RNA–Protein interactions for RNA: ENST00000367196.3

CTSD-202, Transcript of cathepsin D, humanhuman

TSL 5

Gene CTSD, Length 907 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-202ENST00000367196 C8orf48Q96LL4 319 aa15.82■□□□□ 0.12
CTSD-202ENST00000367196 P2RY13Q9BPV8 354 aa15.82■□□□□ 0.12
CTSD-202ENST00000367196 ECT2Q9H8V3 914 aa15.82■□□□□ 0.12
CTSD-202ENST00000367196 SLC39A2Q9NP94 309 aa15.82■□□□□ 0.12
CTSD-202ENST00000367196 USP25Q9UHP3 1055 aa15.82■□□□□ 0.12
CTSD-202ENST00000367196 FRYLO94915 3013 aa15.82■□□□□ 0.12
CTSD-202ENST00000367196 DMXL1Q9Y485 3027 aa15.82■□□□□ 0.12
CTSD-202ENST00000367196 NFATC1O95644 943 aa15.81■□□□□ 0.12
CTSD-202ENST00000367196 P4HA1P13674 534 aa15.81■□□□□ 0.12
CTSD-202ENST00000367196 ARSAP15289 507 aa15.81■□□□□ 0.12
CTSD-202ENST00000367196 TRIM21P19474 475 aaKnown RBP15.81■□□□□ 0.12
CTSD-202ENST00000367196 PSMD2Q13200 908 aa15.81■□□□□ 0.12
CTSD-202ENST00000367196 BIRC3Q13489 604 aa15.81■□□□□ 0.12
CTSD-202ENST00000367196 CUL4BQ13620 913 aa15.81■□□□□ 0.12
CTSD-202ENST00000367196 HEATR6Q6AI08 1181 aaKnown RBP15.81■□□□□ 0.12
CTSD-202ENST00000367196 SCARA3Q6AZY7 606 aa15.81■□□□□ 0.12
CTSD-202ENST00000367196 FSTL4Q6MZW2 842 aa15.81■□□□□ 0.12
CTSD-202ENST00000367196 CAMKK1Q8N5S9 505 aa15.81■□□□□ 0.12
CTSD-202ENST00000367196 ARL14EPQ8N8R7 260 aaPredicted RBP15.81■□□□□ 0.12
CTSD-202ENST00000367196 B3GALNT2Q8NCR0 500 aa15.81■□□□□ 0.12
CTSD-202ENST00000367196 SH3RF2Q8TEC5 729 aa15.81■□□□□ 0.12
CTSD-202ENST00000367196 CD101Q93033 1021 aa15.81■□□□□ 0.12
CTSD-202ENST00000367196 ACDQ96AP0 544 aa15.81■□□□□ 0.12
CTSD-202ENST00000367196 SLITRK1Q96PX8 696 aa15.81■□□□□ 0.12
CTSD-202ENST00000367196 MRPL45Q9BRJ2 306 aaKnown RBP15.81■□□□□ 0.12
CTSD-202ENST00000367196 RTKNQ9BST9 563 aa15.81■□□□□ 0.12
CTSD-202ENST00000367196 TTLL2Q9BWV7 592 aa15.81■□□□□ 0.12
CTSD-202ENST00000367196 GCNT4Q9P109 453 aa15.81■□□□□ 0.12
CTSD-202ENST00000367196 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.8■□□□□ 0.12
CTSD-202ENST00000367196 RNF40O75150 1001 aa15.8■□□□□ 0.12
CTSD-202ENST00000367196 AKAP3O75969 853 aa15.8■□□□□ 0.12
CTSD-202ENST00000367196 KIF20AO95235 890 aa15.8■□□□□ 0.12
CTSD-202ENST00000367196 CST3P01034 146 aaPredicted RBP15.8■□□□□ 0.12
CTSD-202ENST00000367196 PTPN1P18031 435 aaKnown RBP15.8■□□□□ 0.12
CTSD-202ENST00000367196 GJA4P35212 333 aa15.8■□□□□ 0.12
CTSD-202ENST00000367196 DMWDQ09019 674 aa15.8■□□□□ 0.12
CTSD-202ENST00000367196 SPEM2Q0P670 501 aa15.8■□□□□ 0.12
CTSD-202ENST00000367196 ZNF699Q32M78 642 aa15.8■□□□□ 0.12
CTSD-202ENST00000367196 EML3Q32P44 896 aa15.8■□□□□ 0.12
CTSD-202ENST00000367196 TDRD10Q5VZ19 366 aaKnown RBP15.8■□□□□ 0.12
CTSD-202ENST00000367196 DDX42Q86XP3 938 aaKnown RBP eCLIP15.8■□□□□ 0.12
CTSD-202ENST00000367196 PDZD8Q8NEN9 1154 aa15.8■□□□□ 0.12
CTSD-202ENST00000367196 TMEM174Q8WUU8 243 aa15.8■□□□□ 0.12
CTSD-202ENST00000367196 CCDC47Q96A33 483 aaKnown RBP15.8■□□□□ 0.12
CTSD-202ENST00000367196 TNIP3Q96KP6 325 aa15.8■□□□□ 0.12
CTSD-202ENST00000367196 CYP2S1Q96SQ9 504 aa15.8■□□□□ 0.12
CTSD-202ENST00000367196 VRTNQ9H8Y1 702 aa15.8■□□□□ 0.12
CTSD-202ENST00000367196 NXF1Q9UBU9 619 aaKnown RBP15.8■□□□□ 0.12
CTSD-202ENST00000367196 RCOR1Q9UKL0 485 aa15.8■□□□□ 0.12
CTSD-202ENST00000367196 WNT6Q9Y6F9 365 aa15.8■□□□□ 0.12
CTSD-202ENST00000367196 SPAG17Q6Q759 2223 aa15.79■□□□□ 0.12
CTSD-202ENST00000367196 RALGAPA1Q6GYQ0 2036 aa15.79■□□□□ 0.12
CTSD-202ENST00000367196 C2orf78A6NCI8 922 aa15.79■□□□□ 0.12
CTSD-202ENST00000367196 OTOL1A6NHN0 477 aaPredicted RBP15.79■□□□□ 0.12
CTSD-202ENST00000367196 F8VP50 259 aa15.79■□□□□ 0.12
CTSD-202ENST00000367196 SLC9A3R1O14745 358 aaPredicted RBP15.79■□□□□ 0.12
CTSD-202ENST00000367196 HRO43593 1189 aa15.79■□□□□ 0.12
CTSD-202ENST00000367196 RTN3O95197 1032 aaPredicted RBP15.79■□□□□ 0.12
CTSD-202ENST00000367196 EGFP01133 1207 aa15.79■□□□□ 0.12
CTSD-202ENST00000367196 CCDC192P0DO97 292 aa15.79■□□□□ 0.12
CTSD-202ENST00000367196 CASP1P29466 404 aa15.79■□□□□ 0.12
CTSD-202ENST00000367196 MYL6P60660 151 aa15.79■□□□□ 0.12
CTSD-202ENST00000367196 DNM1Q05193 864 aaKnown RBP15.79■□□□□ 0.12
CTSD-202ENST00000367196 CSRP2Q16527 193 aa15.79■□□□□ 0.12
CTSD-202ENST00000367196 ZNF667Q5HYK9 610 aa15.79■□□□□ 0.12
CTSD-202ENST00000367196 CACNA2D4Q7Z3S7 1137 aa15.79■□□□□ 0.12
CTSD-202ENST00000367196 SLC9A9Q8IVB4 645 aa15.79■□□□□ 0.12
CTSD-202ENST00000367196 RIN3Q8TB24 985 aa15.79■□□□□ 0.12
CTSD-202ENST00000367196 NETO1Q8TDF5 533 aa15.79■□□□□ 0.12
CTSD-202ENST00000367196 GAB3Q8WWW8 586 aa15.79■□□□□ 0.12
CTSD-202ENST00000367196 OVCA2Q8WZ82 227 aa15.79■□□□□ 0.12
CTSD-202ENST00000367196 LOXL4Q96JB6 756 aa15.79■□□□□ 0.12
CTSD-202ENST00000367196 SLC22A12Q96S37 553 aa15.79■□□□□ 0.12
CTSD-202ENST00000367196 SERTAD1Q9UHV2 236 aa15.79■□□□□ 0.12
CTSD-202ENST00000367196 ZNF840PA6NDX5 716 aa15.78■□□□□ 0.12
CTSD-202ENST00000367196 ACTN4O43707 911 aaKnown RBP15.78■□□□□ 0.12
CTSD-202ENST00000367196 RPP40O75818 363 aaKnown RBP15.78■□□□□ 0.12
CTSD-202ENST00000367196 TGM1P22735 817 aa15.78■□□□□ 0.12
CTSD-202ENST00000367196 GALK1P51570 392 aa15.78■□□□□ 0.12
CTSD-202ENST00000367196 CLDN10P78369 228 aa15.78■□□□□ 0.12
CTSD-202ENST00000367196 SLC7A9P82251 487 aa15.78■□□□□ 0.12
CTSD-202ENST00000367196 NCOA4Q13772 614 aa15.78■□□□□ 0.12
CTSD-202ENST00000367196 SYT13Q7L8C5 426 aa15.78■□□□□ 0.12
CTSD-202ENST00000367196 PARD3BQ8TEW8 1205 aa15.78■□□□□ 0.12
CTSD-202ENST00000367196 CHFRQ96EP1 664 aa15.78■□□□□ 0.12
CTSD-202ENST00000367196 PAGE5Q96GU1 130 aa15.78■□□□□ 0.12
CTSD-202ENST00000367196 XYLT2Q9H1B5 865 aa15.78■□□□□ 0.12
CTSD-202ENST00000367196 SEMA4GQ9NTN9 838 aa15.78■□□□□ 0.12
CTSD-202ENST00000367196 FRMD4BQ9Y2L6 1034 aa15.78■□□□□ 0.12
CTSD-202ENST00000367196 LRRIQ3A6PVS8 624 aaPredicted RBP15.77■□□□□ 0.12
CTSD-202ENST00000367196 LEFTY2O00292 366 aa15.77■□□□□ 0.12
CTSD-202ENST00000367196 PDXKO00764 312 aa15.77■□□□□ 0.12
CTSD-202ENST00000367196 ABL1P00519 1130 aa15.77■□□□□ 0.12
CTSD-202ENST00000367196 RPN1P04843 607 aaKnown RBP15.77■□□□□ 0.12
CTSD-202ENST00000367196 CMA1P23946 247 aa15.77■□□□□ 0.12
CTSD-202ENST00000367196 YWHAQP27348 245 aa15.77■□□□□ 0.12
CTSD-202ENST00000367196 USP46P62068 366 aa15.77■□□□□ 0.12
CTSD-202ENST00000367196 KRT85P78386 507 aa15.77■□□□□ 0.12
CTSD-202ENST00000367196 STK4Q13043 487 aa15.77■□□□□ 0.12
CTSD-202ENST00000367196 SRSF5Q13243 272 aaKnown RBP15.77■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms