RNA–Protein interactions for RNA: ENST00000367042.5

CD46-208, Transcript of CD46 molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD46, Length 3,326 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-208ENST00000367042 SERAC1Q96JX3 654 aa8.55□□□□□ -1.04
CD46-208ENST00000367042 ANKRD27Q96NW4 1050 aa8.55□□□□□ -1.04
CD46-208ENST00000367042 CYP26B1Q9NR63 512 aa8.55□□□□□ -1.04
CD46-208ENST00000367042 NDE1Q9NXR1 346 aa8.55□□□□□ -1.04
CD46-208ENST00000367042 EURLQ9NYK6 297 aa8.55□□□□□ -1.04
CD46-208ENST00000367042 TJP2Q9UDY2 1190 aa8.55□□□□□ -1.04
CD46-208ENST00000367042 ANGPTL2Q9UKU9 493 aa8.55□□□□□ -1.04
CD46-208ENST00000367042 TMEM191CA6NGB0 347 aa8.55□□□□□ -1.04
CD46-208ENST00000367042 CYB561D2O14569 222 aa8.55□□□□□ -1.04
CD46-208ENST00000367042 TM9SF1O15321 606 aa8.55□□□□□ -1.04
CD46-208ENST00000367042 HNRNPCL1O60812 293 aaKnown RBP8.55□□□□□ -1.04
CD46-208ENST00000367042 VNN1O95497 513 aa8.55□□□□□ -1.04
CD46-208ENST00000367042 CST3P01034 146 aaPredicted RBP8.55□□□□□ -1.04
CD46-208ENST00000367042 NR3C2P08235 984 aa8.55□□□□□ -1.04
CD46-208ENST00000367042 RAP1GAPP47736 663 aa8.55□□□□□ -1.04
CD46-208ENST00000367042 CDH6P55285 790 aa8.55□□□□□ -1.04
CD46-208ENST00000367042 PIGHQ14442 188 aaPredicted RBP8.55□□□□□ -1.04
CD46-208ENST00000367042 TAF5Q15542 800 aa8.55□□□□□ -1.04
CD46-208ENST00000367042 IRGCQ6NXR0 463 aa8.55□□□□□ -1.04
CD46-208ENST00000367042 TDRPQ86YL5 185 aa8.55□□□□□ -1.04
CD46-208ENST00000367042 CCDC60Q8IWA6 550 aaPredicted RBP8.55□□□□□ -1.04
CD46-208ENST00000367042 POU5F2Q8N7G0 328 aa8.55□□□□□ -1.04
CD46-208ENST00000367042 SLC26A7Q8TE54 656 aa8.55□□□□□ -1.04
CD46-208ENST00000367042 MTBPQ96DY7 904 aa8.55□□□□□ -1.04
CD46-208ENST00000367042 SRPK1Q96SB4 655 aaKnown RBP8.55□□□□□ -1.04
CD46-208ENST00000367042 APOL6Q9BWW8 343 aa8.55□□□□□ -1.04
CD46-208ENST00000367042 ACSS3Q9H6R3 686 aa8.55□□□□□ -1.04
CD46-208ENST00000367042 RNF146Q9NTX7 359 aa8.55□□□□□ -1.04
CD46-208ENST00000367042 DDX56Q9NY93 547 aaKnown RBP8.55□□□□□ -1.04
CD46-208ENST00000367042 TCRBV9S1A1TA0A576 114 aa8.55□□□□□ -1.04
CD46-208ENST00000367042 C4BPAP04003 597 aaKnown RBP8.55□□□□□ -1.04
CD46-208ENST00000367042 MMP8P22894 467 aa8.55□□□□□ -1.04
CD46-208ENST00000367042 POLR2BP30876 1174 aaKnown RBP8.55□□□□□ -1.04
CD46-208ENST00000367042 TNFSF9P41273 254 aa8.55□□□□□ -1.04
CD46-208ENST00000367042 CDKN2BP42772 138 aa8.55□□□□□ -1.04
CD46-208ENST00000367042 HSD17B4P51659 736 aa8.55□□□□□ -1.04
CD46-208ENST00000367042 NEK3P51956 506 aa8.55□□□□□ -1.04
CD46-208ENST00000367042 MCL1Q07820 350 aa8.55□□□□□ -1.04
CD46-208ENST00000367042 MMRN1Q13201 1228 aa8.55□□□□□ -1.04
CD46-208ENST00000367042 KRT81Q14533 505 aa8.55□□□□□ -1.04
CD46-208ENST00000367042 EMC2Q15006 297 aa8.55□□□□□ -1.04
CD46-208ENST00000367042 PPP1R15BQ5SWA1 713 aa8.55□□□□□ -1.04
CD46-208ENST00000367042 PHF13Q86YI8 300 aaPredicted RBP8.55□□□□□ -1.04
CD46-208ENST00000367042 CRLF3Q8IUI8 442 aa8.55□□□□□ -1.04
CD46-208ENST00000367042 JOSD2Q8TAC2 188 aa8.55□□□□□ -1.04
CD46-208ENST00000367042 NRG4Q8WWG1 115 aa8.55□□□□□ -1.04
CD46-208ENST00000367042 ALKBH8Q96BT7 664 aaKnown RBP8.55□□□□□ -1.04
CD46-208ENST00000367042 ZNF184Q99676 751 aaPredicted RBP8.55□□□□□ -1.04
CD46-208ENST00000367042 VPS11Q9H270 941 aa8.55□□□□□ -1.04
CD46-208ENST00000367042 ST6GALNAC4Q9H4F1 302 aa8.55□□□□□ -1.04
CD46-208ENST00000367042 JPH1Q9HDC5 661 aaPredicted RBP8.55□□□□□ -1.04
CD46-208ENST00000367042 CISHQ9NSE2 258 aa8.55□□□□□ -1.04
CD46-208ENST00000367042 COL11A2P13942 1736 aaPredicted RBP8.55□□□□□ -1.04
CD46-208ENST00000367042 PMM2O15305 246 aa8.54□□□□□ -1.04
CD46-208ENST00000367042 KCNN4O15554 427 aa8.54□□□□□ -1.04
CD46-208ENST00000367042 KRT37O76014 449 aa8.54□□□□□ -1.04
CD46-208ENST00000367042 ETS2P15036 469 aa8.54□□□□□ -1.04
CD46-208ENST00000367042 CCND2P30279 289 aa8.54□□□□□ -1.04
CD46-208ENST00000367042 CCNG1P51959 295 aa8.54□□□□□ -1.04
CD46-208ENST00000367042 ROR1Q01973 937 aa8.54□□□□□ -1.04
CD46-208ENST00000367042 PTP4A2Q12974 167 aa8.54□□□□□ -1.04
CD46-208ENST00000367042 PSMD6Q15008 389 aa8.54□□□□□ -1.04
CD46-208ENST00000367042 OASLQ15646 514 aaKnown RBP8.54□□□□□ -1.04
CD46-208ENST00000367042 ZNF699Q32M78 642 aa8.54□□□□□ -1.04
CD46-208ENST00000367042 PPP6R3Q5H9R7 873 aaPredicted RBP8.54□□□□□ -1.04
CD46-208ENST00000367042 EEPD1Q7L9B9 569 aa8.54□□□□□ -1.04
CD46-208ENST00000367042 SCUBE1Q8IWY4 988 aa8.54□□□□□ -1.04
CD46-208ENST00000367042 ENDOVQ8N8Q3 282 aaKnown RBP8.54□□□□□ -1.04
CD46-208ENST00000367042 BANPQ8N9N5 519 aa8.54□□□□□ -1.04
CD46-208ENST00000367042 FBXO27Q8NI29 283 aa8.54□□□□□ -1.04
CD46-208ENST00000367042 FAM151AQ8WW52 585 aa8.54□□□□□ -1.04
CD46-208ENST00000367042 CLEC4DQ8WXI8 215 aa8.54□□□□□ -1.04
CD46-208ENST00000367042 E2F7Q96AV8 911 aa8.54□□□□□ -1.04
CD46-208ENST00000367042 PXMP2Q9NR77 195 aa8.54□□□□□ -1.04
CD46-208ENST00000367042 ZNF541Q9H0D2 1346 aa8.54□□□□□ -1.04
CD46-208ENST00000367042 FOCADQ5VW36 1801 aa8.54□□□□□ -1.04
CD46-208ENST00000367042 LOC100653049A0A140TA62 436 aa8.54□□□□□ -1.04
CD46-208ENST00000367042 SPDYE2BA6NHP3 402 aa8.54□□□□□ -1.04
CD46-208ENST00000367042 AHCYL1O43865 530 aa8.54□□□□□ -1.04
CD46-208ENST00000367042 DKC1O60832 514 aaKnown RBP eCLIP8.54□□□□□ -1.04
CD46-208ENST00000367042 KRT34O76011 436 aa8.54□□□□□ -1.04
CD46-208ENST00000367042 ITGAVP06756 1048 aa8.54□□□□□ -1.04
CD46-208ENST00000367042 KRT7P08729 469 aa8.54□□□□□ -1.04
CD46-208ENST00000367042 SPDYE6P0CI01 402 aa8.54□□□□□ -1.04
CD46-208ENST00000367042 ACO1P21399 889 aaKnown RBP8.54□□□□□ -1.04
CD46-208ENST00000367042 AP2B1P63010 937 aa8.54□□□□□ -1.04
CD46-208ENST00000367042 ZNF252P-AS1Q0IIN9 211 aa8.54□□□□□ -1.04
CD46-208ENST00000367042 BST1Q10588 318 aa8.54□□□□□ -1.04
CD46-208ENST00000367042 UBAP2LQ14157 1087 aaKnown RBP8.54□□□□□ -1.04
CD46-208ENST00000367042 LGSNQ5TDP6 509 aa8.54□□□□□ -1.04
CD46-208ENST00000367042 ADGRD1Q6QNK2 874 aa8.54□□□□□ -1.04
CD46-208ENST00000367042 RELL1Q8IUW5 271 aa8.54□□□□□ -1.04
CD46-208ENST00000367042 IGDCC3Q8IVU1 814 aa8.54□□□□□ -1.04
CD46-208ENST00000367042 NDUFAF2Q8N183 169 aa8.54□□□□□ -1.04
CD46-208ENST00000367042 EFCAB3Q8N7B9 438 aa8.54□□□□□ -1.04
CD46-208ENST00000367042 RBM15BQ8NDT2 890 aaKnown RBP8.54□□□□□ -1.04
CD46-208ENST00000367042 AGR3Q8TD06 166 aa8.54□□□□□ -1.04
CD46-208ENST00000367042 PYDC1Q8WXC3 89 aa8.54□□□□□ -1.04
CD46-208ENST00000367042 AKT1S1Q96B36 256 aa8.54□□□□□ -1.04
CD46-208ENST00000367042 APOPT1Q96IL0 206 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 79.7 ms