RNA–Protein interactions for RNA: ENST00000368662.9

TUBE1-202, Transcript of tubulin epsilon 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBE1, Length 2,142 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-202ENST00000368662 C5orf67F2Z3F1 127 aa12.98□□□□□ -0.33
TUBE1-202ENST00000368662 ATMINO43313 823 aaPredicted RBP12.98□□□□□ -0.33
TUBE1-202ENST00000368662 MOCS3O95396 460 aa12.98□□□□□ -0.33
TUBE1-202ENST00000368662 ERBB2P04626 1255 aa12.98□□□□□ -0.33
TUBE1-202ENST00000368662 OR4Q2P0C623 313 aa12.98□□□□□ -0.33
TUBE1-202ENST00000368662 BDNFP23560 247 aa12.98□□□□□ -0.33
TUBE1-202ENST00000368662 MAGEA11P43364 429 aa12.98□□□□□ -0.33
TUBE1-202ENST00000368662 UBE3AQ05086 875 aa12.98□□□□□ -0.33
TUBE1-202ENST00000368662 MAMLD1Q13495 774 aa12.98□□□□□ -0.33
TUBE1-202ENST00000368662 C2CD6Q53TS8 623 aa12.98□□□□□ -0.33
TUBE1-202ENST00000368662 PRSS55Q6UWB4 352 aaPredicted RBP12.98□□□□□ -0.33
TUBE1-202ENST00000368662 PIGZQ86VD9 579 aa12.98□□□□□ -0.33
TUBE1-202ENST00000368662 XYLT1Q86Y38 959 aa12.98□□□□□ -0.33
TUBE1-202ENST00000368662 IRX2Q9BZI1 471 aaPredicted RBP12.98□□□□□ -0.33
TUBE1-202ENST00000368662 LRRC4Q9HBW1 653 aa12.98□□□□□ -0.33
TUBE1-202ENST00000368662 OSGEPQ9NPF4 335 aa12.98□□□□□ -0.33
TUBE1-202ENST00000368662 KIAA1671Q9BY89 1806 aa12.97□□□□□ -0.33
TUBE1-202ENST00000368662 TULP2O00295 520 aa12.97□□□□□ -0.33
TUBE1-202ENST00000368662 TRIM66O15016 1216 aa12.97□□□□□ -0.33
TUBE1-202ENST00000368662 SCNN1AP37088 669 aa12.97□□□□□ -0.33
TUBE1-202ENST00000368662 RGS7P49802 495 aa12.97□□□□□ -0.33
TUBE1-202ENST00000368662 RABGGTBP53611 331 aa12.97□□□□□ -0.33
TUBE1-202ENST00000368662 CYP4A22Q5TCH4 519 aa12.97□□□□□ -0.33
TUBE1-202ENST00000368662 TPCN2Q8NHX9 752 aa12.97□□□□□ -0.33
TUBE1-202ENST00000368662 MCRS1Q96EZ8 462 aa12.97□□□□□ -0.33
TUBE1-202ENST00000368662 SMOQ99835 787 aa12.97□□□□□ -0.33
TUBE1-202ENST00000368662 C11orf84Q9BUA3 381 aaPredicted RBP12.97□□□□□ -0.33
TUBE1-202ENST00000368662 SELENOOQ9BVL4 669 aa12.97□□□□□ -0.33
TUBE1-202ENST00000368662 ABI2Q9NYB9 513 aaPredicted RBP12.97□□□□□ -0.33
TUBE1-202ENST00000368662 FNIP2Q9P278 1114 aa12.97□□□□□ -0.33
TUBE1-202ENST00000368662 CAPN6Q9Y6Q1 641 aa12.97□□□□□ -0.33
TUBE1-202ENST00000368662 RANBP2P49792 3224 aaKnown RBP12.97□□□□□ -0.33
TUBE1-202ENST00000368662 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.97□□□□□ -0.33
TUBE1-202ENST00000368662 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.97□□□□□ -0.33
TUBE1-202ENST00000368662 SIGLEC16A6NMB1 481 aa12.97□□□□□ -0.33
TUBE1-202ENST00000368662 C2CD2LO14523 706 aa12.97□□□□□ -0.33
TUBE1-202ENST00000368662 FBXO21O94952 628 aa12.97□□□□□ -0.33
TUBE1-202ENST00000368662 CTSAP10619 480 aa12.97□□□□□ -0.33
TUBE1-202ENST00000368662 KRT3P12035 628 aa12.97□□□□□ -0.33
TUBE1-202ENST00000368662 OR1D2P34982 312 aa12.97□□□□□ -0.33
TUBE1-202ENST00000368662 GRIK1P39086 918 aa12.97□□□□□ -0.33
TUBE1-202ENST00000368662 ARPP19P56211 112 aa12.97□□□□□ -0.33
TUBE1-202ENST00000368662 DNTTIP2Q5QJE6 756 aaKnown RBP12.97□□□□□ -0.33
TUBE1-202ENST00000368662 TPGS2Q68CL5 300 aa12.97□□□□□ -0.33
TUBE1-202ENST00000368662 DCUN1D2Q6PH85 259 aa12.97□□□□□ -0.33
TUBE1-202ENST00000368662 RSPO2Q6UXX9 243 aaPredicted RBP12.97□□□□□ -0.33
TUBE1-202ENST00000368662 SIX6OS1Q8N1H7 587 aa12.97□□□□□ -0.33
TUBE1-202ENST00000368662 ZBP1Q9H171 429 aa12.97□□□□□ -0.33
TUBE1-202ENST00000368662 HSFX1Q9UBD0 423 aa12.97□□□□□ -0.33
TUBE1-202ENST00000368662 MAFFQ9ULX9 164 aa12.97□□□□□ -0.33
TUBE1-202ENST00000368662 COG5Q9UP83 839 aa12.97□□□□□ -0.33
TUBE1-202ENST00000368662 TCRBV5S1A1TA0A578 114 aa12.96□□□□□ -0.33
TUBE1-202ENST00000368662 MTMR11A4FU01 709 aa12.96□□□□□ -0.33
TUBE1-202ENST00000368662 MYO1FO00160 1098 aa12.96□□□□□ -0.33
TUBE1-202ENST00000368662 SART1O43290 800 aaKnown RBP12.96□□□□□ -0.33
TUBE1-202ENST00000368662 BEST1O76090 585 aa12.96□□□□□ -0.33
TUBE1-202ENST00000368662 BMP8BP34820 402 aa12.96□□□□□ -0.33
TUBE1-202ENST00000368662 ROR1Q01973 937 aa12.96□□□□□ -0.33
TUBE1-202ENST00000368662 RAB41Q5JT25 222 aa12.96□□□□□ -0.33
TUBE1-202ENST00000368662 OR6B2Q6IFH4 312 aa12.96□□□□□ -0.33
TUBE1-202ENST00000368662 C11orf63Q6NUN7 778 aa12.96□□□□□ -0.33
TUBE1-202ENST00000368662 DAAM2Q86T65 1068 aa12.96□□□□□ -0.33
TUBE1-202ENST00000368662 SLC35F6Q8N357 371 aa12.96□□□□□ -0.33
TUBE1-202ENST00000368662 ZMIZ2Q8NF64 920 aa12.96□□□□□ -0.33
TUBE1-202ENST00000368662 KIF18AQ8NI77 898 aa12.96□□□□□ -0.33
TUBE1-202ENST00000368662 ZNF461Q8TAF7 563 aa12.96□□□□□ -0.33
TUBE1-202ENST00000368662 FEZF2Q8TBJ5 459 aa12.96□□□□□ -0.33
TUBE1-202ENST00000368662 C8orf48Q96LL4 319 aa12.96□□□□□ -0.33
TUBE1-202ENST00000368662 CEP295NLQ96MC4 621 aa12.96□□□□□ -0.33
TUBE1-202ENST00000368662 TGS1Q96RS0 853 aaKnown RBP12.96□□□□□ -0.33
TUBE1-202ENST00000368662 KCNK16Q96T55 309 aa12.96□□□□□ -0.33
TUBE1-202ENST00000368662 CLSTN3Q9BQT9 956 aa12.96□□□□□ -0.33
TUBE1-202ENST00000368662 AFF4Q9UHB7 1163 aaKnown RBP12.96□□□□□ -0.33
TUBE1-202ENST00000368662 ANAPC7Q9UJX3 599 aa12.96□□□□□ -0.33
TUBE1-202ENST00000368662 JRKLQ9Y4A0 524 aa12.96□□□□□ -0.33
TUBE1-202ENST00000368662 IRAK3Q9Y616 596 aa12.96□□□□□ -0.33
TUBE1-202ENST00000368662 H0YGN5 161 aa12.95□□□□□ -0.34
TUBE1-202ENST00000368662 PALMO75781 387 aa12.95□□□□□ -0.34
TUBE1-202ENST00000368662 CA3P07451 260 aa12.95□□□□□ -0.34
TUBE1-202ENST00000368662 LCP1P13796 627 aa12.95□□□□□ -0.34
TUBE1-202ENST00000368662 CYP2F1P24903 491 aa12.95□□□□□ -0.34
TUBE1-202ENST00000368662 CASQ1P31415 396 aa12.95□□□□□ -0.34
TUBE1-202ENST00000368662 NDUFV1P49821 464 aa12.95□□□□□ -0.34
TUBE1-202ENST00000368662 SLC6A3Q01959 620 aa12.95□□□□□ -0.34
TUBE1-202ENST00000368662 RAB30Q15771 203 aa12.95□□□□□ -0.34
TUBE1-202ENST00000368662 PPP1R15BQ5SWA1 713 aa12.95□□□□□ -0.34
TUBE1-202ENST00000368662 FAM102AQ5T9C2 384 aaPredicted RBP12.95□□□□□ -0.34
TUBE1-202ENST00000368662 SYT10Q6XYQ8 523 aa12.95□□□□□ -0.34
TUBE1-202ENST00000368662 FAM183BPQ6ZVS7 135 aa12.95□□□□□ -0.34
TUBE1-202ENST00000368662 ARCQ7LC44 396 aa12.95□□□□□ -0.34
TUBE1-202ENST00000368662 TMC7Q7Z402 723 aa12.95□□□□□ -0.34
TUBE1-202ENST00000368662 RXFP1Q9HBX9 757 aa12.95□□□□□ -0.34
TUBE1-202ENST00000368662 CNGB3Q9NQW8 809 aa12.95□□□□□ -0.34
TUBE1-202ENST00000368662 TJP2Q9UDY2 1190 aa12.95□□□□□ -0.34
TUBE1-202ENST00000368662 CHORDC1Q9UHD1 332 aaPredicted RBP12.95□□□□□ -0.34
TUBE1-202ENST00000368662 DNAI1Q9UI46 699 aa12.95□□□□□ -0.34
TUBE1-202ENST00000368662 MYH10P35580 1976 aa12.95□□□□□ -0.34
TUBE1-202ENST00000368662 WDR27A2RRH5 827 aa12.95□□□□□ -0.34
TUBE1-202ENST00000368662 GRID2IPA4D2P6 1211 aa12.95□□□□□ -0.34
TUBE1-202ENST00000368662 CTAGE9A4FU28 777 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms