RNA–Protein interactions for RNA: ENST00000368841.6

SNX27-202, Transcript of sorting nexin family member 27, humanhuman

TSL 1 (best)

Gene SNX27, Length 7,070 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-202ENST00000368841 RPS6KB2Q9UBS0 482 aa18.81■□□□□ 0.6
SNX27-202ENST00000368841 FAM107AO95990 144 aa18.81■□□□□ 0.6
SNX27-202ENST00000368841 PCSK1P29120 753 aa18.81■□□□□ 0.6
SNX27-202ENST00000368841 NR1I3Q14994 352 aa18.81■□□□□ 0.6
SNX27-202ENST00000368841 POLD3Q15054 466 aaPredicted RBP18.81■□□□□ 0.6
SNX27-202ENST00000368841 DNAL1Q4LDG9 190 aa18.81■□□□□ 0.6
SNX27-202ENST00000368841 UXS1Q8NBZ7 420 aa18.81■□□□□ 0.6
SNX27-202ENST00000368841 PACSIN1Q9BY11 444 aa18.81■□□□□ 0.6
SNX27-202ENST00000368841 RFC5P40937 340 aa18.81■□□□□ 0.6
SNX27-202ENST00000368841 EXOSC10Q01780 885 aaKnown RBP18.81■□□□□ 0.6
SNX27-202ENST00000368841 CAMK2GQ13555 558 aaPredicted RBP18.81■□□□□ 0.6
SNX27-202ENST00000368841 KRT78Q8N1N4 520 aa18.81■□□□□ 0.6
SNX27-202ENST00000368841 NIF3L1Q9GZT8 377 aa18.81■□□□□ 0.6
SNX27-202ENST00000368841 C2orf81A6NN90 581 aa18.81■□□□□ 0.6
SNX27-202ENST00000368841 ERVK-10P10266 1014 aa18.81■□□□□ 0.6
SNX27-202ENST00000368841 EFHC1Q5JVL4 640 aa18.81■□□□□ 0.6
SNX27-202ENST00000368841 TRIM65Q6PJ69 517 aa18.81■□□□□ 0.6
SNX27-202ENST00000368841 PRR23CQ6ZRP0 262 aa18.81■□□□□ 0.6
SNX27-202ENST00000368841 USP13Q92995 863 aaPredicted RBP18.81■□□□□ 0.6
SNX27-202ENST00000368841 PGLYRP2Q96PD5 576 aa18.81■□□□□ 0.6
SNX27-202ENST00000368841 WDR35Q9P2L0 1181 aa18.81■□□□□ 0.6
SNX27-202ENST00000368841 CBX4O00257 560 aa18.81■□□□□ 0.6
SNX27-202ENST00000368841 CCDC15Q0P6D6 951 aa18.81■□□□□ 0.6
SNX27-202ENST00000368841 GLMNQ92990 594 aa18.81■□□□□ 0.6
SNX27-202ENST00000368841 RSAD1Q9HA92 442 aa18.81■□□□□ 0.6
SNX27-202ENST00000368841 NT5MQ9NPB1 228 aa18.81■□□□□ 0.6
SNX27-202ENST00000368841 RHBDL2Q9NX52 303 aa18.81■□□□□ 0.6
SNX27-202ENST00000368841 NCAPD2Q15021 1401 aa18.8■□□□□ 0.6
SNX27-202ENST00000368841 ZNF23P17027 643 aa18.8■□□□□ 0.6
SNX27-202ENST00000368841 ATP6V1B2P21281 511 aa18.8■□□□□ 0.6
SNX27-202ENST00000368841 CUL2Q13617 745 aa18.8■□□□□ 0.6
SNX27-202ENST00000368841 LAMC2Q13753 1193 aa18.8■□□□□ 0.6
SNX27-202ENST00000368841 UGP2Q16851 508 aa18.8■□□□□ 0.6
SNX27-202ENST00000368841 RNF180Q86T96 592 aa18.8■□□□□ 0.6
SNX27-202ENST00000368841 ARID3BQ8IVW6 561 aaPredicted RBP18.8■□□□□ 0.6
SNX27-202ENST00000368841 ADGRF2Q8IZF7 708 aa18.8■□□□□ 0.6
SNX27-202ENST00000368841 STAMBPL1Q96FJ0 436 aa18.8■□□□□ 0.6
SNX27-202ENST00000368841 OLFML3Q9NRN5 406 aa18.8■□□□□ 0.6
SNX27-202ENST00000368841 IMPAD1Q9NX62 359 aa18.8■□□□□ 0.6
SNX27-202ENST00000368841 HAO1Q9UJM8 370 aa18.8■□□□□ 0.6
SNX27-202ENST00000368841 FCGRTP55899 365 aa18.8■□□□□ 0.6
SNX27-202ENST00000368841 SGMS1Q86VZ5 419 aa18.8■□□□□ 0.6
SNX27-202ENST00000368841 BBS7Q8IWZ6 715 aa18.8■□□□□ 0.6
SNX27-202ENST00000368841 FBXO36Q8NEA4 188 aa18.8■□□□□ 0.6
SNX27-202ENST00000368841 CPA4Q9UI42 421 aa18.8■□□□□ 0.6
SNX27-202ENST00000368841 USP20Q9Y2K6 914 aa18.8■□□□□ 0.6
SNX27-202ENST00000368841 CNTNAP2Q9UHC6 1331 aa18.8■□□□□ 0.6
SNX27-202ENST00000368841 IGSF9BQ9UPX0 1349 aa18.8■□□□□ 0.6
SNX27-202ENST00000368841 GNG14A0A1W2PPG7 69 aa18.8■□□□□ 0.6
SNX27-202ENST00000368841 C19orf81C9J6K1 198 aa18.8■□□□□ 0.6
SNX27-202ENST00000368841 ACADMP11310 421 aa18.8■□□□□ 0.6
SNX27-202ENST00000368841 CKBP12277 381 aa18.8■□□□□ 0.6
SNX27-202ENST00000368841 KLRC1P26715 233 aa18.8■□□□□ 0.6
SNX27-202ENST00000368841 ROGDIQ9GZN7 287 aa18.8■□□□□ 0.6
SNX27-202ENST00000368841 MTIF3Q9H2K0 278 aaKnown RBP18.8■□□□□ 0.6
SNX27-202ENST00000368841 CD248Q9HCU0 757 aa18.8■□□□□ 0.6
SNX27-202ENST00000368841 MEI4A8MW99 385 aa18.8■□□□□ 0.6
SNX27-202ENST00000368841 CFAP99D6REC4 459 aa18.8■□□□□ 0.6
SNX27-202ENST00000368841 CMTM5Q96DZ9 223 aa18.8■□□□□ 0.6
SNX27-202ENST00000368841 CELF6Q96J87 481 aaKnown RBP18.8■□□□□ 0.6
SNX27-202ENST00000368841 RIC8BQ9NVN3 520 aa18.8■□□□□ 0.6
SNX27-202ENST00000368841 LOC102724159A0A0B4J2E5 919 aa18.8■□□□□ 0.6
SNX27-202ENST00000368841 GYPCP04921 128 aa18.8■□□□□ 0.6
SNX27-202ENST00000368841 SLC11A2P49281 568 aa18.8■□□□□ 0.6
SNX27-202ENST00000368841 PWP2Q15269 919 aaKnown RBP18.8■□□□□ 0.6
SNX27-202ENST00000368841 SHROOM1Q2M3G4 852 aaPredicted RBP18.8■□□□□ 0.6
SNX27-202ENST00000368841 DOK6Q6PKX4 331 aa18.8■□□□□ 0.6
SNX27-202ENST00000368841 ISLR2Q6UXK2 745 aa18.8■□□□□ 0.6
SNX27-202ENST00000368841 TFAP2DQ7Z6R9 452 aa18.8■□□□□ 0.6
SNX27-202ENST00000368841 COMMD2Q86X83 199 aa18.8■□□□□ 0.6
SNX27-202ENST00000368841 CASKIN2Q8WXE0 1202 aa18.8■□□□□ 0.6
SNX27-202ENST00000368841 MCM8Q9UJA3 840 aa18.8■□□□□ 0.6
SNX27-202ENST00000368841 APPL1Q9UKG1 709 aa18.8■□□□□ 0.6
SNX27-202ENST00000368841 HECW2Q9P2P5 1572 aa18.79■□□□□ 0.6
SNX27-202ENST00000368841 C16orf96A6NNT2 1141 aa18.79■□□□□ 0.6
SNX27-202ENST00000368841 EIF3HO15372 352 aaKnown RBP eCLIP18.79■□□□□ 0.6
SNX27-202ENST00000368841 NFICP08651 508 aa18.79■□□□□ 0.6
SNX27-202ENST00000368841 KLHDC7AQ5VTJ3 777 aa18.79■□□□□ 0.6
SNX27-202ENST00000368841 TTC33Q6PID6 262 aaPredicted RBP18.79■□□□□ 0.6
SNX27-202ENST00000368841 SRLQ86TD4 932 aa18.79■□□□□ 0.6
SNX27-202ENST00000368841 MICU2Q8IYU8 434 aa18.79■□□□□ 0.6
SNX27-202ENST00000368841 CALML6Q8TD86 181 aa18.79■□□□□ 0.6
SNX27-202ENST00000368841 CNTNAP5Q8WYK1 1306 aa18.79■□□□□ 0.6
SNX27-202ENST00000368841 LTFP02788 710 aa18.79■□□□□ 0.6
SNX27-202ENST00000368841 CNTN1Q12860 1018 aa18.79■□□□□ 0.6
SNX27-202ENST00000368841 TRIM32Q13049 653 aa18.79■□□□□ 0.6
SNX27-202ENST00000368841 UTP6Q9NYH9 597 aaKnown RBP18.79■□□□□ 0.6
SNX27-202ENST00000368841 GRID1Q9ULK0 1009 aa18.79■□□□□ 0.6
SNX27-202ENST00000368841 RPS6KL1Q9Y6S9 549 aa18.79■□□□□ 0.6
SNX27-202ENST00000368841 TNS3Q68CZ2 1445 aa18.79■□□□□ 0.6
SNX27-202ENST00000368841 ALBP02768 609 aa18.79■□□□□ 0.6
SNX27-202ENST00000368841 CKMP06732 381 aa18.79■□□□□ 0.6
SNX27-202ENST00000368841 CETPP11597 493 aa18.79■□□□□ 0.6
SNX27-202ENST00000368841 ADRA2BP18089 450 aa18.79■□□□□ 0.6
SNX27-202ENST00000368841 SERPINB3P29508 390 aa18.79■□□□□ 0.6
SNX27-202ENST00000368841 EDEM1Q92611 657 aa18.79■□□□□ 0.6
SNX27-202ENST00000368841 LPAR1Q92633 364 aa18.79■□□□□ 0.6
SNX27-202ENST00000368841 ZFYVE1Q9HBF4 777 aa18.79■□□□□ 0.6
SNX27-202ENST00000368841 EIF3LQ9Y262 564 aaKnown RBP18.79■□□□□ 0.6
SNX27-202ENST00000368841 ZNF521Q96K83 1311 aa18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 165.4 ms