RNA–Protein interactions for RNA: ENST00000370651.5

PTP4A1-201, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTP4A1, Length 5,088 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-201ENST00000370651 RIOX1Q9H6W3 641 aa17.76■□□□□ 0.43
PTP4A1-201ENST00000370651 GPBP1L1Q9HC44 474 aaPredicted RBP17.76■□□□□ 0.43
PTP4A1-201ENST00000370651 TIMM44O43615 452 aa17.76■□□□□ 0.43
PTP4A1-201ENST00000370651 ATP6V1E1P36543 226 aa17.76■□□□□ 0.43
PTP4A1-201ENST00000370651 CACNB2Q08289 660 aaPredicted RBP17.76■□□□□ 0.43
PTP4A1-201ENST00000370651 SLC25A41Q8N5S1 370 aa17.76■□□□□ 0.43
PTP4A1-201ENST00000370651 SLC7A14Q8TBB6 771 aa17.76■□□□□ 0.43
PTP4A1-201ENST00000370651 AGAP11Q8TF27 550 aa17.76■□□□□ 0.43
PTP4A1-201ENST00000370651 SMARCAD1Q9H4L7 1026 aa17.76■□□□□ 0.43
PTP4A1-201ENST00000370651 SAR1AQ9NR31 198 aa17.76■□□□□ 0.43
PTP4A1-201ENST00000370651 SATB2Q9UPW6 733 aa17.76■□□□□ 0.43
PTP4A1-201ENST00000370651 PIN4Q9Y237 131 aaKnown RBP17.76■□□□□ 0.43
PTP4A1-201ENST00000370651 FKBP9O95302 570 aa17.76■□□□□ 0.43
PTP4A1-201ENST00000370651 GARTP22102 1010 aa17.76■□□□□ 0.43
PTP4A1-201ENST00000370651 RPL10AP62906 217 aaKnown RBP17.76■□□□□ 0.43
PTP4A1-201ENST00000370651 BMPR2Q13873 1038 aa17.76■□□□□ 0.43
PTP4A1-201ENST00000370651 IER5Q5VY09 327 aa17.76■□□□□ 0.43
PTP4A1-201ENST00000370651 PDPK2PQ6A1A2 396 aa17.76■□□□□ 0.43
PTP4A1-201ENST00000370651 EP400NLQ6ZTU2 488 aa17.76■□□□□ 0.43
PTP4A1-201ENST00000370651 FKBP9P1Q75LS8 142 aa17.76■□□□□ 0.43
PTP4A1-201ENST00000370651 LZICQ8WZA0 190 aa17.76■□□□□ 0.43
PTP4A1-201ENST00000370651 FAR2Q96K12 515 aa17.76■□□□□ 0.43
PTP4A1-201ENST00000370651 SOX13Q9UN79 622 aa17.76■□□□□ 0.43
PTP4A1-201ENST00000370651 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.76■□□□□ 0.43
PTP4A1-201ENST00000370651 SLIT1O75093 1534 aa17.76■□□□□ 0.43
PTP4A1-201ENST00000370651 GYS1P13807 737 aa17.75■□□□□ 0.43
PTP4A1-201ENST00000370651 TBL3Q12788 808 aaKnown RBP17.75■□□□□ 0.43
PTP4A1-201ENST00000370651 PDK2Q15119 407 aa17.75■□□□□ 0.43
PTP4A1-201ENST00000370651 ERMARDQ5T6L9 678 aa17.75■□□□□ 0.43
PTP4A1-201ENST00000370651 WDR59Q6PJI9 974 aa17.75■□□□□ 0.43
PTP4A1-201ENST00000370651 CRELD2Q6UXH1 353 aaPredicted RBP17.75■□□□□ 0.43
PTP4A1-201ENST00000370651 APBB2Q92870 758 aa17.75■□□□□ 0.43
PTP4A1-201ENST00000370651 OXNAD1Q96HP4 312 aaPredicted RBP17.75■□□□□ 0.43
PTP4A1-201ENST00000370651 RNPEPL1Q9HAU8 725 aa17.75■□□□□ 0.43
PTP4A1-201ENST00000370651 TJP2Q9UDY2 1190 aa17.75■□□□□ 0.43
PTP4A1-201ENST00000370651 NPTX2P47972 431 aa17.75■□□□□ 0.43
PTP4A1-201ENST00000370651 Q4G0T1 1027 aa17.75■□□□□ 0.43
PTP4A1-201ENST00000370651 ACBD5Q5T8D3 534 aaPredicted RBP17.75■□□□□ 0.43
PTP4A1-201ENST00000370651 P3H2Q8IVL5 708 aa17.75■□□□□ 0.43
PTP4A1-201ENST00000370651 PSMC6P62333 389 aa17.75■□□□□ 0.43
PTP4A1-201ENST00000370651 RUNX1T1Q06455 604 aa17.75■□□□□ 0.43
PTP4A1-201ENST00000370651 PKN2Q16513 984 aaKnown RBP17.75■□□□□ 0.43
PTP4A1-201ENST00000370651 RRM2BQ7LG56 351 aa17.75■□□□□ 0.43
PTP4A1-201ENST00000370651 PATL1Q86TB9 770 aaKnown RBP17.75■□□□□ 0.43
PTP4A1-201ENST00000370651 PRMT7Q9NVM4 692 aaPredicted RBP17.75■□□□□ 0.43
PTP4A1-201ENST00000370651 LMCD1Q9NZU5 365 aa17.75■□□□□ 0.43
PTP4A1-201ENST00000370651 CYP2C8P10632 490 aa17.75■□□□□ 0.43
PTP4A1-201ENST00000370651 CPA3P15088 417 aa17.75■□□□□ 0.43
PTP4A1-201ENST00000370651 PECAM1P16284 738 aaPredicted RBP17.75■□□□□ 0.43
PTP4A1-201ENST00000370651 PTK2BQ14289 1009 aa17.75■□□□□ 0.43
PTP4A1-201ENST00000370651 ZNF662Q6ZS27 426 aa17.75■□□□□ 0.43
PTP4A1-201ENST00000370651 SV2AQ7L0J3 742 aa17.75■□□□□ 0.43
PTP4A1-201ENST00000370651 LINC00523Q86TU6 105 aa17.75■□□□□ 0.43
PTP4A1-201ENST00000370651 CCDC60Q8IWA6 550 aaPredicted RBP17.75■□□□□ 0.43
PTP4A1-201ENST00000370651 MCOLN2Q8IZK6 566 aa17.75■□□□□ 0.43
PTP4A1-201ENST00000370651 ZNF75CPQ92670 426 aaPredicted RBP17.75■□□□□ 0.43
PTP4A1-201ENST00000370651 C17orf80Q9BSJ5 609 aa17.75■□□□□ 0.43
PTP4A1-201ENST00000370651 BLOC1S4Q9NUP1 217 aa17.75■□□□□ 0.43
PTP4A1-201ENST00000370651 CD163L1Q9NR16 1453 aa17.74■□□□□ 0.43
PTP4A1-201ENST00000370651 PYGLP06737 847 aa17.74■□□□□ 0.43
PTP4A1-201ENST00000370651 MIEF2Q96C03 454 aa17.74■□□□□ 0.43
PTP4A1-201ENST00000370651 ASB14A6NK59 587 aa17.74■□□□□ 0.43
PTP4A1-201ENST00000370651 MTFR1Q15390 333 aa17.74■□□□□ 0.43
PTP4A1-201ENST00000370651 TMEM119Q4V9L6 283 aa17.74■□□□□ 0.43
PTP4A1-201ENST00000370651 SEZ6Q53EL9 994 aa17.74■□□□□ 0.43
PTP4A1-201ENST00000370651 RNF219Q5W0B1 726 aaPredicted RBP17.74■□□□□ 0.43
PTP4A1-201ENST00000370651 RBBP8Q99708 897 aa17.74■□□□□ 0.43
PTP4A1-201ENST00000370651 EXOSC4Q9NPD3 245 aaKnown RBP17.74■□□□□ 0.43
PTP4A1-201ENST00000370651 FAM32AQ9Y421 112 aaKnown RBP17.74■□□□□ 0.43
PTP4A1-201ENST00000370651 ADGRA2Q96PE1 1338 aa17.74■□□□□ 0.43
PTP4A1-201ENST00000370651 FAM58BPP0C7Q3 252 aa17.74■□□□□ 0.43
PTP4A1-201ENST00000370651 ARP10275 920 aa17.74■□□□□ 0.43
PTP4A1-201ENST00000370651 KRT33BQ14525 404 aa17.74■□□□□ 0.43
PTP4A1-201ENST00000370651 LRRC71Q8N4P6 559 aa17.74■□□□□ 0.43
PTP4A1-201ENST00000370651 CD274Q9NZQ7 290 aa17.74■□□□□ 0.43
PTP4A1-201ENST00000370651 RCCD1A6NED2 376 aa17.74■□□□□ 0.43
PTP4A1-201ENST00000370651 SUPT7LO94864 414 aa17.74■□□□□ 0.43
PTP4A1-201ENST00000370651 ITGB3P05106 788 aa17.74■□□□□ 0.43
PTP4A1-201ENST00000370651 ZNF23P17027 643 aa17.74■□□□□ 0.43
PTP4A1-201ENST00000370651 PTPN7P35236 360 aa17.74■□□□□ 0.43
PTP4A1-201ENST00000370651 MRPL28Q13084 256 aaKnown RBP17.74■□□□□ 0.43
PTP4A1-201ENST00000370651 TKFCQ3LXA3 575 aa17.74■□□□□ 0.43
PTP4A1-201ENST00000370651 CKAP2Q8WWK9 683 aa17.74■□□□□ 0.43
PTP4A1-201ENST00000370651 OPTNQ96CV9 577 aa17.74■□□□□ 0.43
PTP4A1-201ENST00000370651 MAML3Q96JK9 1138 aa17.74■□□□□ 0.43
PTP4A1-201ENST00000370651 GCNAQ96QF7 691 aa17.74■□□□□ 0.43
PTP4A1-201ENST00000370651 MMTAG2Q9BU76 263 aaKnown RBP17.74■□□□□ 0.43
PTP4A1-201ENST00000370651 CYP39A1Q9NYL5 469 aa17.74■□□□□ 0.43
PTP4A1-201ENST00000370651 AGAP9Q5VTM2 703 aa17.73■□□□□ 0.43
PTP4A1-201ENST00000370651 TAAR1Q96RJ0 339 aa17.73■□□□□ 0.43
PTP4A1-201ENST00000370651 LRRC40Q9H9A6 602 aa17.73■□□□□ 0.43
PTP4A1-201ENST00000370651 SLCO1B7G3V0H7 640 aa17.73■□□□□ 0.43
PTP4A1-201ENST00000370651 NFIBO00712 420 aa17.73■□□□□ 0.43
PTP4A1-201ENST00000370651 AMPD2Q01433 879 aa17.73■□□□□ 0.43
PTP4A1-201ENST00000370651 CYP24A1Q07973 514 aa17.73■□□□□ 0.43
PTP4A1-201ENST00000370651 CCDC81Q6ZN84 652 aa17.73■□□□□ 0.43
PTP4A1-201ENST00000370651 ZBTB49Q6ZSB9 765 aa17.73■□□□□ 0.43
PTP4A1-201ENST00000370651 TRAPPC9Q96Q05 1148 aa17.73■□□□□ 0.43
PTP4A1-201ENST00000370651 ECSITQ9BQ95 431 aa17.73■□□□□ 0.43
PTP4A1-201ENST00000370651 DNAJC18Q9H819 358 aa17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms