RNA–Protein interactions for RNA: ENST00000366735.5

MRPL55-209, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRPL55, Length 1,212 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-209ENST00000366735 DPH6Q7L8W6 267 aa13.27□□□□□ -0.29
MRPL55-209ENST00000366735 SCN4BQ8IWT1 228 aa13.27□□□□□ -0.29
MRPL55-209ENST00000366735 CCDC65Q8IXS2 484 aa13.27□□□□□ -0.29
MRPL55-209ENST00000366735 GPD1LQ8N335 351 aa13.27□□□□□ -0.29
MRPL55-209ENST00000366735 TTC16Q8NEE8 873 aa13.27□□□□□ -0.29
MRPL55-209ENST00000366735 RPLP0P6Q8NHW5 317 aa13.27□□□□□ -0.29
MRPL55-209ENST00000366735 ZC3H10Q96K80 434 aaKnown RBP13.27□□□□□ -0.29
MRPL55-209ENST00000366735 STRA6Q9BX79 667 aa13.27□□□□□ -0.29
MRPL55-209ENST00000366735 LRRC27Q9C0I9 530 aa13.27□□□□□ -0.29
MRPL55-209ENST00000366735 GZF1Q9H116 711 aaPredicted RBP13.27□□□□□ -0.29
MRPL55-209ENST00000366735 ECT2Q9H8V3 914 aa13.27□□□□□ -0.29
MRPL55-209ENST00000366735 VPS45Q9NRW7 570 aa13.27□□□□□ -0.29
MRPL55-209ENST00000366735 TMLHEQ9NVH6 421 aa13.27□□□□□ -0.29
MRPL55-209ENST00000366735 C2orf42Q9NWW7 574 aa13.27□□□□□ -0.29
MRPL55-209ENST00000366735 TBC1D7Q9P0N9 293 aa13.27□□□□□ -0.29
MRPL55-209ENST00000366735 ANGPTL2Q9UKU9 493 aa13.27□□□□□ -0.29
MRPL55-209ENST00000366735 SRPRBQ9Y5M8 271 aaKnown RBP13.27□□□□□ -0.29
MRPL55-209ENST00000366735 FAM237AA0A1B0GTK4 181 aa13.26□□□□□ -0.29
MRPL55-209ENST00000366735 MYMKA6NI61 221 aa13.26□□□□□ -0.29
MRPL55-209ENST00000366735 GDF9O60383 454 aa13.26□□□□□ -0.29
MRPL55-209ENST00000366735 CUTAO60888 179 aa13.26□□□□□ -0.29
MRPL55-209ENST00000366735 TADA3O75528 432 aa13.26□□□□□ -0.29
MRPL55-209ENST00000366735 LETM1O95202 739 aaPredicted RBP13.26□□□□□ -0.29
MRPL55-209ENST00000366735 ARSAP15289 507 aa13.26□□□□□ -0.29
MRPL55-209ENST00000366735 TCF3P15923 654 aa13.26□□□□□ -0.29
MRPL55-209ENST00000366735 CMA1P23946 247 aa13.26□□□□□ -0.29
MRPL55-209ENST00000366735 ACAT1P24752 427 aaKnown RBP13.26□□□□□ -0.29
MRPL55-209ENST00000366735 CYP2F1P24903 491 aa13.26□□□□□ -0.29
MRPL55-209ENST00000366735 PXNP49023 591 aaPredicted RBP13.26□□□□□ -0.29
MRPL55-209ENST00000366735 DDR2Q16832 855 aa13.26□□□□□ -0.29
MRPL55-209ENST00000366735 ZSCAN23Q3MJ62 389 aa13.26□□□□□ -0.29
MRPL55-209ENST00000366735 SDHAF4Q5VUM1 108 aa13.26□□□□□ -0.29
MRPL55-209ENST00000366735 PKN3Q6P5Z2 889 aa13.26□□□□□ -0.29
MRPL55-209ENST00000366735 VSTM1Q6UX27 236 aa13.26□□□□□ -0.29
MRPL55-209ENST00000366735 KBTBD6Q86V97 674 aa13.26□□□□□ -0.29
MRPL55-209ENST00000366735 DNAJC19Q96DA6 116 aa13.26□□□□□ -0.29
MRPL55-209ENST00000366735 HHIPQ96QV1 700 aa13.26□□□□□ -0.29
MRPL55-209ENST00000366735 MTMR12Q9C0I1 747 aa13.26□□□□□ -0.29
MRPL55-209ENST00000366735 KIAA1586Q9HCI6 787 aa13.26□□□□□ -0.29
MRPL55-209ENST00000366735 PANK4Q9NVE7 773 aa13.26□□□□□ -0.29
MRPL55-209ENST00000366735 MAGEC2Q9UBF1 373 aaPredicted RBP13.26□□□□□ -0.29
MRPL55-209ENST00000366735 GTF3C4Q9UKN8 822 aa13.26□□□□□ -0.29
MRPL55-209ENST00000366735 CDH9Q9ULB4 789 aa13.26□□□□□ -0.29
MRPL55-209ENST00000366735 TNRC6BQ9UPQ9 1833 aaKnown RBP13.26□□□□□ -0.29
MRPL55-209ENST00000366735 PPP3CCP48454 512 aa13.25□□□□□ -0.29
MRPL55-209ENST00000366735 GALK1P51570 392 aa13.25□□□□□ -0.29
MRPL55-209ENST00000366735 DMC1Q14565 340 aa13.25□□□□□ -0.29
MRPL55-209ENST00000366735 SF3A2Q15428 464 aaKnown RBP13.25□□□□□ -0.29
MRPL55-209ENST00000366735 KIAA1958Q8N8K9 716 aa13.25□□□□□ -0.29
MRPL55-209ENST00000366735 STKLD1Q8NE28 680 aa13.25□□□□□ -0.29
MRPL55-209ENST00000366735 ENGASEQ8NFI3 743 aa13.25□□□□□ -0.29
MRPL55-209ENST00000366735 TSTD1Q8NFU3 115 aa13.25□□□□□ -0.29
MRPL55-209ENST00000366735 SPATA17Q96L03 361 aa13.25□□□□□ -0.29
MRPL55-209ENST00000366735 SYT15Q9BQS2 421 aa13.25□□□□□ -0.29
MRPL55-209ENST00000366735 EBF1Q9UH73 591 aa13.25□□□□□ -0.29
MRPL55-209ENST00000366735 FBXO2Q9UK22 296 aaPredicted RBP13.25□□□□□ -0.29
MRPL55-209ENST00000366735 ARHGAP26Q9UNA1 814 aa13.25□□□□□ -0.29
MRPL55-209ENST00000366735 WNT6Q9Y6F9 365 aa13.25□□□□□ -0.29
MRPL55-209ENST00000366735 ACACBO00763 2458 aa13.25□□□□□ -0.29
MRPL55-209ENST00000366735 MYOFQ9NZM1 2061 aa13.25□□□□□ -0.29
MRPL55-209ENST00000366735 FRMD3A2A2Y4 597 aa13.24□□□□□ -0.29
MRPL55-209ENST00000366735 GOLGA8IPA6NC78 632 aa13.24□□□□□ -0.29
MRPL55-209ENST00000366735 OTOL1A6NHN0 477 aaPredicted RBP13.24□□□□□ -0.29
MRPL55-209ENST00000366735 ZNF233A6NK53 670 aa13.24□□□□□ -0.29
MRPL55-209ENST00000366735 GOLGA8JA6NMD2 632 aa13.24□□□□□ -0.29
MRPL55-209ENST00000366735 SLC9A3R1O14745 358 aaPredicted RBP13.24□□□□□ -0.29
MRPL55-209ENST00000366735 GABRDO14764 452 aa13.24□□□□□ -0.29
MRPL55-209ENST00000366735 HDCP19113 662 aa13.24□□□□□ -0.29
MRPL55-209ENST00000366735 GBP1P32455 592 aa13.24□□□□□ -0.29
MRPL55-209ENST00000366735 GRIK1P39086 918 aa13.24□□□□□ -0.29
MRPL55-209ENST00000366735 KCNA1Q09470 495 aa13.24□□□□□ -0.29
MRPL55-209ENST00000366735 DUOXA2Q1HG44 320 aa13.24□□□□□ -0.29
MRPL55-209ENST00000366735 EML3Q32P44 896 aa13.24□□□□□ -0.29
MRPL55-209ENST00000366735 PLA2G2CQ5R387 149 aa13.24□□□□□ -0.29
MRPL55-209ENST00000366735 STPG1Q5TH74 334 aa13.24□□□□□ -0.29
MRPL55-209ENST00000366735 RNF43Q68DV7 783 aa13.24□□□□□ -0.29
MRPL55-209ENST00000366735 DENND5BQ6ZUT9 1274 aa13.24□□□□□ -0.29
MRPL55-209ENST00000366735 USP49Q70CQ1 688 aa13.24□□□□□ -0.29
MRPL55-209ENST00000366735 DDX42Q86XP3 938 aaKnown RBP eCLIP13.24□□□□□ -0.29
MRPL55-209ENST00000366735 WDR49Q8IV35 697 aa13.24□□□□□ -0.29
MRPL55-209ENST00000366735 SH3RF2Q8TEC5 729 aa13.24□□□□□ -0.29
MRPL55-209ENST00000366735 CHFRQ96EP1 664 aa13.24□□□□□ -0.29
MRPL55-209ENST00000366735 HPDLQ96IR7 371 aa13.24□□□□□ -0.29
MRPL55-209ENST00000366735 PKMYT1Q99640 499 aa13.24□□□□□ -0.29
MRPL55-209ENST00000366735 CBWD1Q9BRT8 395 aa13.24□□□□□ -0.29
MRPL55-209ENST00000366735 TMUB1Q9BVT8 246 aa13.24□□□□□ -0.29
MRPL55-209ENST00000366735 IKZF4Q9H2S9 585 aa13.24□□□□□ -0.29
MRPL55-209ENST00000366735 PDE11AQ9HCR9 933 aa13.24□□□□□ -0.29
MRPL55-209ENST00000366735 INTS13Q9NVM9 706 aa13.24□□□□□ -0.29
MRPL55-209ENST00000366735 TRPM5Q9NZQ8 1165 aa13.24□□□□□ -0.29
MRPL55-209ENST00000366735 CNOT1A5YKK6 2376 aaKnown RBP13.23□□□□□ -0.29
MRPL55-209ENST00000366735 ALDH1A2O94788 518 aa13.23□□□□□ -0.29
MRPL55-209ENST00000366735 PRPF6O94906 941 aaKnown RBP13.23□□□□□ -0.29
MRPL55-209ENST00000366735 CASP5P51878 434 aa13.23□□□□□ -0.29
MRPL55-209ENST00000366735 DGKEP52429 567 aa13.23□□□□□ -0.29
MRPL55-209ENST00000366735 AMPD3Q01432 767 aa13.23□□□□□ -0.29
MRPL55-209ENST00000366735 CYP27A1Q02318 531 aa13.23□□□□□ -0.29
MRPL55-209ENST00000366735 CREB5Q02930 508 aa13.23□□□□□ -0.29
MRPL55-209ENST00000366735 CCDC6Q16204 474 aa13.23□□□□□ -0.29
MRPL55-209ENST00000366735 SOWAHAQ2M3V2 549 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms