RNA–Protein interactions for RNA: ENST00000374253.9

CNKSR1-202, Transcript of connector enhancer of kinase suppressor of Ras 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CNKSR1, Length 2,538 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1-202ENST00000374253 LRRC34Q8IZ02 419 aa16.77■□□□□ 0.28
CNKSR1-202ENST00000374253 GDAP1Q8TB36 358 aa16.77■□□□□ 0.28
CNKSR1-202ENST00000374253 CHMP6Q96FZ7 201 aa16.77■□□□□ 0.28
CNKSR1-202ENST00000374253 SEC16BQ96JE7 1060 aa16.77■□□□□ 0.28
CNKSR1-202ENST00000374253 RNF39Q9H2S5 420 aa16.77■□□□□ 0.28
CNKSR1-202ENST00000374253 ZSWIM8A7E2V4 1837 aa16.77■□□□□ 0.27
CNKSR1-202ENST00000374253 POC1B-GALNT4F8VUJ3 575 aa16.76■□□□□ 0.27
CNKSR1-202ENST00000374253 GPR32O75388 356 aa16.76■□□□□ 0.27
CNKSR1-202ENST00000374253 KIAA0754O94854 1291 aa16.76■□□□□ 0.27
CNKSR1-202ENST00000374253 TRUB2O95900 331 aaKnown RBP16.76■□□□□ 0.27
CNKSR1-202ENST00000374253 HMGCRP04035 888 aa16.76■□□□□ 0.27
CNKSR1-202ENST00000374253 VIMP08670 466 aaKnown RBP16.76■□□□□ 0.27
CNKSR1-202ENST00000374253 YARSP54577 528 aaKnown RBP16.76■□□□□ 0.27
CNKSR1-202ENST00000374253 CDH6P55285 790 aa16.76■□□□□ 0.27
CNKSR1-202ENST00000374253 MPP2Q14168 576 aa16.76■□□□□ 0.27
CNKSR1-202ENST00000374253 TMED2Q15363 201 aa16.76■□□□□ 0.27
CNKSR1-202ENST00000374253 SPRED3Q2MJR0 410 aa16.76■□□□□ 0.27
CNKSR1-202ENST00000374253 ZNF618Q5T7W0 954 aa16.76■□□□□ 0.27
CNKSR1-202ENST00000374253 OLFML2BQ68BL8 750 aa16.76■□□□□ 0.27
CNKSR1-202ENST00000374253 POLNQ7Z5Q5 900 aa16.76■□□□□ 0.27
CNKSR1-202ENST00000374253 ZNF467Q7Z7K2 595 aaPredicted RBP16.76■□□□□ 0.27
CNKSR1-202ENST00000374253 OTUD6BQ8N6M0 293 aa16.76■□□□□ 0.27
CNKSR1-202ENST00000374253 FAM71DQ8N9W8 422 aa16.76■□□□□ 0.27
CNKSR1-202ENST00000374253 OR6B3Q8NGW1 331 aa16.76■□□□□ 0.27
CNKSR1-202ENST00000374253 SLC35B2Q8TB61 432 aa16.76■□□□□ 0.27
CNKSR1-202ENST00000374253 KAT2BQ92831 832 aa16.76■□□□□ 0.27
CNKSR1-202ENST00000374253 PARK7Q99497 189 aaKnown RBP16.76■□□□□ 0.27
CNKSR1-202ENST00000374253 ROPN1BQ9BZX4 212 aaPredicted RBP16.76■□□□□ 0.27
CNKSR1-202ENST00000374253 VRTNQ9H8Y1 702 aa16.76■□□□□ 0.27
CNKSR1-202ENST00000374253 ROPN1Q9HAT0 212 aaPredicted RBP16.76■□□□□ 0.27
CNKSR1-202ENST00000374253 NGRNQ9NPE2 291 aaKnown RBP16.76■□□□□ 0.27
CNKSR1-202ENST00000374253 NAALADL1Q9UQQ1 740 aa16.76■□□□□ 0.27
CNKSR1-202ENST00000374253 TCRBV7S3A2A0A539 114 aa16.76■□□□□ 0.27
CNKSR1-202ENST00000374253 RECQL4O94761 1208 aa16.76■□□□□ 0.27
CNKSR1-202ENST00000374253 INCA1Q0VD86 236 aa16.76■□□□□ 0.27
CNKSR1-202ENST00000374253 CCDC142Q17RM4 750 aa16.76■□□□□ 0.27
CNKSR1-202ENST00000374253 VSTM1Q6UX27 236 aa16.76■□□□□ 0.27
CNKSR1-202ENST00000374253 BBOF1Q8ND07 529 aa16.76■□□□□ 0.27
CNKSR1-202ENST00000374253 CLEC4CQ8WTT0 213 aa16.76■□□□□ 0.27
CNKSR1-202ENST00000374253 DYDC1Q8WWB3 177 aa16.76■□□□□ 0.27
CNKSR1-202ENST00000374253 SERPINB12Q96P63 405 aa16.76■□□□□ 0.27
CNKSR1-202ENST00000374253 GCOM2Q9BZD3 368 aaPredicted RBP16.76■□□□□ 0.27
CNKSR1-202ENST00000374253 VPS37BQ9H9H4 285 aa16.76■□□□□ 0.27
CNKSR1-202ENST00000374253 WDR35Q9P2L0 1181 aa16.76■□□□□ 0.27
CNKSR1-202ENST00000374253 PIN4Q9Y237 131 aaKnown RBP16.76■□□□□ 0.27
CNKSR1-202ENST00000374253 TREHO43280 583 aa16.75■□□□□ 0.27
CNKSR1-202ENST00000374253 TFE3P19532 575 aaPredicted RBP16.75■□□□□ 0.27
CNKSR1-202ENST00000374253 CTCFP49711 727 aaPredicted RBP16.75■□□□□ 0.27
CNKSR1-202ENST00000374253 PDIA2Q13087 525 aaKnown RBP16.75■□□□□ 0.27
CNKSR1-202ENST00000374253 RNASEH2BQ5TBB1 312 aaKnown RBP16.75■□□□□ 0.27
CNKSR1-202ENST00000374253 SLC27A1Q6PCB7 646 aa16.75■□□□□ 0.27
CNKSR1-202ENST00000374253 TAOK1Q7L7X3 1001 aa16.75■□□□□ 0.27
CNKSR1-202ENST00000374253 CCDC33Q8N5R6 958 aa16.75■□□□□ 0.27
CNKSR1-202ENST00000374253 NKD2Q969F2 451 aaPredicted RBP16.75■□□□□ 0.27
CNKSR1-202ENST00000374253 ZNF317Q96PQ6 595 aaPredicted RBP16.75■□□□□ 0.27
CNKSR1-202ENST00000374253 MAGEB5Q9BZ81 275 aa16.75■□□□□ 0.27
CNKSR1-202ENST00000374253 ITGAVP06756 1048 aa16.75■□□□□ 0.27
CNKSR1-202ENST00000374253 GPD1P21695 349 aa16.75■□□□□ 0.27
CNKSR1-202ENST00000374253 ADORA2BP29275 332 aa16.75■□□□□ 0.27
CNKSR1-202ENST00000374253 MAGEA9P43362 315 aa16.75■□□□□ 0.27
CNKSR1-202ENST00000374253 GABRB2P47870 512 aa16.75■□□□□ 0.27
CNKSR1-202ENST00000374253 FAM110CQ1W6H9 321 aa16.75■□□□□ 0.27
CNKSR1-202ENST00000374253 ZC3H12AQ5D1E8 599 aaKnown RBP16.75■□□□□ 0.27
CNKSR1-202ENST00000374253 DRICH1Q6PGQ1 229 aaPredicted RBP16.75■□□□□ 0.27
CNKSR1-202ENST00000374253 C1orf228Q6PIY5 440 aa16.75■□□□□ 0.27
CNKSR1-202ENST00000374253 LCLAT1Q6UWP7 414 aa16.75■□□□□ 0.27
CNKSR1-202ENST00000374253 ZNF410Q86VK4 478 aa16.75■□□□□ 0.27
CNKSR1-202ENST00000374253 FNIP1Q8TF40 1166 aa16.75■□□□□ 0.27
CNKSR1-202ENST00000374253 RSAD2Q8WXG1 361 aa16.75■□□□□ 0.27
CNKSR1-202ENST00000374253 CABS1Q96KC9 395 aa16.75■□□□□ 0.27
CNKSR1-202ENST00000374253 TSPYL1Q9H0U9 437 aa16.75■□□□□ 0.27
CNKSR1-202ENST00000374253 STMN4Q9H169 189 aaPredicted RBP16.75■□□□□ 0.27
CNKSR1-202ENST00000374253 DRG1Q9Y295 367 aaKnown RBP16.75■□□□□ 0.27
CNKSR1-202ENST00000374253 EXOC1LA0A1B0GW35 172 aa16.74■□□□□ 0.27
CNKSR1-202ENST00000374253 C2CD4BA6NLJ0 364 aa16.74■□□□□ 0.27
CNKSR1-202ENST00000374253 CCDC130P13994 396 aa16.74■□□□□ 0.27
CNKSR1-202ENST00000374253 BRAFP15056 766 aa16.74■□□□□ 0.27
CNKSR1-202ENST00000374253 CYP2B6P20813 491 aa16.74■□□□□ 0.27
CNKSR1-202ENST00000374253 ZNF143P52747 638 aaPredicted RBP16.74■□□□□ 0.27
CNKSR1-202ENST00000374253 ATXN1P54253 815 aaKnown RBP16.74■□□□□ 0.27
CNKSR1-202ENST00000374253 EIF3EP60228 445 aaKnown RBP16.74■□□□□ 0.27
CNKSR1-202ENST00000374253 MSS51Q4VC12 460 aa16.74■□□□□ 0.27
CNKSR1-202ENST00000374253 IQSEC1Q6DN90 963 aa16.74■□□□□ 0.27
CNKSR1-202ENST00000374253 BBS12Q6ZW61 710 aa16.74■□□□□ 0.27
CNKSR1-202ENST00000374253 TADA2BQ86TJ2 420 aa16.74■□□□□ 0.27
CNKSR1-202ENST00000374253 TLK2Q86UE8 772 aa16.74■□□□□ 0.27
CNKSR1-202ENST00000374253 SPATA18Q8TC71 538 aa16.74■□□□□ 0.27
CNKSR1-202ENST00000374253 SNX27Q96L92 541 aa16.74■□□□□ 0.27
CNKSR1-202ENST00000374253 KIF9Q9HAQ2 790 aa16.74■□□□□ 0.27
CNKSR1-202ENST00000374253 CACNG4Q9UBN1 327 aa16.74■□□□□ 0.27
CNKSR1-202ENST00000374253 GABBR2O75899 941 aa16.74■□□□□ 0.27
CNKSR1-202ENST00000374253 MYL3P08590 195 aa16.74■□□□□ 0.27
CNKSR1-202ENST00000374253 LMO2P25791 158 aa16.74■□□□□ 0.27
CNKSR1-202ENST00000374253 PTPN7P35236 360 aa16.74■□□□□ 0.27
CNKSR1-202ENST00000374253 RPL22P35268 128 aaKnown RBP16.74■□□□□ 0.27
CNKSR1-202ENST00000374253 HTTP42858 3142 aa16.74■□□□□ 0.27
CNKSR1-202ENST00000374253 GKAP1Q5VSY0 366 aaPredicted RBP16.74■□□□□ 0.27
CNKSR1-202ENST00000374253 CYP4V2Q6ZWL3 525 aaPredicted RBP16.74■□□□□ 0.27
CNKSR1-202ENST00000374253 PRCCQ92733 491 aaPredicted RBP16.74■□□□□ 0.27
CNKSR1-202ENST00000374253 PCDH9Q9HC56 1237 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms