P19256 250 aa21.47■■□□□ 1.03
TMEFF1-201ENST00000374879 STT3AP46977 705 aa21.47■■□□□ 1.03
TMEFF1-201ENST00000374879 AQP5P55064 265 aa21.47■■□□□ 1.03
TMEFF1-201ENST00000374879 NAA20P61599 178 aa21.47■■□□□ 1.03
TMEFF1-201ENST00000374879 GPATCH4Q5T3I0 446 aaKnown RBP21.47■■□□□ 1.03
TMEFF1-201ENST00000374879 RNASEH2BQ5TBB1 312 aaKnown RBP21.47■■□□□ 1.03
TMEFF1-201ENST00000374879 ACAD10Q6JQN1 1059 aa21.47■■□□□ 1.03
TMEFF1-201ENST00000374879 CERS5Q8N5B7 392 aa21.47■■□□□ 1.03
TMEFF1-201ENST00000374879 CNBD2Q96M20 576 aa21.47■■□□□ 1.03
TMEFF1-201ENST00000374879 ACAP3Q96P50 834 aa21.47■■□□□ 1.03
TMEFF1-201ENST00000374879 MECRQ9BV79 373 aa21.47■■□□□ 1.03
TMEFF1-201ENST00000374879 EP400Q96L91 3159 aa21.47■■□□□ 1.03
TMEFF1-201ENST00000374879 HTR3EA5X5Y0 456 aa21.47■■□□□ 1.03
TMEFF1-201ENST00000374879 PEX1O43933 1283 aa21.47■■□□□ 1.03
TMEFF1-201ENST00000374879 CCNT2O60583 730 aaKnown RBP21.47■■□□□ 1.03
TMEFF1-201ENST00000374879 SERPINB7O75635 380 aa21.47■■□□□ 1.03
TMEFF1-201ENST00000374879 SLITRK3O94933 977 aa21.47■■□□□ 1.03
TMEFF1-201ENST00000374879 CALCAP01258 141 aa21.47■■□□□ 1.03
TMEFF1-201ENST00000374879 MORF4L2Q15014 288 aa21.47■■□□□ 1.03
TMEFF1-201ENST00000374879 EPC2Q52LR7 807 aa21.47■■□□□ 1.03
TMEFF1-201ENST00000374879 C2CD6Q53TS8 623 aa21.47■■□□□ 1.03
TMEFF1-201ENST00000374879 TMEM53Q6P2H8 277 aa21.47■■□□□ 1.03
TMEFF1-201ENST00000374879 C17orf50Q8WW18 174 aa21.47■■□□□ 1.03
TMEFF1-201ENST00000374879 DCUN1D1Q96GG9 259 aa21.47■■□□□ 1.03
TMEFF1-201ENST00000374879 RILPQ96NA2 401 aa21.47■■□□□ 1.03
TMEFF1-201ENST00000374879 WWP1Q9H0M0 922 aa21.47■■□□□ 1.03
TMEFF1-201ENST00000374879 PLK2Q9NYY3 685 aa21.47■■□□□ 1.03
TMEFF1-201ENST00000374879 HEY1Q9Y5J3 304 aa21.47■■□□□ 1.03
TMEFF1-201ENST00000374879 MAD1L1Q9Y6D9 718 aa21.47■■□□□ 1.03
TMEFF1-201ENST00000374879 BIRC5O15392 142 aa21.46■■□□□ 1.03
TMEFF1-201ENST00000374879 SLURP2P0DP57 97 aa21.46■■□□□ 1.03
TMEFF1-201ENST00000374879 HOXA10P31260 410 aaPredicted RBP21.46■■□□□ 1.03
TMEFF1-201ENST00000374879 ALDH1A3P47895 512 aa21.46■■□□□ 1.03
TMEFF1-201ENST00000374879 SCNN1DP51172 638 aa21.46■■□□□ 1.03
TMEFF1-201ENST00000374879 ADRM1Q16186 407 aa21.46■■□□□ 1.03
TMEFF1-201ENST00000374879 CES4AQ5XG92 561 aa21.46■■□□□ 1.03
TMEFF1-201ENST00000374879 ANO5Q75V66 913 aa21.46■■□□□ 1.03
TMEFF1-201ENST00000374879 EFCAB3Q8N7B9 438 aa21.46■■□□□ 1.03
TMEFF1-201ENST00000374879 DQX1Q8TE96 717 aaKnown RBP21.46■■□□□ 1.03
TMEFF1-201ENST00000374879 PYROXD1Q8WU10 500 aa21.46■■□□□ 1.03
TMEFF1-201ENST00000374879 TMOD2Q9NZR1 351 aa21.46■■□□□ 1.03
TMEFF1-201ENST00000374879 H3BNX3 289 aa21.46■■□□□ 1.03
TMEFF1-201ENST00000374879 LIASO43766 372 aa21.46■■□□□ 1.03
TMEFF1-201ENST00000374879 PDGFRBP09619 1106 aa21.46■■□□□ 1.03
TMEFF1-201ENST00000374879 HALP42357 657 aa21.46■■□□□ 1.03
TMEFF1-201ENST00000374879 TAS2R40P59535 323 aa21.46■■□□□ 1.03
TMEFF1-201ENST00000374879 MSS51Q4VC12 460 aa21.46■■□□□ 1.03
TMEFF1-201ENST00000374879 OGFRL1Q5TC84 451 aaPredicted RBP21.46■■□□□ 1.03
TMEFF1-201ENST00000374879 KAZNQ674X7 775 aa21.46■■□□□ 1.03
TMEFF1-201ENST00000374879 ZNF720Q7Z2F6 126 aa21.46■■□□□ 1.03
TMEFF1-201ENST00000374879 PASD1Q8IV76 773 aa21.46■■□□□ 1.03
TMEFF1-201ENST00000374879 GIPC3Q8TF64 312 aa21.46■■□□□ 1.03
TMEFF1-201ENST00000374879 VTI1AQ96AJ9 217 aa21.46■■□□□ 1.03
TMEFF1-201ENST00000374879 PCIF1Q9H4Z3 704 aa21.46■■□□□ 1.03
TMEFF1-201ENST00000374879 TNFAIP8O95379 198 aa21.45■■□□□ 1.02
TMEFF1-201ENST00000374879 ALDH2P05091 517 aa21.45■■□□□ 1.02
TMEFF1-201ENST00000374879 KRT10P13645 584 aa21.45■■□□□ 1.02
TMEFF1-201ENST00000374879 CETN1Q12798 172 aa21.45■■□□□ 1.02
TMEFF1-201ENST00000374879 BORAQ6PGQ7 559 aa21.45■■□□□ 1.02
TMEFF1-201ENST00000374879 APOPT1Q96IL0 206 aa21.45■■□□□ 1.02
TMEFF1-201ENST00000374879 FIZ1Q96SL8 496 aa21.45■■□□□ 1.02
TMEFF1-201ENST00000374879 ACSS3Q9H6R3 686 aa21.45■■□□□ 1.02
TMEFF1-201ENST00000374879 ZNF696Q9H7X3 374 aa21.45■■□□□ 1.02
TMEFF1-201ENST00000374879 TPD52L2O43399 206 aaKnown RBP21.45■■□□□ 1.02
TMEFF1-201ENST00000374879 CRTAMO95727 393 aa21.45■■□□□ 1.02
TMEFF1-201ENST00000374879 PHBP35232 272 aa21.45■■□□□ 1.02
TMEFF1-201ENST00000374879 RELAQ04206 551 aa21.45■■□□□ 1.02
TMEFF1-201ENST00000374879 BST1Q10588 318 aa21.45■■□□□ 1.02
TMEFF1-201ENST00000374879 EBF4Q9BQW3 602 aa21.45■■□□□ 1.02
TMEFF1-201ENST00000374879 KLHL11Q9NVR0 708 aa21.45■■□□□ 1.02
TMEFF1-201ENST00000374879 FETUBQ9UGM5 382 aa21.45■■□□□ 1.02
TMEFF1-201ENST00000374879 STK24Q9Y6E0 443 aa21.45■■□□□ 1.02
TMEFF1-201ENST00000374879 ZNFX1Q9P2E3 1918 aaKnown RBP21.45■■□□□ 1.02
TMEFF1-201ENST00000374879 ZBTB39O15060 712 aa21.44■■□□□ 1.02
TMEFF1-201ENST00000374879 GRIN3BO60391 1043 aa21.44■■□□□ 1.02
TMEFF1-201ENST00000374879 SRGAP2CP0DJJ0 459 aa21.44■■□□□ 1.02
TMEFF1-201ENST00000374879 SRGAP2BP0DMP2 458 aa21.44■■□□□ 1.02
TMEFF1-201ENST00000374879 APOFQ13790 326 aa21.44■■□□□ 1.02
TMEFF1-201ENST00000374879 HIF1AQ16665 826 aa21.44■■□□□ 1.02
TMEFF1-201ENST00000374879 FNBP1LQ5T0N5 605 aa21.44■■□□□ 1.02
TMEFF1-201ENST00000374879 CCDC80Q76M96 950 aa21.44■■□□□ 1.02
TMEFF1-201ENST00000374879 CROCCP3Q8IVE0 287 aa21.44■■□□□ 1.02
TMEFF1-201ENST00000374879 SEPT12Q8IYM1 358 aa21.44■■□□□ 1.02
TMEFF1-201ENST00000374879 AHI1Q8N157 1196 aa21.44■■□□□ 1.02
TMEFF1-201ENST00000374879 MKL1Q969V6 931 aa21.44■■□□□ 1.02
TMEFF1-201ENST00000374879 COA1Q9GZY4 146 aa21.44■■□□□ 1.02
TMEFF1-201ENST00000374879 I3L4J1 428 aa21.44■■□□□ 1.02
TMEFF1-201ENST00000374879 KLF11O14901 512 aa21.44■■□□□ 1.02
TMEFF1-201ENST00000374879 CPA3P15088 417 aa21.44■■□□□ 1.02
TMEFF1-201ENST00000374879 ENTPD1P49961 510 aa21.44■■□□□ 1.02
TMEFF1-201ENST00000374879 PSMD7P51665 324 aa21.44■■□□□ 1.02
TMEFF1-201ENST00000374879 TCHHL1Q5QJ38 904 aaPredicted RBP21.44■■□□□ 1.02
TMEFF1-201ENST00000374879 PACS1Q6VY07 963 aa21.44■■□□□ 1.02
TMEFF1-201ENST00000374879 ERI1Q8IV48 349 aaKnown RBP21.44■■□□□ 1.02
TMEFF1-201ENST00000374879 ALLCQ8N6M5 410 aa21.44■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms