RNA–Protein interactions for RNA: ENST00000366290.2

YBX3-204, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 512 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-204ENST00000366290 TAPT1Q6NXT6 567 aa8.84□□□□□ -0.99
YBX3-204ENST00000366290 APOA5Q6Q788 366 aa8.84□□□□□ -0.99
YBX3-204ENST00000366290 UNQ6494/PRO21346Q6UXR6 183 aa8.84□□□□□ -0.99
YBX3-204ENST00000366290 SLC30A10Q6XR72 485 aa8.84□□□□□ -0.99
YBX3-204ENST00000366290 CATIPQ7Z7H3 387 aa8.84□□□□□ -0.99
YBX3-204ENST00000366290 RAB11FIP4Q86YS3 637 aa8.84□□□□□ -0.99
YBX3-204ENST00000366290 TDHQ8IZJ6 230 aa8.84□□□□□ -0.99
YBX3-204ENST00000366290 DEFB123Q8N688 67 aa8.84□□□□□ -0.99
YBX3-204ENST00000366290 LINC00482Q8N8I6 264 aa8.84□□□□□ -0.99
YBX3-204ENST00000366290 KYQ8NBH2 561 aa8.84□□□□□ -0.99
YBX3-204ENST00000366290 WDR48Q8TAF3 677 aa8.84□□□□□ -0.99
YBX3-204ENST00000366290 LZTS2Q9BRK4 669 aa8.84□□□□□ -0.99
YBX3-204ENST00000366290 SPZ1Q9BXG8 430 aa8.84□□□□□ -0.99
YBX3-204ENST00000366290 UPF2Q9HAU5 1272 aaKnown RBP8.84□□□□□ -0.99
YBX3-204ENST00000366290 PDRG1Q9NUG6 133 aa8.84□□□□□ -0.99
YBX3-204ENST00000366290 ZHX1Q9UKY1 873 aaPredicted RBP8.84□□□□□ -0.99
YBX3-204ENST00000366290 MRPL11Q9Y3B7 192 aaKnown RBP8.84□□□□□ -0.99
YBX3-204ENST00000366290 NID2Q14112 1375 aa8.84□□□□□ -0.99
YBX3-204ENST00000366290 PRUNE2Q8WUY3 3088 aa8.83□□□□□ -1
YBX3-204ENST00000366290 LTBP2Q14767 1821 aa8.83□□□□□ -1
YBX3-204ENST00000366290 ETV2O00321 342 aaPredicted RBP8.83□□□□□ -1
YBX3-204ENST00000366290 PGK1P00558 417 aa8.83□□□□□ -1
YBX3-204ENST00000366290 KRT1P04264 644 aa8.83□□□□□ -1
YBX3-204ENST00000366290 CALM1P0DP23 149 aa8.83□□□□□ -1
YBX3-204ENST00000366290 CALM2P0DP24 149 aa8.83□□□□□ -1
YBX3-204ENST00000366290 CALM3P0DP25 149 aa8.83□□□□□ -1
YBX3-204ENST00000366290 CCND1P24385 295 aa8.83□□□□□ -1
YBX3-204ENST00000366290 APEX1P27695 318 aaKnown RBP8.83□□□□□ -1
YBX3-204ENST00000366290 KIF5BP33176 963 aa8.83□□□□□ -1
YBX3-204ENST00000366290 HSD17B4P51659 736 aa8.83□□□□□ -1
YBX3-204ENST00000366290 ACLYP53396 1101 aa8.83□□□□□ -1
YBX3-204ENST00000366290 TNFAIP2Q03169 654 aa8.83□□□□□ -1
YBX3-204ENST00000366290 PIN1Q13526 163 aaPredicted RBP8.83□□□□□ -1
YBX3-204ENST00000366290 NOLC1Q14978 699 aaKnown RBP eCLIP8.83□□□□□ -1
YBX3-204ENST00000366290 RABEP1Q15276 862 aa8.83□□□□□ -1
YBX3-204ENST00000366290 STILQ15468 1287 aa8.83□□□□□ -1
YBX3-204ENST00000366290 NFE2Q16621 373 aaPredicted RBP8.83□□□□□ -1
YBX3-204ENST00000366290 UGT8Q16880 541 aa8.83□□□□□ -1
YBX3-204ENST00000366290 USH1GQ495M9 461 aa8.83□□□□□ -1
YBX3-204ENST00000366290 PITRM1Q5JRX3 1037 aa8.83□□□□□ -1
YBX3-204ENST00000366290 SLC39A5Q6ZMH5 540 aa8.83□□□□□ -1
YBX3-204ENST00000366290 STPG3Q8N7X2 389 aa8.83□□□□□ -1
YBX3-204ENST00000366290 PCSK9Q8NBP7 692 aaKnown RBP8.83□□□□□ -1
YBX3-204ENST00000366290 ZBTB8AQ96BR9 441 aa8.83□□□□□ -1
YBX3-204ENST00000366290 SLC38A3Q99624 504 aa8.83□□□□□ -1
YBX3-204ENST00000366290 WNT8AQ9H1J5 351 aa8.83□□□□□ -1
YBX3-204ENST00000366290 KCND1Q9NSA2 647 aa8.83□□□□□ -1
YBX3-204ENST00000366290 CROTQ9UKG9 612 aa8.83□□□□□ -1
YBX3-204ENST00000366290 TPCN1Q9ULQ1 816 aa8.83□□□□□ -1
YBX3-204ENST00000366290 STXBP5LQ9Y2K9 1186 aa8.83□□□□□ -1
YBX3-204ENST00000366290 SCN10AQ9Y5Y9 1956 aa8.82□□□□□ -1
YBX3-204ENST00000366290 ELP1O95163 1332 aa8.82□□□□□ -1
YBX3-204ENST00000366290 KLF18A0A0U1RQI7 1052 aa8.82□□□□□ -1
YBX3-204ENST00000366290 C11orf97A0A1B0GVM6 126 aaPredicted RBP8.82□□□□□ -1
YBX3-204ENST00000366290 MYADML2A6NDP7 307 aa8.82□□□□□ -1
YBX3-204ENST00000366290 CCDC69A6NI79 296 aa8.82□□□□□ -1
YBX3-204ENST00000366290 B4DLN1 442 aa8.82□□□□□ -1
YBX3-204ENST00000366290 PLEKHA8P1O95397 391 aa8.82□□□□□ -1
YBX3-204ENST00000366290 LARGE1O95461 756 aa8.82□□□□□ -1
YBX3-204ENST00000366290 CALML3P27482 149 aa8.82□□□□□ -1
YBX3-204ENST00000366290 PDIA3P30101 505 aaKnown RBP8.82□□□□□ -1
YBX3-204ENST00000366290 MRPL12P52815 198 aaKnown RBP8.82□□□□□ -1
YBX3-204ENST00000366290 RCAN1P53805 252 aa8.82□□□□□ -1
YBX3-204ENST00000366290 BCAR1P56945 870 aa8.82□□□□□ -1
YBX3-204ENST00000366290 KRT85P78386 507 aa8.82□□□□□ -1
YBX3-204ENST00000366290 ST3GAL1Q11201 340 aa8.82□□□□□ -1
YBX3-204ENST00000366290 SMAD4Q13485 552 aaKnown RBP8.82□□□□□ -1
YBX3-204ENST00000366290 CLUL1Q15846 466 aa8.82□□□□□ -1
YBX3-204ENST00000366290 KCNA10Q16322 511 aa8.82□□□□□ -1
YBX3-204ENST00000366290 CPEB4Q17RY0 729 aaKnown RBP eCLIP8.82□□□□□ -1
YBX3-204ENST00000366290 DUSP28Q4G0W2 176 aa8.82□□□□□ -1
YBX3-204ENST00000366290 KANK2Q63ZY3 851 aa8.82□□□□□ -1
YBX3-204ENST00000366290 SYDE1Q6ZW31 735 aaPredicted RBP8.82□□□□□ -1
YBX3-204ENST00000366290 ANKRD33Q7Z3H0 272 aa8.82□□□□□ -1
YBX3-204ENST00000366290 MICU3Q86XE3 530 aa8.82□□□□□ -1
YBX3-204ENST00000366290 FBXO16Q8IX29 292 aaPredicted RBP8.82□□□□□ -1
YBX3-204ENST00000366290 TMEFF1Q8IYR6 380 aa8.82□□□□□ -1
YBX3-204ENST00000366290 CTCFLQ8NI51 663 aaPredicted RBP8.82□□□□□ -1
YBX3-204ENST00000366290 NSUN6Q8TEA1 469 aaKnown RBP8.82□□□□□ -1
YBX3-204ENST00000366290 NUP133Q8WUM0 1156 aa8.82□□□□□ -1
YBX3-204ENST00000366290 SIGLEC10Q96LC7 697 aa8.82□□□□□ -1
YBX3-204ENST00000366290 TOX2Q96NM4 488 aa8.82□□□□□ -1
YBX3-204ENST00000366290 IWS1Q96ST2 819 aa8.82□□□□□ -1
YBX3-204ENST00000366290 MPHOSPH6Q99547 160 aaKnown RBP8.82□□□□□ -1
YBX3-204ENST00000366290 QRSL1Q9H0R6 528 aaKnown RBP8.82□□□□□ -1
YBX3-204ENST00000366290 DNAJC28Q9NX36 388 aa8.82□□□□□ -1
YBX3-204ENST00000366290 COL20A1Q9P218 1284 aa8.82□□□□□ -1
YBX3-204ENST00000366290 EDARQ9UNE0 448 aa8.82□□□□□ -1
YBX3-204ENST00000366290 PCDHA1Q9Y5I3 950 aa8.82□□□□□ -1
YBX3-204ENST00000366290 IRAK3Q9Y616 596 aa8.82□□□□□ -1
YBX3-204ENST00000366290 PMF1-BGLAPU3KQ54 211 aa8.82□□□□□ -1
YBX3-204ENST00000366290 E2F8A0AVK6 867 aa8.81□□□□□ -1
YBX3-204ENST00000366290 DBX1A6NMT0 343 aa8.81□□□□□ -1
YBX3-204ENST00000366290 ZBTB43O43298 467 aa8.81□□□□□ -1
YBX3-204ENST00000366290 DHX16O60231 1041 aaKnown RBP8.81□□□□□ -1
YBX3-204ENST00000366290 SNUPNO95149 360 aaKnown RBP8.81□□□□□ -1
YBX3-204ENST00000366290 TSPAN15O95858 294 aa8.81□□□□□ -1
YBX3-204ENST00000366290 PLA2G1BP04054 148 aaKnown RBP8.81□□□□□ -1
YBX3-204ENST00000366290 LPLP06858 475 aa8.81□□□□□ -1
YBX3-204ENST00000366290 GLDCP23378 1020 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms