RNA–Protein interactions for RNA: ENST00000372235.7

TMEM53-201, Transcript of transmembrane protein 53, humanhuman

TSL 2 BASIC

Gene TMEM53, Length 890 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-201ENST00000372235 OVCA2Q8WZ82 227 aa20.11■□□□□ 0.81
TMEM53-201ENST00000372235 GZF1Q9H116 711 aaPredicted RBP20.11■□□□□ 0.81
TMEM53-201ENST00000372235 EPC1Q9H2F5 836 aa20.11■□□□□ 0.81
TMEM53-201ENST00000372235 COMMD8Q9NX08 183 aa20.11■□□□□ 0.81
TMEM53-201ENST00000372235 RAB23Q9ULC3 237 aa20.11■□□□□ 0.81
TMEM53-201ENST00000372235 ARHGAP26Q9UNA1 814 aa20.11■□□□□ 0.81
TMEM53-201ENST00000372235 F8VP50 259 aa20.1■□□□□ 0.81
TMEM53-201ENST00000372235 HCRTO43612 131 aa20.1■□□□□ 0.81
TMEM53-201ENST00000372235 TADA3O75528 432 aa20.1■□□□□ 0.81
TMEM53-201ENST00000372235 NR2F2P24468 414 aa20.1■□□□□ 0.81
TMEM53-201ENST00000372235 SOX9P48436 509 aa20.1■□□□□ 0.81
TMEM53-201ENST00000372235 IFNAR2P48551 515 aa20.1■□□□□ 0.81
TMEM53-201ENST00000372235 CASP4P49662 377 aa20.1■□□□□ 0.81
TMEM53-201ENST00000372235 VAMP7P51809 220 aa20.1■□□□□ 0.81
TMEM53-201ENST00000372235 FBXO43Q4G163 708 aa20.1■□□□□ 0.81
TMEM53-201ENST00000372235 DDX42Q86XP3 938 aaKnown RBP eCLIP20.1■□□□□ 0.81
TMEM53-201ENST00000372235 NUP93Q8N1F7 819 aa20.1■□□□□ 0.81
TMEM53-201ENST00000372235 EBF3Q9H4W6 596 aa20.1■□□□□ 0.81
TMEM53-201ENST00000372235 DUS2Q9NX74 493 aaKnown RBP20.1■□□□□ 0.81
TMEM53-201ENST00000372235 CCL26Q9Y258 94 aa20.1■□□□□ 0.81
TMEM53-201ENST00000372235 COL4A3Q01955 1670 aa20.1■□□□□ 0.81
TMEM53-201ENST00000372235 DENND4CQ5VZ89 1909 aa20.1■□□□□ 0.81
TMEM53-201ENST00000372235 FANCMQ8IYD8 2048 aa20.09■□□□□ 0.81
TMEM53-201ENST00000372235 TRDMT1O14717 391 aaKnown RBP20.09■□□□□ 0.81
TMEM53-201ENST00000372235 SLC9A3R1O14745 358 aaPredicted RBP20.09■□□□□ 0.81
TMEM53-201ENST00000372235 STX10O60499 249 aa20.09■□□□□ 0.81
TMEM53-201ENST00000372235 DRD1P21728 446 aa20.09■□□□□ 0.81
TMEM53-201ENST00000372235 HOXA6P31267 233 aa20.09■□□□□ 0.81
TMEM53-201ENST00000372235 PSMC2P35998 433 aaKnown RBP20.09■□□□□ 0.81
TMEM53-201ENST00000372235 FOXK2Q01167 660 aa20.09■□□□□ 0.81
TMEM53-201ENST00000372235 TNK2Q07912 1038 aa20.09■□□□□ 0.81
TMEM53-201ENST00000372235 CCINQ13939 588 aa20.09■□□□□ 0.81
TMEM53-201ENST00000372235 PON2Q15165 354 aa20.09■□□□□ 0.81
TMEM53-201ENST00000372235 EDRF1Q3B7T1 1238 aa20.09■□□□□ 0.81
TMEM53-201ENST00000372235 SUMF1Q8NBK3 374 aa20.09■□□□□ 0.81
TMEM53-201ENST00000372235 SMARCD1Q96GM5 515 aa20.09■□□□□ 0.81
TMEM53-201ENST00000372235 FAXDC2Q96IV6 333 aa20.09■□□□□ 0.81
TMEM53-201ENST00000372235 GCNT4Q9P109 453 aa20.09■□□□□ 0.81
TMEM53-201ENST00000372235 NCDNQ9UBB6 729 aa20.09■□□□□ 0.81
TMEM53-201ENST00000372235 USP34Q70CQ2 3546 aa20.08■□□□□ 0.81
TMEM53-201ENST00000372235 NFATC1O95644 943 aa20.08■□□□□ 0.81
TMEM53-201ENST00000372235 GTF2H1P32780 548 aa20.08■□□□□ 0.81
TMEM53-201ENST00000372235 PIK3CAP42336 1068 aa20.08■□□□□ 0.81
TMEM53-201ENST00000372235 USP4Q13107 963 aa20.08■□□□□ 0.81
TMEM53-201ENST00000372235 ADAM9Q13443 819 aa20.08■□□□□ 0.81
TMEM53-201ENST00000372235 ZNF77Q15935 545 aa20.08■□□□□ 0.81
TMEM53-201ENST00000372235 TMEM196Q5HYL7 178 aa20.08■□□□□ 0.81
TMEM53-201ENST00000372235 TXNDC11Q6PKC3 985 aa20.08■□□□□ 0.81
TMEM53-201ENST00000372235 SV2AQ7L0J3 742 aa20.08■□□□□ 0.81
TMEM53-201ENST00000372235 TTC39CQ8N584 583 aa20.08■□□□□ 0.81
TMEM53-201ENST00000372235 ARL14EPQ8N8R7 260 aaPredicted RBP20.08■□□□□ 0.81
TMEM53-201ENST00000372235 TTC8Q8TAM2 541 aa20.08■□□□□ 0.81
TMEM53-201ENST00000372235 PLEKHO2Q8TD55 490 aa20.08■□□□□ 0.81
TMEM53-201ENST00000372235 MED10Q9BTT4 135 aa20.08■□□□□ 0.81
TMEM53-201ENST00000372235 DMAP1Q9NPF5 467 aaPredicted RBP20.08■□□□□ 0.81
TMEM53-201ENST00000372235 HPS4Q9NQG7 708 aa20.08■□□□□ 0.81
TMEM53-201ENST00000372235 CACNA1IQ9P0X4 2223 aa20.08■□□□□ 0.8
TMEM53-201ENST00000372235 ZNF840PA6NDX5 716 aa20.07■□□□□ 0.8
TMEM53-201ENST00000372235 SMC2O95347 1197 aa20.07■□□□□ 0.8
TMEM53-201ENST00000372235 ASS1P00966 412 aaKnown RBP20.07■□□□□ 0.8
TMEM53-201ENST00000372235 YWHAQP27348 245 aa20.07■□□□□ 0.8
TMEM53-201ENST00000372235 SLC7A9P82251 487 aa20.07■□□□□ 0.8
TMEM53-201ENST00000372235 CCDC142Q17RM4 750 aa20.07■□□□□ 0.8
TMEM53-201ENST00000372235 FAM186BQ8IYM0 893 aa20.07■□□□□ 0.8
TMEM53-201ENST00000372235 SH3RF2Q8TEC5 729 aa20.07■□□□□ 0.8
TMEM53-201ENST00000372235 GSDMAQ96QA5 445 aa20.07■□□□□ 0.8
TMEM53-201ENST00000372235 CYP2S1Q96SQ9 504 aa20.07■□□□□ 0.8
TMEM53-201ENST00000372235 B3GNT5Q9BYG0 378 aa20.07■□□□□ 0.8
TMEM53-201ENST00000372235 DPEP3Q9H4B8 488 aa20.07■□□□□ 0.8
TMEM53-201ENST00000372235 SMYD3Q9H7B4 428 aa20.07■□□□□ 0.8
TMEM53-201ENST00000372235 ECT2Q9H8V3 914 aa20.07■□□□□ 0.8
TMEM53-201ENST00000372235 CYP3A43Q9HB55 503 aa20.07■□□□□ 0.8
TMEM53-201ENST00000372235 GMEB2Q9UKD1 530 aa20.07■□□□□ 0.8
TMEM53-201ENST00000372235 ZNF638Q14966 1978 aaKnown RBP20.06■□□□□ 0.8
TMEM53-201ENST00000372235 F5P12259 2224 aa20.06■□□□□ 0.8
TMEM53-201ENST00000372235 C2orf78A6NCI8 922 aa20.06■□□□□ 0.8
TMEM53-201ENST00000372235 OBSL1O75147 1896 aa20.06■□□□□ 0.8
TMEM53-201ENST00000372235 VNN1O95497 513 aa20.06■□□□□ 0.8
TMEM53-201ENST00000372235 TDGF1P13385 188 aa20.06■□□□□ 0.8
TMEM53-201ENST00000372235 SDHBP21912 280 aa20.06■□□□□ 0.8
TMEM53-201ENST00000372235 DLG4P78352 724 aa20.06■□□□□ 0.8
TMEM53-201ENST00000372235 TSSK4Q6SA08 328 aa20.06■□□□□ 0.8
TMEM53-201ENST00000372235 LONP2Q86WA8 852 aa20.06■□□□□ 0.8
TMEM53-201ENST00000372235 CRYBG2Q8N1P7 616 aa20.06■□□□□ 0.8
TMEM53-201ENST00000372235 P2RY13Q9BPV8 354 aa20.06■□□□□ 0.8
TMEM53-201ENST00000372235 ZNF518BQ9C0D4 1074 aa20.06■□□□□ 0.8
TMEM53-201ENST00000372235 FBXO44Q9H4M3 255 aa20.06■□□□□ 0.8
TMEM53-201ENST00000372235 FAM124BQ9H5Z6 455 aaPredicted RBP20.06■□□□□ 0.8
TMEM53-201ENST00000372235 SMG5Q9UPR3 1016 aaKnown RBP20.06■□□□□ 0.8
TMEM53-201ENST00000372235 ZFHX2Q9C0A1 2572 aaPredicted RBP20.05■□□□□ 0.8
TMEM53-201ENST00000372235 KIF26AQ9ULI4 1882 aaPredicted RBP20.05■□□□□ 0.8
TMEM53-201ENST00000372235 CCDC163A0A0D9SF12 145 aa20.05■□□□□ 0.8
TMEM53-201ENST00000372235 CETN3O15182 167 aa20.05■□□□□ 0.8
TMEM53-201ENST00000372235 ABL1P00519 1130 aa20.05■□□□□ 0.8
TMEM53-201ENST00000372235 PRR29P0C7W0 189 aa20.05■□□□□ 0.8
TMEM53-201ENST00000372235 TUBP50607 506 aa20.05■□□□□ 0.8
TMEM53-201ENST00000372235 CDH8P55286 799 aa20.05■□□□□ 0.8
TMEM53-201ENST00000372235 SATB1Q01826 763 aa20.05■□□□□ 0.8
TMEM53-201ENST00000372235 TAF10Q12962 218 aa20.05■□□□□ 0.8
TMEM53-201ENST00000372235 TRIM68Q6AZZ1 485 aa20.05■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms