RNA–Protein interactions for RNA: ENST00000372755.7

VCL-202, Transcript of vinculin, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VCL, Length 6,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-202ENST00000372755 PDP2Q9P2J9 529 aa11.95□□□□□ -0.5
VCL-202ENST00000372755 NFKBIL1Q9UBC1 381 aaPredicted RBP11.95□□□□□ -0.5
VCL-202ENST00000372755 KIAA1257Q9ULG3 409 aa11.95□□□□□ -0.5
VCL-202ENST00000372755 TNS3Q68CZ2 1445 aa11.95□□□□□ -0.5
VCL-202ENST00000372755 FAM205CA6NFA0 338 aa11.95□□□□□ -0.5
VCL-202ENST00000372755 H0YC42 278 aa11.95□□□□□ -0.5
VCL-202ENST00000372755 ZBTB39O15060 712 aa11.95□□□□□ -0.5
VCL-202ENST00000372755 ITGB3P05106 788 aa11.95□□□□□ -0.5
VCL-202ENST00000372755 PDHBP11177 359 aa11.95□□□□□ -0.5
VCL-202ENST00000372755 DSG1Q02413 1049 aa11.95□□□□□ -0.5
VCL-202ENST00000372755 PDK2Q15119 407 aa11.95□□□□□ -0.5
VCL-202ENST00000372755 RABL6Q3YEC7 729 aaPredicted RBP11.95□□□□□ -0.5
VCL-202ENST00000372755 HDDC2Q7Z4H3 204 aa11.95□□□□□ -0.5
VCL-202ENST00000372755 MYO1HQ8N1T3 1032 aa11.95□□□□□ -0.5
VCL-202ENST00000372755 C19orf60Q96EN9 201 aa11.95□□□□□ -0.5
VCL-202ENST00000372755 IRX2Q9BZI1 471 aaPredicted RBP11.95□□□□□ -0.5
VCL-202ENST00000372755 NMRK2Q9NPI5 230 aa11.95□□□□□ -0.5
VCL-202ENST00000372755 M0QYT0 321 aa11.95□□□□□ -0.5
VCL-202ENST00000372755 STRNO43815 780 aa11.95□□□□□ -0.5
VCL-202ENST00000372755 F9P00740 461 aa11.95□□□□□ -0.5
VCL-202ENST00000372755 NUP62P37198 522 aaPredicted RBP11.95□□□□□ -0.5
VCL-202ENST00000372755 OLFML2BQ68BL8 750 aa11.95□□□□□ -0.5
VCL-202ENST00000372755 NLRP9Q7RTR0 991 aa11.95□□□□□ -0.5
VCL-202ENST00000372755 C11orf74Q86VG3 221 aa11.95□□□□□ -0.5
VCL-202ENST00000372755 APLFQ8IW19 511 aaPredicted RBP11.95□□□□□ -0.5
VCL-202ENST00000372755 NUDT12Q9BQG2 462 aa11.95□□□□□ -0.5
VCL-202ENST00000372755 CNPY3Q9BT09 278 aa11.95□□□□□ -0.5
VCL-202ENST00000372755 TBX20Q9UMR3 447 aa11.95□□□□□ -0.5
VCL-202ENST00000372755 USP42Q9H9J4 1324 aaKnown RBP11.95□□□□□ -0.5
VCL-202ENST00000372755 FAM47E-STBD1D6RA91 191 aa11.95□□□□□ -0.5
VCL-202ENST00000372755 IGF2BP3O00425 579 aaKnown RBP eCLIP11.95□□□□□ -0.5
VCL-202ENST00000372755 ASS1P00966 412 aaKnown RBP11.95□□□□□ -0.5
VCL-202ENST00000372755 UBTFL6P0CB48 400 aaPredicted RBP11.95□□□□□ -0.5
VCL-202ENST00000372755 GARTP22102 1010 aa11.95□□□□□ -0.5
VCL-202ENST00000372755 ALDH7A1P49419 539 aaKnown RBP11.95□□□□□ -0.5
VCL-202ENST00000372755 CYP51A1Q16850 503 aa11.95□□□□□ -0.5
VCL-202ENST00000372755 FAM117BQ6P1L5 589 aa11.95□□□□□ -0.5
VCL-202ENST00000372755 ZNF438Q7Z4V0 828 aa11.95□□□□□ -0.5
VCL-202ENST00000372755 SLC13A5Q86YT5 568 aaPredicted RBP11.95□□□□□ -0.5
VCL-202ENST00000372755 C1orf131Q8NDD1 294 aaKnown RBP11.95□□□□□ -0.5
VCL-202ENST00000372755 BLOC1S5Q8TDH9 187 aa11.95□□□□□ -0.5
VCL-202ENST00000372755 PRRG3Q9BZD7 231 aa11.95□□□□□ -0.5
VCL-202ENST00000372755 CYP39A1Q9NYL5 469 aa11.95□□□□□ -0.5
VCL-202ENST00000372755 LAMC1P11047 1609 aa11.95□□□□□ -0.5
VCL-202ENST00000372755 NRKQ7Z2Y5 1582 aa11.95□□□□□ -0.5
VCL-202ENST00000372755 PMPCBO75439 489 aa11.95□□□□□ -0.5
VCL-202ENST00000372755 ZNF544Q6NX49 715 aa11.95□□□□□ -0.5
VCL-202ENST00000372755 ARID3BQ8IVW6 561 aaPredicted RBP11.95□□□□□ -0.5
VCL-202ENST00000372755 ZNF513Q8N8E2 541 aaPredicted RBP11.95□□□□□ -0.5
VCL-202ENST00000372755 TERB1Q8NA31 727 aa11.95□□□□□ -0.5
VCL-202ENST00000372755 RPRD1AQ96P16 312 aaPredicted RBP11.95□□□□□ -0.5
VCL-202ENST00000372755 ABI2Q9NYB9 513 aaPredicted RBP11.95□□□□□ -0.5
VCL-202ENST00000372755 DYRK1BQ9Y463 629 aa11.95□□□□□ -0.5
VCL-202ENST00000372755 SUPT7LO94864 414 aa11.94□□□□□ -0.5
VCL-202ENST00000372755 GPC1P35052 558 aa11.94□□□□□ -0.5
VCL-202ENST00000372755 CHRNB3Q05901 458 aa11.94□□□□□ -0.5
VCL-202ENST00000372755 ITGA9Q13797 1035 aa11.94□□□□□ -0.5
VCL-202ENST00000372755 RNF180Q86T96 592 aa11.94□□□□□ -0.5
VCL-202ENST00000372755 ZSWIM1Q9BR11 485 aa11.94□□□□□ -0.5
VCL-202ENST00000372755 CAAP1Q9H8G2 361 aa11.94□□□□□ -0.5
VCL-202ENST00000372755 DDIT4Q9NX09 232 aa11.94□□□□□ -0.5
VCL-202ENST00000372755 DRG1Q9Y295 367 aaKnown RBP11.94□□□□□ -0.5
VCL-202ENST00000372755 CRB1P82279 1406 aa11.94□□□□□ -0.5
VCL-202ENST00000372755 SF3B3Q15393 1217 aaKnown RBP11.94□□□□□ -0.5
VCL-202ENST00000372755 FBXW10Q5XX13 1052 aa11.94□□□□□ -0.5
VCL-202ENST00000372755 CELF4Q9BZC1 486 aaKnown RBP11.94□□□□□ -0.5
VCL-202ENST00000372755 KCTD10Q9H3F6 313 aa11.94□□□□□ -0.5
VCL-202ENST00000372755 EFCAB1Q9HAE3 211 aa11.94□□□□□ -0.5
VCL-202ENST00000372755 SCUBE2Q9NQ36 999 aa11.94□□□□□ -0.5
VCL-202ENST00000372755 SYBUQ9NX95 663 aa11.94□□□□□ -0.5
VCL-202ENST00000372755 TRIM10Q9UDY6 481 aa11.94□□□□□ -0.5
VCL-202ENST00000372755 CHRNA5P30532 468 aa11.94□□□□□ -0.5
VCL-202ENST00000372755 CSE1LP55060 971 aaKnown RBP11.94□□□□□ -0.5
VCL-202ENST00000372755 SREBF2Q12772 1141 aa11.94□□□□□ -0.5
VCL-202ENST00000372755 PTGISQ16647 500 aa11.94□□□□□ -0.5
VCL-202ENST00000372755 FUT11Q495W5 492 aa11.94□□□□□ -0.5
VCL-202ENST00000372755 MFSD4BQ5TF39 518 aa11.94□□□□□ -0.5
VCL-202ENST00000372755 LRRC8DQ7L1W4 858 aa11.94□□□□□ -0.5
VCL-202ENST00000372755 OTOAQ7RTW8 1153 aa11.94□□□□□ -0.5
VCL-202ENST00000372755 KIF2BQ8N4N8 673 aa11.94□□□□□ -0.5
VCL-202ENST00000372755 TC2NQ8N9U0 490 aa11.94□□□□□ -0.5
VCL-202ENST00000372755 SGF29Q96ES7 293 aa11.94□□□□□ -0.5
VCL-202ENST00000372755 CARD9Q9H257 536 aa11.94□□□□□ -0.5
VCL-202ENST00000372755 CAPN10Q9HC96 672 aa11.94□□□□□ -0.5
VCL-202ENST00000372755 KCNH7Q9NS40 1196 aa11.94□□□□□ -0.5
VCL-202ENST00000372755 NBNO60934 754 aa11.94□□□□□ -0.5
VCL-202ENST00000372755 DENND5BQ6ZUT9 1274 aa11.94□□□□□ -0.5
VCL-202ENST00000372755 RIN2Q8WYP3 895 aaPredicted RBP11.94□□□□□ -0.5
VCL-202ENST00000372755 MTERF3Q96E29 417 aa11.94□□□□□ -0.5
VCL-202ENST00000372755 DEPDC7Q96QD5 511 aa11.94□□□□□ -0.5
VCL-202ENST00000372755 JMJD4Q9H9V9 463 aa11.94□□□□□ -0.5
VCL-202ENST00000372755 PNMA8BQ9ULN7 279 aaPredicted RBP11.94□□□□□ -0.5
VCL-202ENST00000372755 RUVBL2Q9Y230 463 aaKnown RBP11.94□□□□□ -0.5
VCL-202ENST00000372755 SESN1Q9Y6P5 492 aa11.94□□□□□ -0.5
VCL-202ENST00000372755 MAGEA13PA6NCF6 341 aa11.94□□□□□ -0.5
VCL-202ENST00000372755 GPR182O15218 404 aa11.94□□□□□ -0.5
VCL-202ENST00000372755 RNASEH1O60930 286 aaKnown RBP11.94□□□□□ -0.5
VCL-202ENST00000372755 GRK3P35626 688 aa11.94□□□□□ -0.5
VCL-202ENST00000372755 PSMD7P51665 324 aa11.94□□□□□ -0.5
VCL-202ENST00000372755 OXCT1P55809 520 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms